Odocoileus virginianus texanus

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia;

Average proteome isoelectric point is 6.74

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 37241 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6J0Z0U1|A0A6J0Z0U1_ODOVR C1GALT1-specific chaperone 1 OS=Odocoileus virginianus texanus OX=9880 GN=C1GALT1C1 PE=4 SV=1
MM1 pKa = 7.97DD2 pKa = 3.9VLFVAILAVPLILGQEE18 pKa = 4.24YY19 pKa = 10.59EE20 pKa = 4.39DD21 pKa = 4.58GEE23 pKa = 4.26EE24 pKa = 4.21LEE26 pKa = 4.16EE27 pKa = 4.75DD28 pKa = 3.66EE29 pKa = 5.06YY30 pKa = 11.76YY31 pKa = 10.47QVIYY35 pKa = 10.21YY36 pKa = 7.46YY37 pKa = 10.23TITPSYY43 pKa = 11.42DD44 pKa = 3.32DD45 pKa = 4.03FSVNFTVDD53 pKa = 2.96YY54 pKa = 11.66SMFEE58 pKa = 4.07PEE60 pKa = 3.94NTVNRR65 pKa = 11.84LDD67 pKa = 4.05EE68 pKa = 4.36KK69 pKa = 11.35VEE71 pKa = 3.95ASEE74 pKa = 4.16TTISYY79 pKa = 7.64EE80 pKa = 3.77TDD82 pKa = 3.16RR83 pKa = 11.84ADD85 pKa = 3.21HH86 pKa = 5.71QKK88 pKa = 10.62PVTEE92 pKa = 4.82KK93 pKa = 10.43PMTMEE98 pKa = 4.29PQSPDD103 pKa = 3.19LNDD106 pKa = 3.28AVSRR110 pKa = 11.84LQSSGSLLLFWALVRR125 pKa = 11.84GGMYY129 pKa = 10.61FLL131 pKa = 5.37

Molecular weight: 15.12 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6J0XUR7|A0A6J0XUR7_ODOVR Isoform of A0A6J0XUQ8 heterogeneous nuclear ribonucleoprotein L-like isoform X4 OS=Odocoileus virginianus texanus OX=9880 GN=HNRNPLL PE=4 SV=1
MM1 pKa = 7.07GQRR4 pKa = 11.84GSTCKK9 pKa = 10.09LARR12 pKa = 11.84SRR14 pKa = 11.84SRR16 pKa = 11.84SHH18 pKa = 5.5SRR20 pKa = 11.84SRR22 pKa = 11.84GRR24 pKa = 11.84RR25 pKa = 11.84YY26 pKa = 9.62SRR28 pKa = 11.84SRR30 pKa = 11.84SRR32 pKa = 11.84SRR34 pKa = 11.84GRR36 pKa = 11.84RR37 pKa = 11.84SRR39 pKa = 11.84SASPRR44 pKa = 11.84RR45 pKa = 11.84SRR47 pKa = 11.84SVSLRR52 pKa = 11.84RR53 pKa = 11.84SRR55 pKa = 11.84SASLRR60 pKa = 11.84RR61 pKa = 11.84SRR63 pKa = 11.84SGSIKK68 pKa = 9.99GSRR71 pKa = 11.84SRR73 pKa = 11.84SRR75 pKa = 11.84SRR77 pKa = 11.84SRR79 pKa = 11.84SRR81 pKa = 11.84SLSRR85 pKa = 11.84PRR87 pKa = 11.84SSRR90 pKa = 11.84SKK92 pKa = 10.67SRR94 pKa = 11.84SPSPKK99 pKa = 9.03RR100 pKa = 11.84SRR102 pKa = 11.84SPSGSPRR109 pKa = 11.84RR110 pKa = 11.84SASPEE115 pKa = 3.81RR116 pKa = 11.84VDD118 pKa = 3.84

Molecular weight: 13.41 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

20978

16263

37241

22674040

31

34236

608.8

67.83

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.998 ± 0.014

2.101 ± 0.009

4.818 ± 0.009

7.246 ± 0.017

3.551 ± 0.008

6.372 ± 0.017

2.561 ± 0.006

4.252 ± 0.011

5.795 ± 0.016

9.912 ± 0.019

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.147 ± 0.006

3.542 ± 0.008

6.42 ± 0.019

4.9 ± 0.015

5.783 ± 0.012

8.598 ± 0.017

5.304 ± 0.012

5.977 ± 0.011

1.154 ± 0.004

2.562 ± 0.007
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski