Beihai barnacle virus 7

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 7.56

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KMQ3|A0A1L3KMQ3_9VIRU Putative glycoprotein OS=Beihai barnacle virus 7 OX=1922365 PE=4 SV=1
MM1 pKa = 6.37TTIKK5 pKa = 10.71AFLSGQVEE13 pKa = 4.21GLPASEE19 pKa = 4.24QEE21 pKa = 4.17PSNVEE26 pKa = 3.99CKK28 pKa = 10.41DD29 pKa = 3.41ALTDD33 pKa = 3.9RR34 pKa = 11.84LKK36 pKa = 10.81KK37 pKa = 10.12VYY39 pKa = 10.33NYY41 pKa = 10.53RR42 pKa = 11.84DD43 pKa = 3.88DD44 pKa = 3.45SHH46 pKa = 6.94KK47 pKa = 11.27ALLAKK52 pKa = 10.16AWRR55 pKa = 11.84EE56 pKa = 4.0RR57 pKa = 11.84NSDD60 pKa = 3.16KK61 pKa = 11.23ARR63 pKa = 11.84LVSRR67 pKa = 11.84KK68 pKa = 9.49LLLAAPLFYY77 pKa = 10.69SPPGSEE83 pKa = 3.41TWVRR87 pKa = 11.84TTAVKK92 pKa = 10.06PDD94 pKa = 3.54NASDD98 pKa = 4.45LIEE101 pKa = 5.38DD102 pKa = 3.94VLEE105 pKa = 4.57DD106 pKa = 3.83TLKK109 pKa = 10.18TDD111 pKa = 3.15ATTTPLTTLSQRR123 pKa = 11.84VLKK126 pKa = 10.61ILDD129 pKa = 3.54SSAGDD134 pKa = 3.39SLVSQEE140 pKa = 4.84TILEE144 pKa = 4.08YY145 pKa = 10.99LPIYY149 pKa = 10.3AIIPWRR155 pKa = 11.84ALVKK159 pKa = 10.65SGGVTSSEE167 pKa = 4.14WFSSATGAMTTAIKK181 pKa = 10.54AADD184 pKa = 3.71DD185 pKa = 3.8RR186 pKa = 11.84LRR188 pKa = 11.84QADD191 pKa = 3.88EE192 pKa = 4.1TVKK195 pKa = 11.1NDD197 pKa = 3.03MKK199 pKa = 10.71TWFAQVDD206 pKa = 3.89PTEE209 pKa = 4.58LLTNHH214 pKa = 6.98LAEE217 pKa = 4.94IMACALAHH225 pKa = 5.59SEE227 pKa = 4.11RR228 pKa = 11.84VPPFIAASIQSVWMYY243 pKa = 10.48HH244 pKa = 5.79GLGTYY249 pKa = 10.03IFLRR253 pKa = 11.84EE254 pKa = 3.91AARR257 pKa = 11.84TLGLNSPEE265 pKa = 4.29LLRR268 pKa = 11.84EE269 pKa = 4.33LCCPLLNNQIMALVKK284 pKa = 10.73LMIDD288 pKa = 3.37EE289 pKa = 4.36QANNTPVFPYY299 pKa = 10.35IKK301 pKa = 9.8IINTNFHH308 pKa = 6.49SGVSTKK314 pKa = 10.51RR315 pKa = 11.84CIPLMYY321 pKa = 10.13VLRR324 pKa = 11.84QIICPISPKK333 pKa = 9.36TKK335 pKa = 9.49QGEE338 pKa = 4.71GIWGKK343 pKa = 8.78MCGVPSLDD351 pKa = 3.17VRR353 pKa = 11.84IPLAQAAMRR362 pKa = 11.84LRR364 pKa = 11.84RR365 pKa = 11.84KK366 pKa = 10.03HH367 pKa = 5.74ILTVRR372 pKa = 11.84EE373 pKa = 4.48GEE375 pKa = 4.24TSEE378 pKa = 4.78VMQQILGEE386 pKa = 4.16IRR388 pKa = 11.84DD389 pKa = 4.08TPLGYY394 pKa = 10.4DD395 pKa = 3.51DD396 pKa = 4.46TSSEE400 pKa = 4.1QEE402 pKa = 4.14AVDD405 pKa = 4.78PDD407 pKa = 4.41DD408 pKa = 5.65LGNPPAA414 pKa = 5.56

Molecular weight: 45.91 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KMY2|A0A1L3KMY2_9VIRU Uncharacterized protein OS=Beihai barnacle virus 7 OX=1922365 PE=4 SV=1
MM1 pKa = 6.75GQSVSKK7 pKa = 10.28EE8 pKa = 3.48IQEE11 pKa = 4.06RR12 pKa = 11.84WNTQVQALMHH22 pKa = 6.66MIRR25 pKa = 11.84TTIRR29 pKa = 11.84DD30 pKa = 3.26TCDD33 pKa = 2.53ARR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84EE38 pKa = 4.18TVEE41 pKa = 3.97TIKK44 pKa = 11.33DD45 pKa = 3.22EE46 pKa = 4.16FRR48 pKa = 11.84RR49 pKa = 11.84SNVHH53 pKa = 6.01IEE55 pKa = 3.9QVYY58 pKa = 10.46KK59 pKa = 10.54ILEE62 pKa = 4.18TAQTVPQPDD71 pKa = 3.78TQLSARR77 pKa = 11.84VEE79 pKa = 4.12NEE81 pKa = 4.29LFNQDD86 pKa = 2.49VWNNAGLGTCEE97 pKa = 4.41PPIKK101 pKa = 9.92IYY103 pKa = 10.91AVLSGVIVLLLALSIMFSVLWRR125 pKa = 11.84IEE127 pKa = 3.89KK128 pKa = 9.9AKK130 pKa = 10.6KK131 pKa = 9.41RR132 pKa = 11.84FRR134 pKa = 11.84RR135 pKa = 11.84TSSFRR140 pKa = 11.84PRR142 pKa = 11.84SILKK146 pKa = 10.18KK147 pKa = 10.14PPSPDD152 pKa = 3.22NVSLSSIRR160 pKa = 11.84TLYY163 pKa = 10.65

Molecular weight: 18.87 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

3521

153

1994

586.8

65.92

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.993 ± 0.732

1.874 ± 0.324

4.487 ± 0.524

5.283 ± 0.481

3.465 ± 0.605

4.857 ± 0.463

2.215 ± 0.238

5.623 ± 0.263

4.232 ± 0.319

11.843 ± 1.078

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.988 ± 0.152

3.55 ± 0.337

5.993 ± 0.318

3.323 ± 0.292

6.816 ± 0.469

9.458 ± 0.623

7.242 ± 0.622

6.93 ± 0.767

1.448 ± 0.258

3.38 ± 0.347
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski