Pogona vitticeps (central bearded dragon)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Lepidosauria; Squamata;

Average proteome isoelectric point is 6.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 31185 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6J0V846|A0A6J0V846_9SAUR ninein OS=Pogona vitticeps OX=103695 GN=NIN PE=4 SV=1
MM1 pKa = 8.24DD2 pKa = 4.75FQQLADD8 pKa = 5.0VADD11 pKa = 4.29KK12 pKa = 10.12WCSSNPFEE20 pKa = 6.07LIATEE25 pKa = 3.96EE26 pKa = 4.32TEE28 pKa = 4.33RR29 pKa = 11.84RR30 pKa = 11.84MDD32 pKa = 4.29FYY34 pKa = 11.47ADD36 pKa = 3.74PGVSFYY42 pKa = 10.98VLCPDD47 pKa = 4.64NGCGDD52 pKa = 3.96NFHH55 pKa = 6.3VWSEE59 pKa = 4.48SEE61 pKa = 3.97DD62 pKa = 3.63CLPFLQLAQDD72 pKa = 4.45YY73 pKa = 10.71ISSCGKK79 pKa = 8.61KK80 pKa = 7.74TLHH83 pKa = 6.85EE84 pKa = 4.21ILEE87 pKa = 4.3KK88 pKa = 10.47VLRR91 pKa = 11.84SFRR94 pKa = 11.84PLLGLPDD101 pKa = 3.71VDD103 pKa = 4.94DD104 pKa = 5.38DD105 pKa = 5.61AFEE108 pKa = 4.61EE109 pKa = 4.49YY110 pKa = 10.57NADD113 pKa = 3.67VEE115 pKa = 4.42EE116 pKa = 4.81EE117 pKa = 4.01EE118 pKa = 5.78AEE120 pKa = 4.39ADD122 pKa = 3.72HH123 pKa = 6.16QQMGVSQQQ131 pKa = 2.96

Molecular weight: 14.97 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6J0TZQ6|A0A6J0TZQ6_9SAUR myelin proteolipid protein isoform X1 OS=Pogona vitticeps OX=103695 GN=PLP1 PE=3 SV=1
MM1 pKa = 7.78RR2 pKa = 11.84GGMPLPGPHH11 pKa = 6.61ISSGNGPPMRR21 pKa = 11.84GGMSLPGPHH30 pKa = 6.74ISSGNGPPIRR40 pKa = 11.84GGMSLPGPRR49 pKa = 11.84ISSGNGPPLRR59 pKa = 11.84GGMPLPGPHH68 pKa = 6.82ISSGHH73 pKa = 5.39GPLMRR78 pKa = 11.84GGMPLPGPHH87 pKa = 6.61ISSGNGPPMRR97 pKa = 11.84GGMSLPGPHH106 pKa = 6.74ISSGNGPPIRR116 pKa = 11.84GGMSLPGPRR125 pKa = 11.84ISSGNGPPLRR135 pKa = 11.84GGMPLPGPHH144 pKa = 6.82ISSGHH149 pKa = 5.39GPLMRR154 pKa = 11.84GGMPLPGPHH163 pKa = 6.61ISSGNGPPMRR173 pKa = 11.84GGMSLPGPHH182 pKa = 6.74ISSGNGPPIRR192 pKa = 11.84GGMSLPGPRR201 pKa = 11.84ISSGNGPPLRR211 pKa = 11.84GGMPLPGPHH220 pKa = 6.82ISSGHH225 pKa = 5.39GPLMRR230 pKa = 11.84GGMPLPGPHH239 pKa = 6.61ISSGNGPPMRR249 pKa = 11.84GGMSLPGPHH258 pKa = 6.91ISSAHH263 pKa = 5.42GPPMRR268 pKa = 11.84GGMSLPGPHH277 pKa = 6.77ISGNGRR283 pKa = 11.84PIRR286 pKa = 11.84GGMPLPGPHH295 pKa = 6.59ISSGNGRR302 pKa = 11.84PMRR305 pKa = 11.84GGMPLPGPHH314 pKa = 6.76ISSS317 pKa = 3.63

Molecular weight: 30.93 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

18868

12317

31185

20298321

31

35430

650.9

72.89

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.536 ± 0.012

2.175 ± 0.011

4.919 ± 0.009

7.523 ± 0.016

3.61 ± 0.01

6.018 ± 0.014

2.644 ± 0.007

4.645 ± 0.011

6.34 ± 0.014

9.521 ± 0.019

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.263 ± 0.005

3.989 ± 0.008

5.742 ± 0.017

4.889 ± 0.014

5.408 ± 0.01

8.604 ± 0.017

5.405 ± 0.009

5.895 ± 0.011

1.121 ± 0.005

2.738 ± 0.007
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski