Capybara microvirus Cap3_SP_379

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.62

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W8G3|A0A4P8W8G3_9VIRU Uncharacterized protein OS=Capybara microvirus Cap3_SP_379 OX=2585438 PE=4 SV=1
MM1 pKa = 7.71KK2 pKa = 10.63YY3 pKa = 10.17LVTSATIAHH12 pKa = 6.7YY13 pKa = 10.22DD14 pKa = 3.44SNMFEE19 pKa = 4.79SDD21 pKa = 3.11NEE23 pKa = 4.24EE24 pKa = 3.95NFKK27 pKa = 11.39AEE29 pKa = 3.79TDD31 pKa = 4.25DD32 pKa = 3.76IVTARR37 pKa = 11.84IIAHH41 pKa = 6.1TFAKK45 pKa = 10.15ILCDD49 pKa = 3.69YY50 pKa = 9.36EE51 pKa = 5.09NNIAGYY57 pKa = 10.06GEE59 pKa = 3.48IWEE62 pKa = 4.3EE63 pKa = 4.0NKK65 pKa = 10.49NKK67 pKa = 9.62QLEE70 pKa = 4.44SIEE73 pKa = 3.88EE74 pKa = 4.12KK75 pKa = 10.46IYY77 pKa = 10.32FKK79 pKa = 11.06PNN81 pKa = 2.84

Molecular weight: 9.46 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W4V1|A0A4P8W4V1_9VIRU Uncharacterized protein OS=Capybara microvirus Cap3_SP_379 OX=2585438 PE=4 SV=1
MM1 pKa = 7.81NYY3 pKa = 8.78MCLYY7 pKa = 8.77PRR9 pKa = 11.84KK10 pKa = 9.49IRR12 pKa = 11.84NPRR15 pKa = 11.84YY16 pKa = 9.51AAGNKK21 pKa = 9.32NGYY24 pKa = 7.52SQEE27 pKa = 3.98DD28 pKa = 3.9CKK30 pKa = 11.18DD31 pKa = 3.07KK32 pKa = 11.02RR33 pKa = 11.84KK34 pKa = 10.37LYY36 pKa = 10.21IQIDD40 pKa = 3.72CGNCEE45 pKa = 3.55EE46 pKa = 4.68CKK48 pKa = 9.97RR49 pKa = 11.84KK50 pKa = 9.64KK51 pKa = 10.36GKK53 pKa = 8.24WWTIRR58 pKa = 11.84IMEE61 pKa = 4.35EE62 pKa = 3.57LKK64 pKa = 10.51INKK67 pKa = 7.93GTFVTLTFSANSLIEE82 pKa = 3.87LTKK85 pKa = 10.68GEE87 pKa = 4.31KK88 pKa = 10.15VKK90 pKa = 10.64LANEE94 pKa = 4.23TATKK98 pKa = 9.97AVRR101 pKa = 11.84RR102 pKa = 11.84FLEE105 pKa = 4.37RR106 pKa = 11.84YY107 pKa = 8.17RR108 pKa = 11.84KK109 pKa = 9.55KK110 pKa = 9.76HH111 pKa = 4.03GHH113 pKa = 4.76SVKK116 pKa = 10.5HH117 pKa = 5.81ILITEE122 pKa = 4.66LGDD125 pKa = 3.49EE126 pKa = 4.6EE127 pKa = 5.06NEE129 pKa = 4.18HH130 pKa = 6.23TGRR133 pKa = 11.84LHH135 pKa = 6.07LHH137 pKa = 6.97GILFDD142 pKa = 4.49TITKK146 pKa = 10.57EE147 pKa = 4.17EE148 pKa = 4.36LNEE151 pKa = 3.57LWKK154 pKa = 11.19YY155 pKa = 11.04GFVDD159 pKa = 3.43TGNYY163 pKa = 9.34CNEE166 pKa = 3.61RR167 pKa = 11.84TANYY171 pKa = 5.56ITKK174 pKa = 10.58YY175 pKa = 9.97ILKK178 pKa = 9.92LDD180 pKa = 4.1KK181 pKa = 10.94NHH183 pKa = 7.12PNYY186 pKa = 9.15KK187 pKa = 9.98QKK189 pKa = 10.64IFVSAGLGKK198 pKa = 10.32NYY200 pKa = 9.82TEE202 pKa = 3.83QAQRR206 pKa = 11.84QKK208 pKa = 10.79NKK210 pKa = 10.27SYY212 pKa = 11.01RR213 pKa = 11.84FTNGCQFPLPTYY225 pKa = 9.62YY226 pKa = 10.48KK227 pKa = 9.83NKK229 pKa = 9.42VFSEE233 pKa = 4.37EE234 pKa = 3.83EE235 pKa = 4.09RR236 pKa = 11.84EE237 pKa = 4.32QMWTEE242 pKa = 3.66QLDD245 pKa = 4.0KK246 pKa = 11.38NEE248 pKa = 4.75HH249 pKa = 5.82YY250 pKa = 10.95VSGMTFRR257 pKa = 11.84FNNTKK262 pKa = 10.59RR263 pKa = 11.84NLKK266 pKa = 10.21SKK268 pKa = 10.83AEE270 pKa = 3.78KK271 pKa = 8.74TQFIKK276 pKa = 10.61EE277 pKa = 4.12SQARR281 pKa = 11.84KK282 pKa = 8.93AAQTKK287 pKa = 10.26NEE289 pKa = 3.73NLGYY293 pKa = 11.09GNTKK297 pKa = 8.23KK298 pKa = 9.4TNDD301 pKa = 3.35VLITNKK307 pKa = 9.16MLQITQKK314 pKa = 10.76EE315 pKa = 4.25EE316 pKa = 3.95QNNKK320 pKa = 9.32

Molecular weight: 37.83 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

1715

67

695

245.0

28.0

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.706 ± 1.157

0.933 ± 0.346

4.606 ± 0.542

7.522 ± 1.25

3.499 ± 0.424

7.172 ± 1.267

1.574 ± 0.33

7.055 ± 1.141

8.047 ± 1.643

6.589 ± 0.453

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.507 ± 0.284

8.921 ± 0.491

2.507 ± 0.59

5.539 ± 0.533

3.965 ± 0.515

4.257 ± 0.371

8.222 ± 0.331

3.499 ± 0.35

1.691 ± 0.127

5.19 ± 0.743
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski