Amino acid dipepetide frequency for Bovine adenovirus 2 (BAdV-2) (Mastadenovirus bos2)

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
5.633AlaAla: 5.633 ± 1.174
2.651AlaCys: 2.651 ± 1.573
4.307AlaAsp: 4.307 ± 0.633
7.952AlaGlu: 7.952 ± 1.116
2.982AlaPhe: 2.982 ± 0.89
2.651AlaGly: 2.651 ± 1.02
0.0AlaHis: 0.0 ± 0.0
1.657AlaIle: 1.657 ± 0.671
1.988AlaLys: 1.988 ± 1.084
7.29AlaLeu: 7.29 ± 1.625
0.994AlaMet: 0.994 ± 0.851
2.651AlaAsn: 2.651 ± 0.693
1.988AlaPro: 1.988 ± 0.825
3.645AlaGln: 3.645 ± 1.038
3.313AlaArg: 3.313 ± 1.394
6.296AlaSer: 6.296 ± 1.767
6.627AlaThr: 6.627 ± 1.077
4.307AlaVal: 4.307 ± 1.1
1.325AlaTrp: 1.325 ± 0.46
2.319AlaTyr: 2.319 ± 0.938
0.0AlaXaa: 0.0 ± 0.0
Cys
0.994CysAla: 0.994 ± 0.673
0.663CysCys: 0.663 ± 0.33
1.325CysAsp: 1.325 ± 0.663
1.325CysGlu: 1.325 ± 0.696
1.657CysPhe: 1.657 ± 0.982
2.982CysGly: 2.982 ± 0.944
0.994CysHis: 0.994 ± 0.819
0.663CysIle: 0.663 ± 0.387
1.325CysLys: 1.325 ± 0.694
2.319CysLeu: 2.319 ± 0.662
0.663CysMet: 0.663 ± 0.715
0.994CysAsn: 0.994 ± 0.541
0.331CysPro: 0.331 ± 0.239
0.331CysGln: 0.331 ± 0.264
1.325CysArg: 1.325 ± 0.926
3.313CysSer: 3.313 ± 1.006
0.663CysThr: 0.663 ± 0.33
2.319CysVal: 2.319 ± 1.021
0.663CysTrp: 0.663 ± 0.478
2.651CysTyr: 2.651 ± 0.988
0.0CysXaa: 0.0 ± 0.0
Asp
3.976AspAla: 3.976 ± 0.581
1.657AspCys: 1.657 ± 0.855
1.988AspAsp: 1.988 ± 1.026
5.633AspGlu: 5.633 ± 1.32
2.651AspPhe: 2.651 ± 0.854
1.325AspGly: 1.325 ± 0.46
0.994AspHis: 0.994 ± 0.475
4.639AspIle: 4.639 ± 0.933
2.319AspLys: 2.319 ± 0.888
3.313AspLeu: 3.313 ± 1.013
0.663AspMet: 0.663 ± 0.431
2.319AspAsn: 2.319 ± 0.895
1.657AspPro: 1.657 ± 0.643
0.663AspGln: 0.663 ± 0.281
1.988AspArg: 1.988 ± 0.652
2.982AspSer: 2.982 ± 0.808
3.313AspThr: 3.313 ± 1.02
2.651AspVal: 2.651 ± 0.893
0.663AspTrp: 0.663 ± 0.357
1.988AspTyr: 1.988 ± 0.977
0.0AspXaa: 0.0 ± 0.0
Glu
4.97GluAla: 4.97 ± 1.336
0.994GluCys: 0.994 ± 0.717
3.976GluAsp: 3.976 ± 1.118
4.639GluGlu: 4.639 ± 0.985
2.651GluPhe: 2.651 ± 0.979
2.651GluGly: 2.651 ± 0.714
1.657GluHis: 1.657 ± 0.535
4.97GluIle: 4.97 ± 1.199
2.982GluLys: 2.982 ± 1.189
7.29GluLeu: 7.29 ± 1.51
1.988GluMet: 1.988 ± 0.424
3.313GluAsn: 3.313 ± 1.126
2.319GluPro: 2.319 ± 0.707
4.639GluGln: 4.639 ± 1.418
3.313GluArg: 3.313 ± 0.544
3.645GluSer: 3.645 ± 0.828
2.982GluThr: 2.982 ± 0.946
4.307GluVal: 4.307 ± 0.953
1.657GluTrp: 1.657 ± 0.89
1.988GluTyr: 1.988 ± 0.46
0.0GluXaa: 0.0 ± 0.0
Phe
2.982PheAla: 2.982 ± 0.599
1.988PheCys: 1.988 ± 0.688
2.319PheAsp: 2.319 ± 0.81
1.988PheGlu: 1.988 ± 1.499
2.982PhePhe: 2.982 ± 0.576
2.982PheGly: 2.982 ± 1.323
2.651PheHis: 2.651 ± 1.27
3.976PheIle: 3.976 ± 0.985
1.657PheLys: 1.657 ± 0.859
3.976PheLeu: 3.976 ± 1.21
1.988PheMet: 1.988 ± 0.47
2.651PheAsn: 2.651 ± 0.504
2.651PhePro: 2.651 ± 0.875
2.651PheGln: 2.651 ± 1.25
2.319PheArg: 2.319 ± 1.3
3.976PheSer: 3.976 ± 0.666
1.988PheThr: 1.988 ± 0.485
4.639PheVal: 4.639 ± 1.012
1.657PheTrp: 1.657 ± 0.914
1.988PheTyr: 1.988 ± 0.612
0.0PheXaa: 0.0 ± 0.0
Gly
3.976GlyAla: 3.976 ± 0.823
1.657GlyCys: 1.657 ± 1.101
2.319GlyAsp: 2.319 ± 0.787
2.982GlyGlu: 2.982 ± 0.653
2.651GlyPhe: 2.651 ± 0.904
3.313GlyGly: 3.313 ± 1.427
2.651GlyHis: 2.651 ± 0.966
2.651GlyIle: 2.651 ± 1.233
4.307GlyLys: 4.307 ± 2.034
3.313GlyLeu: 3.313 ± 1.676
0.994GlyMet: 0.994 ± 0.474
2.319GlyAsn: 2.319 ± 1.035
1.325GlyPro: 1.325 ± 0.649
1.325GlyGln: 1.325 ± 0.607
3.645GlyArg: 3.645 ± 1.186
5.633GlySer: 5.633 ± 1.379
1.325GlyThr: 1.325 ± 0.999
1.657GlyVal: 1.657 ± 1.122
0.663GlyTrp: 0.663 ± 0.281
0.994GlyTyr: 0.994 ± 0.562
0.0GlyXaa: 0.0 ± 0.0
His
0.663HisAla: 0.663 ± 0.478
0.331HisCys: 0.331 ± 0.358
0.994HisAsp: 0.994 ± 0.621
0.994HisGlu: 0.994 ± 0.466
0.663HisPhe: 0.663 ± 0.715
1.325HisGly: 1.325 ± 0.659
0.994HisHis: 0.994 ± 0.452
2.319HisIle: 2.319 ± 0.492
0.994HisLys: 0.994 ± 0.543
2.982HisLeu: 2.982 ± 1.104
0.0HisMet: 0.0 ± 0.0
3.313HisAsn: 3.313 ± 1.175
0.663HisPro: 0.663 ± 0.357
0.994HisGln: 0.994 ± 0.401
2.319HisArg: 2.319 ± 0.657
0.331HisSer: 0.331 ± 0.374
2.319HisThr: 2.319 ± 1.38
1.325HisVal: 1.325 ± 0.643
0.331HisTrp: 0.331 ± 0.427
1.325HisTyr: 1.325 ± 0.618
0.0HisXaa: 0.0 ± 0.0
Ile
3.976IleAla: 3.976 ± 1.024
1.657IleCys: 1.657 ± 0.54
4.307IleAsp: 4.307 ± 1.056
2.982IleGlu: 2.982 ± 1.076
2.982IlePhe: 2.982 ± 0.793
3.645IleGly: 3.645 ± 1.0
0.663IleHis: 0.663 ± 0.317
2.982IleIle: 2.982 ± 1.705
5.633IleLys: 5.633 ± 1.727
5.633IleLeu: 5.633 ± 1.355
0.663IleMet: 0.663 ± 0.478
2.982IleAsn: 2.982 ± 0.881
0.663IlePro: 0.663 ± 0.357
3.645IleGln: 3.645 ± 1.068
4.307IleArg: 4.307 ± 1.548
4.639IleSer: 4.639 ± 1.913
2.651IleThr: 2.651 ± 0.993
2.982IleVal: 2.982 ± 0.799
0.331IleTrp: 0.331 ± 0.264
2.982IleTyr: 2.982 ± 0.597
0.0IleXaa: 0.0 ± 0.0
Lys
2.319LysAla: 2.319 ± 0.923
1.988LysCys: 1.988 ± 0.753
2.651LysAsp: 2.651 ± 0.804
1.988LysGlu: 1.988 ± 0.741
1.657LysPhe: 1.657 ± 0.697
2.651LysGly: 2.651 ± 1.547
1.325LysHis: 1.325 ± 0.479
5.964LysIle: 5.964 ± 2.993
1.325LysLys: 1.325 ± 0.56
5.633LysLeu: 5.633 ± 1.157
0.994LysMet: 0.994 ± 0.811
2.982LysAsn: 2.982 ± 1.138
2.651LysPro: 2.651 ± 0.761
3.313LysGln: 3.313 ± 0.928
0.994LysArg: 0.994 ± 0.717
2.651LysSer: 2.651 ± 1.641
2.319LysThr: 2.319 ± 0.445
2.651LysVal: 2.651 ± 1.822
0.0LysTrp: 0.0 ± 0.0
1.657LysTyr: 1.657 ± 0.711
0.0LysXaa: 0.0 ± 0.0
Leu
7.952LeuAla: 7.952 ± 1.209
2.651LeuCys: 2.651 ± 0.919
4.307LeuAsp: 4.307 ± 0.962
6.296LeuGlu: 6.296 ± 1.038
3.645LeuPhe: 3.645 ± 0.471
2.982LeuGly: 2.982 ± 1.276
2.982LeuHis: 2.982 ± 0.704
4.97LeuIle: 4.97 ± 1.739
3.976LeuLys: 3.976 ± 0.658
6.296LeuLeu: 6.296 ± 1.308
1.988LeuMet: 1.988 ± 0.638
4.97LeuAsn: 4.97 ± 1.225
7.621LeuPro: 7.621 ± 1.395
5.964LeuGln: 5.964 ± 2.253
4.639LeuArg: 4.639 ± 1.103
7.621LeuSer: 7.621 ± 2.169
6.958LeuThr: 6.958 ± 1.451
6.296LeuVal: 6.296 ± 1.034
1.325LeuTrp: 1.325 ± 0.507
2.319LeuTyr: 2.319 ± 0.8
0.0LeuXaa: 0.0 ± 0.0
Met
0.994MetAla: 0.994 ± 0.6
0.0MetCys: 0.0 ± 0.0
0.663MetAsp: 0.663 ± 0.427
1.325MetGlu: 1.325 ± 0.479
0.331MetPhe: 0.331 ± 0.374
0.331MetGly: 0.331 ± 0.358
0.994MetHis: 0.994 ± 0.475
0.994MetIle: 0.994 ± 0.679
0.0MetLys: 0.0 ± 0.0
3.976MetLeu: 3.976 ± 1.421
0.663MetMet: 0.663 ± 0.329
0.994MetAsn: 0.994 ± 0.577
1.325MetPro: 1.325 ± 0.643
0.331MetGln: 0.331 ± 0.38
2.319MetArg: 2.319 ± 1.149
0.663MetSer: 0.663 ± 0.449
1.325MetThr: 1.325 ± 0.622
0.663MetVal: 0.663 ± 0.33
0.663MetTrp: 0.663 ± 0.715
0.994MetTyr: 0.994 ± 0.45
0.0MetXaa: 0.0 ± 0.0
Asn
2.982AsnAla: 2.982 ± 0.698
1.988AsnCys: 1.988 ± 1.104
1.988AsnAsp: 1.988 ± 0.432
3.313AsnGlu: 3.313 ± 0.876
4.639AsnPhe: 4.639 ± 1.083
2.982AsnGly: 2.982 ± 0.917
0.994AsnHis: 0.994 ± 0.288
3.645AsnIle: 3.645 ± 0.983
3.976AsnLys: 3.976 ± 1.355
4.97AsnLeu: 4.97 ± 1.363
0.663AsnMet: 0.663 ± 0.401
1.657AsnAsn: 1.657 ± 0.962
2.982AsnPro: 2.982 ± 1.659
1.325AsnGln: 1.325 ± 0.461
3.313AsnArg: 3.313 ± 0.954
4.307AsnSer: 4.307 ± 1.126
1.657AsnThr: 1.657 ± 0.655
1.988AsnVal: 1.988 ± 0.778
0.994AsnTrp: 0.994 ± 0.643
1.657AsnTyr: 1.657 ± 0.911
0.0AsnXaa: 0.0 ± 0.0
Pro
3.976ProAla: 3.976 ± 1.005
0.331ProCys: 0.331 ± 0.264
1.988ProAsp: 1.988 ± 0.809
3.645ProGlu: 3.645 ± 0.999
3.976ProPhe: 3.976 ± 0.972
2.982ProGly: 2.982 ± 1.523
0.663ProHis: 0.663 ± 0.281
1.988ProIle: 1.988 ± 1.434
1.325ProLys: 1.325 ± 0.956
2.982ProLeu: 2.982 ± 0.762
0.994ProMet: 0.994 ± 0.658
3.645ProAsn: 3.645 ± 1.035
3.313ProPro: 3.313 ± 1.001
1.988ProGln: 1.988 ± 0.768
1.988ProArg: 1.988 ± 0.73
3.645ProSer: 3.645 ± 0.984
2.651ProThr: 2.651 ± 0.996
3.313ProVal: 3.313 ± 1.127
0.994ProTrp: 0.994 ± 0.506
0.994ProTyr: 0.994 ± 0.717
0.0ProXaa: 0.0 ± 0.0
Gln
1.988GlnAla: 1.988 ± 0.697
0.663GlnCys: 0.663 ± 0.383
1.988GlnAsp: 1.988 ± 0.76
3.645GlnGlu: 3.645 ± 1.433
2.651GlnPhe: 2.651 ± 0.605
1.325GlnGly: 1.325 ± 0.519
0.331GlnHis: 0.331 ± 0.358
2.651GlnIle: 2.651 ± 0.914
2.319GlnLys: 2.319 ± 0.662
5.964GlnLeu: 5.964 ± 1.956
0.331GlnMet: 0.331 ± 0.374
1.657GlnAsn: 1.657 ± 0.775
3.645GlnPro: 3.645 ± 1.714
3.313GlnGln: 3.313 ± 0.872
3.313GlnArg: 3.313 ± 0.796
2.982GlnSer: 2.982 ± 0.514
1.988GlnThr: 1.988 ± 0.548
2.982GlnVal: 2.982 ± 0.962
0.0GlnTrp: 0.0 ± 0.0
0.663GlnTyr: 0.663 ± 0.512
0.0GlnXaa: 0.0 ± 0.0
Arg
6.627ArgAla: 6.627 ± 2.314
0.994ArgCys: 0.994 ± 0.645
1.657ArgAsp: 1.657 ± 0.41
2.982ArgGlu: 2.982 ± 1.215
2.319ArgPhe: 2.319 ± 0.703
4.307ArgGly: 4.307 ± 0.979
1.657ArgHis: 1.657 ± 0.852
1.988ArgIle: 1.988 ± 0.485
2.319ArgLys: 2.319 ± 0.623
7.621ArgLeu: 7.621 ± 1.311
0.331ArgMet: 0.331 ± 0.351
3.645ArgAsn: 3.645 ± 0.948
2.651ArgPro: 2.651 ± 0.924
0.994ArgGln: 0.994 ± 0.381
4.639ArgArg: 4.639 ± 2.011
1.988ArgSer: 1.988 ± 1.079
4.639ArgThr: 4.639 ± 1.018
3.645ArgVal: 3.645 ± 1.218
0.663ArgTrp: 0.663 ± 0.281
1.657ArgTyr: 1.657 ± 0.54
0.0ArgXaa: 0.0 ± 0.0
Ser
4.639SerAla: 4.639 ± 0.99
1.657SerCys: 1.657 ± 0.359
3.313SerAsp: 3.313 ± 0.582
5.633SerGlu: 5.633 ± 1.039
4.639SerPhe: 4.639 ± 1.099
4.307SerGly: 4.307 ± 1.417
1.657SerHis: 1.657 ± 1.195
4.639SerIle: 4.639 ± 0.756
2.982SerLys: 2.982 ± 0.729
6.627SerLeu: 6.627 ± 2.055
1.325SerMet: 1.325 ± 0.642
3.976SerAsn: 3.976 ± 1.24
3.976SerPro: 3.976 ± 0.97
2.651SerGln: 2.651 ± 0.602
3.976SerArg: 3.976 ± 1.261
6.296SerSer: 6.296 ± 1.452
1.988SerThr: 1.988 ± 1.25
2.982SerVal: 2.982 ± 0.845
0.663SerTrp: 0.663 ± 0.543
2.319SerTyr: 2.319 ± 0.731
0.0SerXaa: 0.0 ± 0.0
Thr
3.976ThrAla: 3.976 ± 0.926
1.988ThrCys: 1.988 ± 0.716
2.319ThrAsp: 2.319 ± 0.752
3.313ThrGlu: 3.313 ± 0.981
2.982ThrPhe: 2.982 ± 0.951
1.657ThrGly: 1.657 ± 0.894
1.325ThrHis: 1.325 ± 0.36
3.645ThrIle: 3.645 ± 1.107
1.988ThrLys: 1.988 ± 0.645
8.615ThrLeu: 8.615 ± 1.369
0.994ThrMet: 0.994 ± 0.509
2.982ThrAsn: 2.982 ± 1.126
1.988ThrPro: 1.988 ± 0.803
0.994ThrGln: 0.994 ± 0.401
2.982ThrArg: 2.982 ± 1.111
2.982ThrSer: 2.982 ± 0.732
4.639ThrThr: 4.639 ± 1.613
2.651ThrVal: 2.651 ± 0.615
1.325ThrTrp: 1.325 ± 0.526
2.982ThrTyr: 2.982 ± 1.446
0.0ThrXaa: 0.0 ± 0.0
Val
3.313ValAla: 3.313 ± 1.041
1.988ValCys: 1.988 ± 0.869
1.988ValAsp: 1.988 ± 0.795
2.982ValGlu: 2.982 ± 0.919
5.302ValPhe: 5.302 ± 1.301
3.976ValGly: 3.976 ± 1.58
0.663ValHis: 0.663 ± 0.76
3.313ValIle: 3.313 ± 0.807
2.651ValLys: 2.651 ± 1.184
2.982ValLeu: 2.982 ± 0.931
1.325ValMet: 1.325 ± 1.058
3.313ValAsn: 3.313 ± 0.632
2.982ValPro: 2.982 ± 0.955
2.651ValGln: 2.651 ± 0.669
4.307ValArg: 4.307 ± 1.234
3.645ValSer: 3.645 ± 0.635
3.976ValThr: 3.976 ± 1.081
2.651ValVal: 2.651 ± 0.977
0.0ValTrp: 0.0 ± 0.0
2.982ValTyr: 2.982 ± 0.796
0.0ValXaa: 0.0 ± 0.0
Trp
1.988TrpAla: 1.988 ± 0.519
0.0TrpCys: 0.0 ± 0.0
0.994TrpAsp: 0.994 ± 0.543
0.663TrpGlu: 0.663 ± 0.357
0.331TrpPhe: 0.331 ± 0.38
0.331TrpGly: 0.331 ± 0.264
0.331TrpHis: 0.331 ± 0.239
0.331TrpIle: 0.331 ± 0.239
1.325TrpLys: 1.325 ± 0.768
1.988TrpLeu: 1.988 ± 0.533
0.663TrpMet: 0.663 ± 0.281
0.663TrpAsn: 0.663 ± 0.281
0.663TrpPro: 0.663 ± 0.411
0.331TrpGln: 0.331 ± 0.374
1.325TrpArg: 1.325 ± 0.489
0.994TrpSer: 0.994 ± 0.367
0.663TrpThr: 0.663 ± 0.317
0.331TrpVal: 0.331 ± 0.264
0.663TrpTrp: 0.663 ± 0.375
0.331TrpTyr: 0.331 ± 0.356
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.651TyrAla: 2.651 ± 0.815
1.657TyrCys: 1.657 ± 0.998
1.988TyrAsp: 1.988 ± 1.084
2.651TyrGlu: 2.651 ± 0.893
2.319TyrPhe: 2.319 ± 0.674
0.994TyrGly: 0.994 ± 0.504
1.657TyrHis: 1.657 ± 1.025
2.319TyrIle: 2.319 ± 0.567
2.651TyrLys: 2.651 ± 0.606
1.988TyrLeu: 1.988 ± 0.746
0.994TyrMet: 0.994 ± 0.795
0.994TyrAsn: 0.994 ± 0.643
1.988TyrPro: 1.988 ± 0.576
2.651TyrGln: 2.651 ± 0.488
0.994TyrArg: 0.994 ± 0.513
1.657TyrSer: 1.657 ± 0.671
1.657TyrThr: 1.657 ± 0.59
2.651TyrVal: 2.651 ± 0.849
0.331TyrTrp: 0.331 ± 0.239
0.994TyrTyr: 0.994 ± 0.506
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 11 proteins (3019 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski