Odonata-associated circular virus-16

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 7.85

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0B4UGW2|A0A0B4UGW2_9VIRU Putative capsid protein OS=Odonata-associated circular virus-16 OX=1592116 PE=4 SV=1
MM1 pKa = 6.95PRR3 pKa = 11.84KK4 pKa = 9.13MEE6 pKa = 4.27SLEE9 pKa = 4.04SSGGGNSIPPPIKK22 pKa = 9.83EE23 pKa = 3.69KK24 pKa = 10.83RR25 pKa = 11.84MNQGRR30 pKa = 11.84RR31 pKa = 11.84WCFTWNNYY39 pKa = 9.2DD40 pKa = 4.0DD41 pKa = 4.71NVVTAIKK48 pKa = 10.25EE49 pKa = 4.03RR50 pKa = 11.84LEE52 pKa = 4.21SKK54 pKa = 10.68DD55 pKa = 2.86ILRR58 pKa = 11.84YY59 pKa = 9.54IVGFEE64 pKa = 3.6IGEE67 pKa = 4.3KK68 pKa = 10.36EE69 pKa = 4.2KK70 pKa = 10.47TPHH73 pKa = 5.19LQGYY77 pKa = 8.31FEE79 pKa = 4.37FTGQIARR86 pKa = 11.84RR87 pKa = 11.84PSEE90 pKa = 3.43MWDD93 pKa = 3.25NYY95 pKa = 10.58NLGRR99 pKa = 11.84FFKK102 pKa = 10.92CKK104 pKa = 8.74GTAEE108 pKa = 4.14EE109 pKa = 3.93NHH111 pKa = 6.76AYY113 pKa = 10.04CSKK116 pKa = 10.37SGNYY120 pKa = 8.19FQGGDD125 pKa = 3.08WSILKK130 pKa = 10.28NKK132 pKa = 9.48EE133 pKa = 3.77PLPIEE138 pKa = 4.11VLKK141 pKa = 11.31DD142 pKa = 2.97EE143 pKa = 5.21DD144 pKa = 4.67LYY146 pKa = 10.71PFQKK150 pKa = 10.58SIIDD154 pKa = 4.09IIDD157 pKa = 3.73GPVIKK162 pKa = 10.48GHH164 pKa = 5.66IHH166 pKa = 6.99WICDD170 pKa = 3.45LKK172 pKa = 10.84GQNGKK177 pKa = 7.95TEE179 pKa = 4.5LLRR182 pKa = 11.84KK183 pKa = 9.74LVVEE187 pKa = 4.53RR188 pKa = 11.84NLKK191 pKa = 8.25FTYY194 pKa = 9.98GGKK197 pKa = 9.91KK198 pKa = 9.94ADD200 pKa = 4.45IINLIYY206 pKa = 10.77NNKK209 pKa = 9.62QYY211 pKa = 11.64YY212 pKa = 8.24LTTKK216 pKa = 9.38NAAMVYY222 pKa = 9.86NLGRR226 pKa = 11.84SEE228 pKa = 4.79DD229 pKa = 3.96LEE231 pKa = 4.41KK232 pKa = 11.11VSYY235 pKa = 10.74TSMEE239 pKa = 4.11QISDD243 pKa = 3.65GLISNTKK250 pKa = 9.79YY251 pKa = 8.95EE252 pKa = 4.26TGCFVMNHH260 pKa = 4.9PHH262 pKa = 7.15IIVLANGMPSIRR274 pKa = 11.84SMTMSRR280 pKa = 11.84WIIYY284 pKa = 9.25KK285 pKa = 10.33INDD288 pKa = 3.34AKK290 pKa = 10.43EE291 pKa = 3.99LEE293 pKa = 4.37RR294 pKa = 11.84IEE296 pKa = 4.46YY297 pKa = 9.65EE298 pKa = 3.98SHH300 pKa = 6.86SNLGSPLDD308 pKa = 4.46DD309 pKa = 5.15LDD311 pKa = 3.64NN312 pKa = 4.35

Molecular weight: 36.03 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0B4UGW2|A0A0B4UGW2_9VIRU Putative capsid protein OS=Odonata-associated circular virus-16 OX=1592116 PE=4 SV=1
MM1 pKa = 6.85VRR3 pKa = 11.84SRR5 pKa = 11.84SRR7 pKa = 11.84SRR9 pKa = 11.84TSYY12 pKa = 9.8RR13 pKa = 11.84KK14 pKa = 8.93KK15 pKa = 9.44VSVKK19 pKa = 9.85RR20 pKa = 11.84RR21 pKa = 11.84VPRR24 pKa = 11.84TRR26 pKa = 11.84KK27 pKa = 9.81GVTVPVKK34 pKa = 10.55KK35 pKa = 10.39YY36 pKa = 7.12VQKK39 pKa = 10.74AIHH42 pKa = 5.86RR43 pKa = 11.84QIEE46 pKa = 4.38NKK48 pKa = 9.68CVQFNGAFTMVNYY61 pKa = 10.84ADD63 pKa = 4.6DD64 pKa = 3.53NTMRR68 pKa = 11.84GFALSPGTSISIAQGTGSADD88 pKa = 3.39RR89 pKa = 11.84TGNRR93 pKa = 11.84IKK95 pKa = 10.32IIKK98 pKa = 9.37GKK100 pKa = 9.7LVYY103 pKa = 10.31WMVPTAYY110 pKa = 10.29NGLLNPQPKK119 pKa = 9.71PLMVRR124 pKa = 11.84LWIGYY129 pKa = 9.54SKK131 pKa = 9.83TNPTLIPPAGDD142 pKa = 3.08QAVLFQNGNTASPPNGFINDD162 pKa = 3.65MLRR165 pKa = 11.84SVNKK169 pKa = 10.1DD170 pKa = 2.68KK171 pKa = 11.1FVIFRR176 pKa = 11.84DD177 pKa = 3.53IKK179 pKa = 10.83HH180 pKa = 5.93KK181 pKa = 10.75LGYY184 pKa = 10.27EE185 pKa = 4.4SITGTGFVAGSQYY198 pKa = 10.49FANNDD203 pKa = 3.17FKK205 pKa = 11.37FNIMRR210 pKa = 11.84TIDD213 pKa = 3.13ITKK216 pKa = 9.76YY217 pKa = 10.48LINNVIYY224 pKa = 10.64NDD226 pKa = 3.45TTAIPTSRR234 pKa = 11.84GLFCWVQIVYY244 pKa = 10.86ADD246 pKa = 3.78NNVTTGTIPANFNYY260 pKa = 9.68FVDD263 pKa = 4.5LTYY266 pKa = 11.34EE267 pKa = 4.05DD268 pKa = 3.87AA269 pKa = 5.76

Molecular weight: 30.31 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

581

269

312

290.5

33.17

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.303 ± 1.07

1.205 ± 0.3

5.164 ± 0.215

4.819 ± 2.41

4.131 ± 0.698

7.401 ± 0.22

1.549 ± 0.524

8.434 ± 0.408

7.917 ± 0.556

6.368 ± 0.999

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.926 ± 0.211

7.917 ± 0.412

4.647 ± 0.363

2.926 ± 0.273

5.68 ± 0.658

6.196 ± 0.403

6.196 ± 1.531

5.68 ± 1.625

1.549 ± 0.282

4.991 ± 0.103
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski