Amino acid dipepetide frequency for Beihai noda-like virus 29

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
6.993AlaAla: 6.993 ± 0.0
0.0AlaCys: 0.0 ± 0.0
2.997AlaAsp: 2.997 ± 0.0
0.999AlaGlu: 0.999 ± 0.0
2.997AlaPhe: 2.997 ± 0.0
5.994AlaGly: 5.994 ± 0.0
1.998AlaHis: 1.998 ± 0.0
4.995AlaIle: 4.995 ± 0.0
3.996AlaLys: 3.996 ± 0.0
2.997AlaLeu: 2.997 ± 0.0
0.999AlaMet: 0.999 ± 0.0
3.996AlaAsn: 3.996 ± 0.0
4.995AlaPro: 4.995 ± 0.0
2.997AlaGln: 2.997 ± 0.0
7.992AlaArg: 7.992 ± 0.0
3.996AlaSer: 3.996 ± 0.0
2.997AlaThr: 2.997 ± 0.0
2.997AlaVal: 2.997 ± 0.0
0.999AlaTrp: 0.999 ± 0.0
1.998AlaTyr: 1.998 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.0CysAla: 0.0 ± 0.0
0.0CysCys: 0.0 ± 0.0
0.999CysAsp: 0.999 ± 0.0
0.999CysGlu: 0.999 ± 0.0
0.999CysPhe: 0.999 ± 0.0
0.0CysGly: 0.0 ± 0.0
0.0CysHis: 0.0 ± 0.0
0.0CysIle: 0.0 ± 0.0
0.0CysLys: 0.0 ± 0.0
0.999CysLeu: 0.999 ± 0.0
2.997CysMet: 2.997 ± 0.0
1.998CysAsn: 1.998 ± 0.0
1.998CysPro: 1.998 ± 0.0
0.0CysGln: 0.0 ± 0.0
1.998CysArg: 1.998 ± 0.0
0.999CysSer: 0.999 ± 0.0
0.999CysThr: 0.999 ± 0.0
2.997CysVal: 2.997 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
4.995AspAla: 4.995 ± 0.0
1.998AspCys: 1.998 ± 0.0
3.996AspAsp: 3.996 ± 0.0
3.996AspGlu: 3.996 ± 0.0
2.997AspPhe: 2.997 ± 0.0
4.995AspGly: 4.995 ± 0.0
1.998AspHis: 1.998 ± 0.0
2.997AspIle: 2.997 ± 0.0
3.996AspLys: 3.996 ± 0.0
4.995AspLeu: 4.995 ± 0.0
0.999AspMet: 0.999 ± 0.0
4.995AspAsn: 4.995 ± 0.0
3.996AspPro: 3.996 ± 0.0
0.999AspGln: 0.999 ± 0.0
0.999AspArg: 0.999 ± 0.0
1.998AspSer: 1.998 ± 0.0
1.998AspThr: 1.998 ± 0.0
4.995AspVal: 4.995 ± 0.0
1.998AspTrp: 1.998 ± 0.0
2.997AspTyr: 2.997 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
3.996GluAla: 3.996 ± 0.0
1.998GluCys: 1.998 ± 0.0
3.996GluAsp: 3.996 ± 0.0
2.997GluGlu: 2.997 ± 0.0
2.997GluPhe: 2.997 ± 0.0
1.998GluGly: 1.998 ± 0.0
0.999GluHis: 0.999 ± 0.0
1.998GluIle: 1.998 ± 0.0
0.999GluLys: 0.999 ± 0.0
3.996GluLeu: 3.996 ± 0.0
0.0GluMet: 0.0 ± 0.0
1.998GluAsn: 1.998 ± 0.0
5.994GluPro: 5.994 ± 0.0
1.998GluGln: 1.998 ± 0.0
3.996GluArg: 3.996 ± 0.0
2.997GluSer: 2.997 ± 0.0
2.997GluThr: 2.997 ± 0.0
5.994GluVal: 5.994 ± 0.0
0.999GluTrp: 0.999 ± 0.0
0.999GluTyr: 0.999 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
3.996PheAla: 3.996 ± 0.0
0.0PheCys: 0.0 ± 0.0
2.997PheAsp: 2.997 ± 0.0
0.0PheGlu: 0.0 ± 0.0
0.0PhePhe: 0.0 ± 0.0
2.997PheGly: 2.997 ± 0.0
2.997PheHis: 2.997 ± 0.0
0.0PheIle: 0.0 ± 0.0
0.999PheLys: 0.999 ± 0.0
3.996PheLeu: 3.996 ± 0.0
1.998PheMet: 1.998 ± 0.0
0.999PheAsn: 0.999 ± 0.0
0.999PhePro: 0.999 ± 0.0
1.998PheGln: 1.998 ± 0.0
5.994PheArg: 5.994 ± 0.0
0.999PheSer: 0.999 ± 0.0
0.999PheThr: 0.999 ± 0.0
2.997PheVal: 2.997 ± 0.0
0.0PheTrp: 0.0 ± 0.0
0.999PheTyr: 0.999 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
2.997GlyAla: 2.997 ± 0.0
0.0GlyCys: 0.0 ± 0.0
5.994GlyAsp: 5.994 ± 0.0
2.997GlyGlu: 2.997 ± 0.0
3.996GlyPhe: 3.996 ± 0.0
8.991GlyGly: 8.991 ± 0.0
3.996GlyHis: 3.996 ± 0.0
1.998GlyIle: 1.998 ± 0.0
1.998GlyLys: 1.998 ± 0.0
5.994GlyLeu: 5.994 ± 0.0
1.998GlyMet: 1.998 ± 0.0
1.998GlyAsn: 1.998 ± 0.0
2.997GlyPro: 2.997 ± 0.0
1.998GlyGln: 1.998 ± 0.0
6.993GlyArg: 6.993 ± 0.0
6.993GlySer: 6.993 ± 0.0
3.996GlyThr: 3.996 ± 0.0
8.991GlyVal: 8.991 ± 0.0
0.999GlyTrp: 0.999 ± 0.0
1.998GlyTyr: 1.998 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.998HisAla: 1.998 ± 0.0
0.0HisCys: 0.0 ± 0.0
1.998HisAsp: 1.998 ± 0.0
2.997HisGlu: 2.997 ± 0.0
0.0HisPhe: 0.0 ± 0.0
3.996HisGly: 3.996 ± 0.0
2.997HisHis: 2.997 ± 0.0
0.0HisIle: 0.0 ± 0.0
2.997HisLys: 2.997 ± 0.0
2.997HisLeu: 2.997 ± 0.0
0.0HisMet: 0.0 ± 0.0
0.999HisAsn: 0.999 ± 0.0
1.998HisPro: 1.998 ± 0.0
0.0HisGln: 0.0 ± 0.0
0.0HisArg: 0.0 ± 0.0
1.998HisSer: 1.998 ± 0.0
1.998HisThr: 1.998 ± 0.0
3.996HisVal: 3.996 ± 0.0
1.998HisTrp: 1.998 ± 0.0
0.999HisTyr: 0.999 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
2.997IleAla: 2.997 ± 0.0
0.0IleCys: 0.0 ± 0.0
2.997IleAsp: 2.997 ± 0.0
4.995IleGlu: 4.995 ± 0.0
0.0IlePhe: 0.0 ± 0.0
3.996IleGly: 3.996 ± 0.0
0.0IleHis: 0.0 ± 0.0
2.997IleIle: 2.997 ± 0.0
0.999IleLys: 0.999 ± 0.0
2.997IleLeu: 2.997 ± 0.0
0.0IleMet: 0.0 ± 0.0
0.0IleAsn: 0.0 ± 0.0
0.0IlePro: 0.0 ± 0.0
2.997IleGln: 2.997 ± 0.0
0.999IleArg: 0.999 ± 0.0
4.995IleSer: 4.995 ± 0.0
0.999IleThr: 0.999 ± 0.0
2.997IleVal: 2.997 ± 0.0
0.999IleTrp: 0.999 ± 0.0
0.999IleTyr: 0.999 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
0.999LysAla: 0.999 ± 0.0
0.0LysCys: 0.0 ± 0.0
2.997LysAsp: 2.997 ± 0.0
0.0LysGlu: 0.0 ± 0.0
3.996LysPhe: 3.996 ± 0.0
1.998LysGly: 1.998 ± 0.0
1.998LysHis: 1.998 ± 0.0
2.997LysIle: 2.997 ± 0.0
0.0LysLys: 0.0 ± 0.0
4.995LysLeu: 4.995 ± 0.0
0.0LysMet: 0.0 ± 0.0
1.998LysAsn: 1.998 ± 0.0
3.996LysPro: 3.996 ± 0.0
1.998LysGln: 1.998 ± 0.0
6.993LysArg: 6.993 ± 0.0
1.998LysSer: 1.998 ± 0.0
2.997LysThr: 2.997 ± 0.0
5.994LysVal: 5.994 ± 0.0
0.999LysTrp: 0.999 ± 0.0
0.0LysTyr: 0.0 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
8.991LeuAla: 8.991 ± 0.0
0.0LeuCys: 0.0 ± 0.0
4.995LeuAsp: 4.995 ± 0.0
3.996LeuGlu: 3.996 ± 0.0
1.998LeuPhe: 1.998 ± 0.0
9.99LeuGly: 9.99 ± 0.0
5.994LeuHis: 5.994 ± 0.0
1.998LeuIle: 1.998 ± 0.0
5.994LeuLys: 5.994 ± 0.0
3.996LeuLeu: 3.996 ± 0.0
0.999LeuMet: 0.999 ± 0.0
1.998LeuAsn: 1.998 ± 0.0
2.997LeuPro: 2.997 ± 0.0
0.999LeuGln: 0.999 ± 0.0
2.997LeuArg: 2.997 ± 0.0
6.993LeuSer: 6.993 ± 0.0
3.996LeuThr: 3.996 ± 0.0
6.993LeuVal: 6.993 ± 0.0
0.999LeuTrp: 0.999 ± 0.0
1.998LeuTyr: 1.998 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
0.999MetAla: 0.999 ± 0.0
0.0MetCys: 0.0 ± 0.0
0.999MetAsp: 0.999 ± 0.0
0.0MetGlu: 0.0 ± 0.0
0.0MetPhe: 0.0 ± 0.0
2.997MetGly: 2.997 ± 0.0
0.0MetHis: 0.0 ± 0.0
0.0MetIle: 0.0 ± 0.0
3.996MetLys: 3.996 ± 0.0
1.998MetLeu: 1.998 ± 0.0
1.998MetMet: 1.998 ± 0.0
0.999MetAsn: 0.999 ± 0.0
1.998MetPro: 1.998 ± 0.0
3.996MetGln: 3.996 ± 0.0
0.999MetArg: 0.999 ± 0.0
0.999MetSer: 0.999 ± 0.0
1.998MetThr: 1.998 ± 0.0
0.999MetVal: 0.999 ± 0.0
0.0MetTrp: 0.0 ± 0.0
0.999MetTyr: 0.999 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
3.996AsnAla: 3.996 ± 0.0
0.0AsnCys: 0.0 ± 0.0
2.997AsnAsp: 2.997 ± 0.0
1.998AsnGlu: 1.998 ± 0.0
0.999AsnPhe: 0.999 ± 0.0
1.998AsnGly: 1.998 ± 0.0
0.0AsnHis: 0.0 ± 0.0
0.0AsnIle: 0.0 ± 0.0
2.997AsnLys: 2.997 ± 0.0
2.997AsnLeu: 2.997 ± 0.0
0.0AsnMet: 0.0 ± 0.0
1.998AsnAsn: 1.998 ± 0.0
2.997AsnPro: 2.997 ± 0.0
0.0AsnGln: 0.0 ± 0.0
1.998AsnArg: 1.998 ± 0.0
3.996AsnSer: 3.996 ± 0.0
0.999AsnThr: 0.999 ± 0.0
1.998AsnVal: 1.998 ± 0.0
2.997AsnTrp: 2.997 ± 0.0
2.997AsnTyr: 2.997 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
3.996ProAla: 3.996 ± 0.0
1.998ProCys: 1.998 ± 0.0
1.998ProAsp: 1.998 ± 0.0
4.995ProGlu: 4.995 ± 0.0
0.0ProPhe: 0.0 ± 0.0
5.994ProGly: 5.994 ± 0.0
3.996ProHis: 3.996 ± 0.0
2.997ProIle: 2.997 ± 0.0
3.996ProLys: 3.996 ± 0.0
5.994ProLeu: 5.994 ± 0.0
0.999ProMet: 0.999 ± 0.0
3.996ProAsn: 3.996 ± 0.0
1.998ProPro: 1.998 ± 0.0
0.999ProGln: 0.999 ± 0.0
2.997ProArg: 2.997 ± 0.0
3.996ProSer: 3.996 ± 0.0
3.996ProThr: 3.996 ± 0.0
3.996ProVal: 3.996 ± 0.0
0.0ProTrp: 0.0 ± 0.0
4.995ProTyr: 4.995 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
0.999GlnAla: 0.999 ± 0.0
0.999GlnCys: 0.999 ± 0.0
3.996GlnAsp: 3.996 ± 0.0
0.0GlnGlu: 0.0 ± 0.0
0.999GlnPhe: 0.999 ± 0.0
1.998GlnGly: 1.998 ± 0.0
1.998GlnHis: 1.998 ± 0.0
1.998GlnIle: 1.998 ± 0.0
0.0GlnLys: 0.0 ± 0.0
1.998GlnLeu: 1.998 ± 0.0
0.0GlnMet: 0.0 ± 0.0
0.999GlnAsn: 0.999 ± 0.0
0.999GlnPro: 0.999 ± 0.0
0.0GlnGln: 0.0 ± 0.0
0.999GlnArg: 0.999 ± 0.0
0.999GlnSer: 0.999 ± 0.0
1.998GlnThr: 1.998 ± 0.0
1.998GlnVal: 1.998 ± 0.0
0.999GlnTrp: 0.999 ± 0.0
1.998GlnTyr: 1.998 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
5.994ArgAla: 5.994 ± 0.0
2.997ArgCys: 2.997 ± 0.0
2.997ArgAsp: 2.997 ± 0.0
3.996ArgGlu: 3.996 ± 0.0
1.998ArgPhe: 1.998 ± 0.0
0.0ArgGly: 0.0 ± 0.0
0.999ArgHis: 0.999 ± 0.0
3.996ArgIle: 3.996 ± 0.0
4.995ArgLys: 4.995 ± 0.0
4.995ArgLeu: 4.995 ± 0.0
1.998ArgMet: 1.998 ± 0.0
0.999ArgAsn: 0.999 ± 0.0
7.992ArgPro: 7.992 ± 0.0
1.998ArgGln: 1.998 ± 0.0
4.995ArgArg: 4.995 ± 0.0
4.995ArgSer: 4.995 ± 0.0
2.997ArgThr: 2.997 ± 0.0
5.994ArgVal: 5.994 ± 0.0
0.999ArgTrp: 0.999 ± 0.0
2.997ArgTyr: 2.997 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
2.997SerAla: 2.997 ± 0.0
0.0SerCys: 0.0 ± 0.0
0.999SerAsp: 0.999 ± 0.0
2.997SerGlu: 2.997 ± 0.0
4.995SerPhe: 4.995 ± 0.0
8.991SerGly: 8.991 ± 0.0
0.0SerHis: 0.0 ± 0.0
2.997SerIle: 2.997 ± 0.0
0.999SerLys: 0.999 ± 0.0
5.994SerLeu: 5.994 ± 0.0
1.998SerMet: 1.998 ± 0.0
1.998SerAsn: 1.998 ± 0.0
3.996SerPro: 3.996 ± 0.0
0.999SerGln: 0.999 ± 0.0
5.994SerArg: 5.994 ± 0.0
6.993SerSer: 6.993 ± 0.0
4.995SerThr: 4.995 ± 0.0
5.994SerVal: 5.994 ± 0.0
2.997SerTrp: 2.997 ± 0.0
1.998SerTyr: 1.998 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
0.999ThrAla: 0.999 ± 0.0
0.999ThrCys: 0.999 ± 0.0
3.996ThrAsp: 3.996 ± 0.0
2.997ThrGlu: 2.997 ± 0.0
3.996ThrPhe: 3.996 ± 0.0
3.996ThrGly: 3.996 ± 0.0
0.0ThrHis: 0.0 ± 0.0
2.997ThrIle: 2.997 ± 0.0
2.997ThrLys: 2.997 ± 0.0
6.993ThrLeu: 6.993 ± 0.0
1.998ThrMet: 1.998 ± 0.0
1.998ThrAsn: 1.998 ± 0.0
2.997ThrPro: 2.997 ± 0.0
0.0ThrGln: 0.0 ± 0.0
4.995ThrArg: 4.995 ± 0.0
1.998ThrSer: 1.998 ± 0.0
4.995ThrThr: 4.995 ± 0.0
3.996ThrVal: 3.996 ± 0.0
0.999ThrTrp: 0.999 ± 0.0
0.0ThrTyr: 0.0 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
4.995ValAla: 4.995 ± 0.0
3.996ValCys: 3.996 ± 0.0
4.995ValAsp: 4.995 ± 0.0
4.995ValGlu: 4.995 ± 0.0
0.999ValPhe: 0.999 ± 0.0
4.995ValGly: 4.995 ± 0.0
1.998ValHis: 1.998 ± 0.0
1.998ValIle: 1.998 ± 0.0
2.997ValLys: 2.997 ± 0.0
4.995ValLeu: 4.995 ± 0.0
1.998ValMet: 1.998 ± 0.0
1.998ValAsn: 1.998 ± 0.0
7.992ValPro: 7.992 ± 0.0
1.998ValGln: 1.998 ± 0.0
4.995ValArg: 4.995 ± 0.0
9.99ValSer: 9.99 ± 0.0
3.996ValThr: 3.996 ± 0.0
5.994ValVal: 5.994 ± 0.0
1.998ValTrp: 1.998 ± 0.0
4.995ValTyr: 4.995 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.999TrpAla: 0.999 ± 0.0
0.0TrpCys: 0.0 ± 0.0
1.998TrpAsp: 1.998 ± 0.0
1.998TrpGlu: 1.998 ± 0.0
1.998TrpPhe: 1.998 ± 0.0
0.999TrpGly: 0.999 ± 0.0
0.999TrpHis: 0.999 ± 0.0
0.0TrpIle: 0.0 ± 0.0
1.998TrpLys: 1.998 ± 0.0
0.999TrpLeu: 0.999 ± 0.0
2.997TrpMet: 2.997 ± 0.0
1.998TrpAsn: 1.998 ± 0.0
1.998TrpPro: 1.998 ± 0.0
0.0TrpGln: 0.0 ± 0.0
0.0TrpArg: 0.0 ± 0.0
0.0TrpSer: 0.0 ± 0.0
1.998TrpThr: 1.998 ± 0.0
0.999TrpVal: 0.999 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
3.996TyrAla: 3.996 ± 0.0
2.997TyrCys: 2.997 ± 0.0
3.996TyrAsp: 3.996 ± 0.0
5.994TyrGlu: 5.994 ± 0.0
0.0TyrPhe: 0.0 ± 0.0
0.999TyrGly: 0.999 ± 0.0
0.999TyrHis: 0.999 ± 0.0
0.0TyrIle: 0.0 ± 0.0
0.0TyrLys: 0.0 ± 0.0
3.996TyrLeu: 3.996 ± 0.0
0.999TyrMet: 0.999 ± 0.0
0.0TyrAsn: 0.0 ± 0.0
0.999TyrPro: 0.999 ± 0.0
0.0TyrGln: 0.0 ± 0.0
1.998TyrArg: 1.998 ± 0.0
1.998TyrSer: 1.998 ± 0.0
1.998TyrThr: 1.998 ± 0.0
1.998TyrVal: 1.998 ± 0.0
0.999TyrTrp: 0.999 ± 0.0
1.998TyrTyr: 1.998 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (1002 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski