Neoasaia chiangmaiensis

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Neoasaia

Average proteome isoelectric point is 6.69

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2999 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1U9KSH3|A0A1U9KSH3_9PROT Phosphatase OS=Neoasaia chiangmaiensis OX=320497 GN=A0U93_12965 PE=4 SV=1
MM1 pKa = 7.76AIVTVVGASGTHH13 pKa = 4.41VQVTVDD19 pKa = 3.48GGQTQRR25 pKa = 11.84LAQEE29 pKa = 4.37YY30 pKa = 7.78ATSIQNAFSGGTLDD44 pKa = 5.16VVDD47 pKa = 5.37LAPGSNQFASSAMSTVQGQITVGGSYY73 pKa = 9.2TLNGSYY79 pKa = 10.95TNVAVGALASNDD91 pKa = 3.76SPVTPLNGQVTINAAGSTGSSLSILTGNQGNTDD124 pKa = 3.48VTVGNQSGTFVAAAGTNAFHH144 pKa = 7.05GGDD147 pKa = 3.84STGDD151 pKa = 3.22WQIATGAGTTNTLSLGTGANYY172 pKa = 9.72VASEE176 pKa = 4.07GHH178 pKa = 5.97DD179 pKa = 3.95TIDD182 pKa = 3.6GAAGGTDD189 pKa = 3.31TVTLIGGSSLVSLQQNAAVVDD210 pKa = 4.7LSTGNNISVGDD221 pKa = 3.76NSTVFGGSGSSANFTGDD238 pKa = 2.38SSTIVGALGDD248 pKa = 4.23TISAASSLQVIHH260 pKa = 6.92GSNNDD265 pKa = 2.86ISVSGNLSFLNGTGTTTIAAGNATIFGASGLNAITSTMSSPALFVGNEE313 pKa = 4.0GPEE316 pKa = 4.36TVNGASSTSALHH328 pKa = 6.71AFAGSGNDD336 pKa = 3.38VLIGGSASDD345 pKa = 3.63TLVGGVGNATLTGGSGASNLFAITKK370 pKa = 9.73DD371 pKa = 3.51HH372 pKa = 7.14AGGNYY377 pKa = 9.03TITDD381 pKa = 4.46FGSAAGNITALYY393 pKa = 10.62NYY395 pKa = 9.81GLQNNNGLQSVLNNATVAGGNTTIQLSDD423 pKa = 3.07NSKK426 pKa = 8.04ITFVGVTDD434 pKa = 5.32LKK436 pKa = 11.38ASDD439 pKa = 4.38FNLSS443 pKa = 3.09

Molecular weight: 43.04 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1U9KP12|A0A1U9KP12_9PROT Transcriptional regulator OS=Neoasaia chiangmaiensis OX=320497 GN=A0U93_05840 PE=3 SV=1
MM1 pKa = 7.67RR2 pKa = 11.84FKK4 pKa = 11.26NFFFAAILGLATVAASPNTHH24 pKa = 6.5SDD26 pKa = 2.94AKK28 pKa = 9.71TQTTKK33 pKa = 10.64VASLRR38 pKa = 11.84QWPAPNATRR47 pKa = 11.84VASLRR52 pKa = 11.84QWPAPNAIRR61 pKa = 11.84VASLRR66 pKa = 11.84QWPAPNAIRR75 pKa = 11.84VASLRR80 pKa = 11.84QWPAPNATRR89 pKa = 11.84VASLRR94 pKa = 11.84QWPAPNATRR103 pKa = 11.84VASLRR108 pKa = 11.84QWPAPNAIRR117 pKa = 11.84VASLRR122 pKa = 11.84QWPAPNAIRR131 pKa = 11.84VASLRR136 pKa = 11.84QWPAPNAIRR145 pKa = 11.84VASLRR150 pKa = 11.84QWPAPNAIRR159 pKa = 11.84VASLRR164 pKa = 11.84QWPAPNAIRR173 pKa = 11.84VASLRR178 pKa = 11.84QWPAPNAIRR187 pKa = 11.84VASLRR192 pKa = 11.84QWPAPNATRR201 pKa = 11.84VAA203 pKa = 3.73

Molecular weight: 22.44 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2999

0

2999

985694

26

2850

328.7

35.73

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.257 ± 0.056

0.921 ± 0.014

5.888 ± 0.034

4.872 ± 0.04

3.507 ± 0.032

8.471 ± 0.051

2.509 ± 0.023

5.073 ± 0.029

2.446 ± 0.033

10.287 ± 0.053

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.506 ± 0.02

2.725 ± 0.029

5.503 ± 0.033

3.463 ± 0.03

7.648 ± 0.046

5.513 ± 0.034

5.646 ± 0.03

7.105 ± 0.037

1.432 ± 0.02

2.228 ± 0.026
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski