Alternanthera yellow vein betasatellite

Taxonomy: Viruses; Tolecusatellitidae; Betasatellite

Average proteome isoelectric point is 4.92

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A5H1G0|A5H1G0_9VIRU C1 protein OS=Alternanthera yellow vein betasatellite OX=447606 GN=C1 PE=4 SV=1
MM1 pKa = 7.23TIKK4 pKa = 10.82YY5 pKa = 9.38NNKK8 pKa = 9.72KK9 pKa = 10.34GMEE12 pKa = 4.37FIINVKK18 pKa = 10.29LKK20 pKa = 9.15EE21 pKa = 4.38DD22 pKa = 3.44NSIVVQIEE30 pKa = 4.42LISTKK35 pKa = 10.57SPALAKK41 pKa = 10.17KK42 pKa = 10.06IYY44 pKa = 8.31TISYY48 pKa = 7.95AHH50 pKa = 6.74SGIIPPFNFNNLEE63 pKa = 3.86EE64 pKa = 4.97GIRR67 pKa = 11.84NLLRR71 pKa = 11.84IMYY74 pKa = 9.37KK75 pKa = 10.15EE76 pKa = 3.66STIRR80 pKa = 11.84DD81 pKa = 4.08FKK83 pKa = 11.11QEE85 pKa = 4.48DD86 pKa = 3.8MVQTIDD92 pKa = 3.2ILMMQEE98 pKa = 3.74AAVEE102 pKa = 4.43DD103 pKa = 3.96IEE105 pKa = 6.04IEE107 pKa = 4.06DD108 pKa = 4.11EE109 pKa = 4.27YY110 pKa = 11.46GIGTIASII118 pKa = 4.47

Molecular weight:
13.53 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A5H1G0|A5H1G0_9VIRU C1 protein OS=Alternanthera yellow vein betasatellite OX=447606 GN=C1 PE=4 SV=1
MM1 pKa = 7.23TIKK4 pKa = 10.82YY5 pKa = 9.38NNKK8 pKa = 9.72KK9 pKa = 10.34GMEE12 pKa = 4.37FIINVKK18 pKa = 10.29LKK20 pKa = 9.15EE21 pKa = 4.38DD22 pKa = 3.44NSIVVQIEE30 pKa = 4.42LISTKK35 pKa = 10.57SPALAKK41 pKa = 10.17KK42 pKa = 10.06IYY44 pKa = 8.31TISYY48 pKa = 7.95AHH50 pKa = 6.74SGIIPPFNFNNLEE63 pKa = 3.86EE64 pKa = 4.97GIRR67 pKa = 11.84NLLRR71 pKa = 11.84IMYY74 pKa = 9.37KK75 pKa = 10.15EE76 pKa = 3.66STIRR80 pKa = 11.84DD81 pKa = 4.08FKK83 pKa = 11.11QEE85 pKa = 4.48DD86 pKa = 3.8MVQTIDD92 pKa = 3.2ILMMQEE98 pKa = 3.74AAVEE102 pKa = 4.43DD103 pKa = 3.96IEE105 pKa = 6.04IEE107 pKa = 4.06DD108 pKa = 4.11EE109 pKa = 4.27YY110 pKa = 11.46GIGTIASII118 pKa = 4.47

Molecular weight:
13.53 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

118

118

118

118.0

13.53

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.085 ± 0.0

0.0 ± 0.0

5.085 ± 0.0

10.169 ± 0.0

3.39 ± 0.0

4.237 ± 0.0

0.847 ± 0.0

16.949 ± 0.0

8.475 ± 0.0

5.932 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

5.085 ± 0.0

6.78 ± 0.0

2.542 ± 0.0

3.39 ± 0.0

2.542 ± 0.0

5.932 ± 0.0

5.085 ± 0.0

4.237 ± 0.0

0.0 ± 0.0

4.237 ± 0.0

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski