Capybara microvirus Cap3_SP_374

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.14

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W8F7|A0A4P8W8F7_9VIRU Major capsid protein OS=Capybara microvirus Cap3_SP_374 OX=2585437 PE=3 SV=1
MM1 pKa = 7.39SKK3 pKa = 10.66NVFIEE8 pKa = 4.27RR9 pKa = 11.84NDD11 pKa = 3.51FEE13 pKa = 6.21NDD15 pKa = 3.12VKK17 pKa = 10.99RR18 pKa = 11.84SAFDD22 pKa = 3.84LSHH25 pKa = 6.73NNHH28 pKa = 6.7LSLKK32 pKa = 9.33LGKK35 pKa = 8.4ITPVFLQEE43 pKa = 4.31GLPGSTFKK51 pKa = 10.44IDD53 pKa = 3.21PVMALKK59 pKa = 10.19AAPLVFPMQTKK70 pKa = 10.41LKK72 pKa = 10.49ASLSFFKK79 pKa = 11.28VNTRR83 pKa = 11.84TLWKK87 pKa = 10.11DD88 pKa = 2.66WTKK91 pKa = 10.82FITNVEE97 pKa = 4.31HH98 pKa = 7.63DD99 pKa = 3.45STMPKK104 pKa = 10.12VSVSADD110 pKa = 3.3SNFWKK115 pKa = 9.46TGEE118 pKa = 4.04LADD121 pKa = 3.86YY122 pKa = 10.78LGIPTAIYY130 pKa = 10.34SSSEE134 pKa = 3.62LTDD137 pKa = 3.2YY138 pKa = 8.72RR139 pKa = 11.84TLHH142 pKa = 6.77ALTEE146 pKa = 4.2VQDD149 pKa = 5.01LIKK152 pKa = 10.51GWYY155 pKa = 8.63LRR157 pKa = 11.84YY158 pKa = 9.99RR159 pKa = 11.84EE160 pKa = 4.85DD161 pKa = 4.67DD162 pKa = 3.02ASYY165 pKa = 10.51WMKK168 pKa = 11.11APINTTPSMNMKK180 pKa = 10.18GYY182 pKa = 10.15IGVAPSIDD190 pKa = 3.61QTRR193 pKa = 11.84SLYY196 pKa = 9.99EE197 pKa = 3.67QILVGRR203 pKa = 11.84NDD205 pKa = 3.7MVQQPYY211 pKa = 10.51GFPAMSLTGYY221 pKa = 9.97DD222 pKa = 3.89GPGSSQQLTKK232 pKa = 10.62SFPRR236 pKa = 11.84ISRR239 pKa = 11.84VFAITEE245 pKa = 3.87QVKK248 pKa = 10.58IGDD251 pKa = 3.96VTCSFNSNTNTAVINFVRR269 pKa = 11.84ADD271 pKa = 3.42GTMLFYY277 pKa = 10.42YY278 pKa = 9.88TGTITAHH285 pKa = 7.03KK286 pKa = 9.28YY287 pKa = 10.61SCTLTQANVNVINNEE302 pKa = 3.71IANGSPVFVFAYY314 pKa = 8.86TNQNFTTEE322 pKa = 4.59ASFQPDD328 pKa = 3.16TVEE331 pKa = 4.44YY332 pKa = 10.12IGEE335 pKa = 4.3TLTVPVALTYY345 pKa = 10.61TKK347 pKa = 10.85DD348 pKa = 3.33FTDD351 pKa = 3.04ISEE354 pKa = 4.4DD355 pKa = 3.49PEE357 pKa = 4.19RR358 pKa = 11.84NPFANGSTQRR368 pKa = 11.84NVVPISALPFRR379 pKa = 11.84AYY381 pKa = 9.7EE382 pKa = 3.96AVYY385 pKa = 9.5NAYY388 pKa = 9.96YY389 pKa = 10.36RR390 pKa = 11.84NEE392 pKa = 4.11RR393 pKa = 11.84VDD395 pKa = 3.57PLIINGRR402 pKa = 11.84KK403 pKa = 9.68EE404 pKa = 3.52YY405 pKa = 10.8DD406 pKa = 3.43LYY408 pKa = 11.37CNQEE412 pKa = 3.26GGYY415 pKa = 10.7DD416 pKa = 3.27HH417 pKa = 7.38TEE419 pKa = 4.12YY420 pKa = 11.03LLHH423 pKa = 6.86DD424 pKa = 5.13APWEE428 pKa = 4.03TDD430 pKa = 3.18VYY432 pKa = 9.55TSCLPSPMDD441 pKa = 4.06GPAPLIGLQSNLIGDD456 pKa = 5.14KK457 pKa = 9.49ITATMTTEE465 pKa = 3.54SGEE468 pKa = 4.14THH470 pKa = 7.28DD471 pKa = 4.35YY472 pKa = 11.09EE473 pKa = 5.63IGAVTDD479 pKa = 3.4STGNITGFTYY489 pKa = 10.64SEE491 pKa = 5.28DD492 pKa = 3.2IPYY495 pKa = 10.72DD496 pKa = 3.41LQRR499 pKa = 11.84QLNQKK504 pKa = 8.47VLSGISVNTIRR515 pKa = 11.84NASAFEE521 pKa = 3.99RR522 pKa = 11.84YY523 pKa = 8.97LRR525 pKa = 11.84NGLRR529 pKa = 11.84RR530 pKa = 11.84GKK532 pKa = 10.51KK533 pKa = 10.31YY534 pKa = 9.79IDD536 pKa = 3.22NMKK539 pKa = 10.29SHH541 pKa = 7.49FGDD544 pKa = 3.12THH546 pKa = 6.59IQYY549 pKa = 10.98DD550 pKa = 4.35SLQMPTFHH558 pKa = 7.15GGITSVFNVNQISSTTEE575 pKa = 3.34NPAIDD580 pKa = 4.22LALGSYY586 pKa = 9.48AGQMSLIDD594 pKa = 4.28NPNHH598 pKa = 6.54TISIYY603 pKa = 10.65CEE605 pKa = 3.68EE606 pKa = 4.03HH607 pKa = 6.85CYY609 pKa = 10.36IIGLLTVTPVPIYY622 pKa = 10.77NQTLPKK628 pKa = 10.38LFSKK632 pKa = 10.53FDD634 pKa = 3.27KK635 pKa = 10.76FDD637 pKa = 4.15FYY639 pKa = 11.23TPEE642 pKa = 4.06FDD644 pKa = 3.74QLSMQPIKK652 pKa = 10.4RR653 pKa = 11.84QEE655 pKa = 3.81VSVTNTYY662 pKa = 11.38AEE664 pKa = 4.37GGYY667 pKa = 6.66TACNEE672 pKa = 4.1TFGYY676 pKa = 8.96QLPWYY681 pKa = 8.45EE682 pKa = 4.29YY683 pKa = 11.19KK684 pKa = 10.72NALDD688 pKa = 3.75TTHH691 pKa = 6.31GQMRR695 pKa = 11.84TTMKK699 pKa = 10.11DD700 pKa = 3.26YY701 pKa = 11.04NMNRR705 pKa = 11.84VFHH708 pKa = 7.04GIPQLSSDD716 pKa = 4.92FIYY719 pKa = 10.96CDD721 pKa = 3.73GEE723 pKa = 4.14TLNNVFAVADD733 pKa = 3.79DD734 pKa = 4.37TEE736 pKa = 5.0DD737 pKa = 3.35KK738 pKa = 11.38VFGQIYY744 pKa = 9.95FKK746 pKa = 8.93TTVAHH751 pKa = 5.52PMSRR755 pKa = 11.84IGEE758 pKa = 4.48PTWHH762 pKa = 6.71

Molecular weight: 86.02 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W8E6|A0A4P8W8E6_9VIRU Minor capsid protein OS=Capybara microvirus Cap3_SP_374 OX=2585437 PE=4 SV=1
MM1 pKa = 7.57EE2 pKa = 5.59CLNPVTLIIEE12 pKa = 4.27KK13 pKa = 9.27TVYY16 pKa = 10.49NYY18 pKa = 9.05EE19 pKa = 4.01KK20 pKa = 9.91QIKK23 pKa = 8.86YY24 pKa = 10.72AVIDD28 pKa = 3.57NQRR31 pKa = 11.84YY32 pKa = 9.78DD33 pKa = 3.37GLSAYY38 pKa = 10.18DD39 pKa = 3.33IIFYY43 pKa = 10.12SRR45 pKa = 11.84KK46 pKa = 9.78ALEE49 pKa = 4.21NRR51 pKa = 11.84QSFPRR56 pKa = 11.84DD57 pKa = 3.16EE58 pKa = 4.17QNRR61 pKa = 11.84ILRR64 pKa = 11.84YY65 pKa = 9.66NPRR68 pKa = 11.84EE69 pKa = 3.64HH70 pKa = 6.13QFYY73 pKa = 10.48IRR75 pKa = 11.84VEE77 pKa = 4.01GVIDD81 pKa = 3.61GRR83 pKa = 11.84YY84 pKa = 7.39KK85 pKa = 10.38QKK87 pKa = 10.81SIYY90 pKa = 8.92FTQQVACRR98 pKa = 11.84HH99 pKa = 5.69CVLCVEE105 pKa = 5.12RR106 pKa = 11.84QRR108 pKa = 11.84QDD110 pKa = 2.31ITNRR114 pKa = 11.84ILFEE118 pKa = 4.25TEE120 pKa = 3.91TYY122 pKa = 10.0GPPIISTLTYY132 pKa = 10.66NNQSLPTDD140 pKa = 3.72GLNYY144 pKa = 10.46SDD146 pKa = 3.63VQKK149 pKa = 10.7LFKK152 pKa = 10.59VLRR155 pKa = 11.84QTITRR160 pKa = 11.84HH161 pKa = 4.72SAIFTDD167 pKa = 4.95GSGFRR172 pKa = 11.84YY173 pKa = 9.37FVAGEE178 pKa = 4.1YY179 pKa = 11.16GSITHH184 pKa = 7.05RR185 pKa = 11.84AHH187 pKa = 5.89YY188 pKa = 10.12HH189 pKa = 5.2LLLWNFPTPQQCKK202 pKa = 6.59EE203 pKa = 3.94WYY205 pKa = 8.32LKK207 pKa = 10.53KK208 pKa = 10.98YY209 pKa = 8.05NTEE212 pKa = 3.56LRR214 pKa = 11.84VAYY217 pKa = 10.05DD218 pKa = 3.53PNPNNKK224 pKa = 8.29NWYY227 pKa = 9.17FPHH230 pKa = 7.04LNNEE234 pKa = 4.13YY235 pKa = 10.26IIAEE239 pKa = 4.19KK240 pKa = 10.22KK241 pKa = 10.4GRR243 pKa = 11.84TFPVIEE249 pKa = 4.34STSYY253 pKa = 10.9LYY255 pKa = 10.1QDD257 pKa = 3.38YY258 pKa = 10.35FIRR261 pKa = 11.84YY262 pKa = 6.22HH263 pKa = 6.04WKK265 pKa = 9.99RR266 pKa = 11.84GLTLTEE272 pKa = 4.1SMRR275 pKa = 11.84GANTQSAATYY285 pKa = 8.3CAKK288 pKa = 10.39YY289 pKa = 9.8VNKK292 pKa = 10.28SASPHH297 pKa = 6.44PNPNMNPTFYY307 pKa = 10.58RR308 pKa = 11.84SSTGNGGLGSRR319 pKa = 11.84YY320 pKa = 7.66IRR322 pKa = 11.84EE323 pKa = 4.07YY324 pKa = 9.5IRR326 pKa = 11.84PYY328 pKa = 10.64ILTQYY333 pKa = 9.93HH334 pKa = 5.72ITGQVPLEE342 pKa = 4.02YY343 pKa = 10.31VYY345 pKa = 10.93RR346 pKa = 11.84PTNTTQIIHH355 pKa = 5.18VPIRR359 pKa = 11.84GYY361 pKa = 11.26LLDD364 pKa = 3.4QCFPTVSQLLPARR377 pKa = 11.84YY378 pKa = 8.44IEE380 pKa = 4.32YY381 pKa = 8.84YY382 pKa = 7.71QTVIARR388 pKa = 11.84SDD390 pKa = 3.18TLQRR394 pKa = 11.84LKK396 pKa = 11.26VKK398 pKa = 10.59DD399 pKa = 3.72LAPNNIIRR407 pKa = 11.84PMNTPRR413 pKa = 11.84GNNLNEE419 pKa = 3.64KK420 pKa = 9.49EE421 pKa = 3.98YY422 pKa = 11.02RR423 pKa = 11.84VFKK426 pKa = 10.76RR427 pKa = 11.84KK428 pKa = 9.79LSLPEE433 pKa = 3.91YY434 pKa = 10.8NEE436 pKa = 3.98MIQYY440 pKa = 10.87LKK442 pKa = 10.92DD443 pKa = 3.23KK444 pKa = 11.25SKK446 pKa = 11.19DD447 pKa = 3.07IDD449 pKa = 3.86FKK451 pKa = 11.37QVANMLQLRR460 pKa = 11.84KK461 pKa = 9.66IYY463 pKa = 10.4LEE465 pKa = 3.98NVAQQEE471 pKa = 4.16LPYY474 pKa = 10.44RR475 pKa = 11.84DD476 pKa = 4.3DD477 pKa = 5.83LSDD480 pKa = 4.04KK481 pKa = 10.43SIKK484 pKa = 9.59YY485 pKa = 8.71EE486 pKa = 3.7KK487 pKa = 10.43LINFRR492 pKa = 11.84KK493 pKa = 10.09NRR495 pKa = 11.84DD496 pKa = 3.48KK497 pKa = 11.1II498 pKa = 3.8

Molecular weight: 59.22 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1697

88

762

424.3

48.6

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.246 ± 1.458

0.943 ± 0.24

5.48 ± 0.524

5.716 ± 0.589

3.654 ± 0.986

5.127 ± 0.653

1.768 ± 0.419

6.364 ± 0.516

5.716 ± 0.711

7.778 ± 0.467

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.298 ± 0.432

7.307 ± 0.6

4.655 ± 0.728

6.011 ± 1.294

5.186 ± 1.143

6.011 ± 0.642

7.778 ± 1.153

4.891 ± 0.526

0.884 ± 0.108

6.187 ± 1.073
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski