Amino acid dipepetide frequency for Wenling frogfish arenavirus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
3.497AlaAla: 3.497 ± 0.672
1.614AlaCys: 1.614 ± 0.941
2.69AlaAsp: 2.69 ± 0.6
5.112AlaGlu: 5.112 ± 0.676
1.883AlaPhe: 1.883 ± 0.506
2.421AlaGly: 2.421 ± 0.806
0.807AlaHis: 0.807 ± 0.56
1.883AlaIle: 1.883 ± 0.418
3.497AlaLys: 3.497 ± 1.171
4.843AlaLeu: 4.843 ± 0.934
1.883AlaMet: 1.883 ± 0.799
2.69AlaAsn: 2.69 ± 0.753
0.807AlaPro: 0.807 ± 0.694
1.345AlaGln: 1.345 ± 1.224
1.345AlaArg: 1.345 ± 0.399
5.381AlaSer: 5.381 ± 1.326
3.228AlaThr: 3.228 ± 0.773
3.228AlaVal: 3.228 ± 0.839
0.269AlaTrp: 0.269 ± 0.323
1.345AlaTyr: 1.345 ± 0.194
0.0AlaXaa: 0.0 ± 0.0
Cys
0.269CysAla: 0.269 ± 0.323
0.538CysCys: 0.538 ± 0.448
0.807CysAsp: 0.807 ± 0.271
4.305CysGlu: 4.305 ± 0.426
1.883CysPhe: 1.883 ± 0.834
2.152CysGly: 2.152 ± 1.062
0.807CysHis: 0.807 ± 0.312
3.228CysIle: 3.228 ± 0.388
1.345CysLys: 1.345 ± 0.399
4.574CysLeu: 4.574 ± 1.275
0.807CysMet: 0.807 ± 0.253
1.614CysAsn: 1.614 ± 0.492
1.614CysPro: 1.614 ± 0.625
0.0CysGln: 0.0 ± 0.0
2.152CysArg: 2.152 ± 0.924
2.959CysSer: 2.959 ± 0.713
1.345CysThr: 1.345 ± 0.741
1.883CysVal: 1.883 ± 0.592
0.269CysTrp: 0.269 ± 0.157
1.345CysTyr: 1.345 ± 0.553
0.0CysXaa: 0.0 ± 0.0
Asp
2.421AspAla: 2.421 ± 0.334
2.421AspCys: 2.421 ± 0.534
3.497AspAsp: 3.497 ± 1.592
2.69AspGlu: 2.69 ± 0.61
2.69AspPhe: 2.69 ± 0.789
4.574AspGly: 4.574 ± 1.184
1.076AspHis: 1.076 ± 0.627
3.766AspIle: 3.766 ± 1.377
1.345AspLys: 1.345 ± 0.194
5.65AspLeu: 5.65 ± 1.309
1.614AspMet: 1.614 ± 0.874
2.152AspAsn: 2.152 ± 1.067
3.766AspPro: 3.766 ± 1.403
0.538AspGln: 0.538 ± 0.231
2.959AspArg: 2.959 ± 1.105
5.919AspSer: 5.919 ± 1.481
1.614AspThr: 1.614 ± 0.359
2.959AspVal: 2.959 ± 0.693
1.614AspTrp: 1.614 ± 0.793
1.883AspTyr: 1.883 ± 0.775
0.0AspXaa: 0.0 ± 0.0
Glu
4.305GluAla: 4.305 ± 0.812
1.883GluCys: 1.883 ± 0.592
5.112GluAsp: 5.112 ± 1.104
8.878GluGlu: 8.878 ± 1.129
4.305GluPhe: 4.305 ± 1.124
4.574GluGly: 4.574 ± 0.989
1.614GluHis: 1.614 ± 0.468
4.843GluIle: 4.843 ± 0.752
5.919GluLys: 5.919 ± 0.906
6.457GluLeu: 6.457 ± 1.141
2.421GluMet: 2.421 ± 1.076
3.228GluAsn: 3.228 ± 0.557
2.421GluPro: 2.421 ± 0.94
2.69GluGln: 2.69 ± 1.534
5.381GluArg: 5.381 ± 0.718
4.843GluSer: 4.843 ± 1.492
4.843GluThr: 4.843 ± 0.59
6.995GluVal: 6.995 ± 1.527
0.269GluTrp: 0.269 ± 0.157
1.883GluTyr: 1.883 ± 0.773
0.0GluXaa: 0.0 ± 0.0
Phe
0.538PheAla: 0.538 ± 0.231
2.959PheCys: 2.959 ± 1.681
1.614PheAsp: 1.614 ± 0.928
1.345PheGlu: 1.345 ± 0.194
1.076PhePhe: 1.076 ± 0.627
3.766PheGly: 3.766 ± 1.572
0.538PheHis: 0.538 ± 0.989
2.152PheIle: 2.152 ± 0.331
3.228PheLys: 3.228 ± 0.943
4.305PheLeu: 4.305 ± 0.381
1.883PheMet: 1.883 ± 0.374
2.152PheAsn: 2.152 ± 0.681
1.883PhePro: 1.883 ± 0.277
1.345PheGln: 1.345 ± 0.444
1.614PheArg: 1.614 ± 0.506
4.574PheSer: 4.574 ± 0.433
2.959PheThr: 2.959 ± 0.961
0.807PheVal: 0.807 ± 0.56
0.538PheTrp: 0.538 ± 0.231
1.076PheTyr: 1.076 ± 0.463
0.0PheXaa: 0.0 ± 0.0
Gly
4.574GlyAla: 4.574 ± 0.626
1.614GlyCys: 1.614 ± 1.034
2.152GlyAsp: 2.152 ± 0.732
4.843GlyGlu: 4.843 ± 0.334
2.69GlyPhe: 2.69 ± 1.244
2.69GlyGly: 2.69 ± 0.359
1.076GlyHis: 1.076 ± 0.453
3.497GlyIle: 3.497 ± 0.562
5.65GlyLys: 5.65 ± 1.001
6.188GlyLeu: 6.188 ± 0.344
1.883GlyMet: 1.883 ± 0.681
1.614GlyAsn: 1.614 ± 0.306
1.614GlyPro: 1.614 ± 0.286
1.076GlyGln: 1.076 ± 0.351
3.228GlyArg: 3.228 ± 0.866
5.919GlySer: 5.919 ± 1.013
3.497GlyThr: 3.497 ± 0.177
3.228GlyVal: 3.228 ± 1.39
0.807GlyTrp: 0.807 ± 0.47
1.076GlyTyr: 1.076 ± 0.562
0.0GlyXaa: 0.0 ± 0.0
His
0.0HisAla: 0.0 ± 0.0
0.807HisCys: 0.807 ± 0.271
1.345HisAsp: 1.345 ± 0.741
0.269HisGlu: 0.269 ± 0.494
0.807HisPhe: 0.807 ± 0.312
1.076HisGly: 1.076 ± 0.507
0.538HisHis: 0.538 ± 0.231
2.69HisIle: 2.69 ± 0.682
1.614HisLys: 1.614 ± 0.625
2.152HisLeu: 2.152 ± 1.067
1.345HisMet: 1.345 ± 0.481
1.345HisAsn: 1.345 ± 0.481
1.883HisPro: 1.883 ± 0.592
0.538HisGln: 0.538 ± 0.457
0.538HisArg: 0.538 ± 0.231
1.614HisSer: 1.614 ± 0.506
0.269HisThr: 0.269 ± 0.323
1.076HisVal: 1.076 ± 0.207
0.269HisTrp: 0.269 ± 0.157
0.269HisTyr: 0.269 ± 0.157
0.0HisXaa: 0.0 ± 0.0
Ile
2.69IleAla: 2.69 ± 0.889
1.883IleCys: 1.883 ± 0.506
3.766IleAsp: 3.766 ± 1.745
5.112IleGlu: 5.112 ± 1.033
0.807IlePhe: 0.807 ± 0.517
3.497IleGly: 3.497 ± 0.984
1.345IleHis: 1.345 ± 0.741
2.959IleIle: 2.959 ± 0.708
3.766IleLys: 3.766 ± 0.644
4.574IleLeu: 4.574 ± 1.163
1.883IleMet: 1.883 ± 0.43
1.614IleAsn: 1.614 ± 0.541
2.421IlePro: 2.421 ± 0.241
2.152IleGln: 2.152 ± 0.373
4.036IleArg: 4.036 ± 0.791
5.919IleSer: 5.919 ± 1.075
4.574IleThr: 4.574 ± 1.999
1.883IleVal: 1.883 ± 0.62
1.076IleTrp: 1.076 ± 0.207
1.614IleTyr: 1.614 ± 0.941
0.0IleXaa: 0.0 ± 0.0
Lys
6.188LysAla: 6.188 ± 1.574
1.883LysCys: 1.883 ± 0.588
4.036LysAsp: 4.036 ± 0.975
4.574LysGlu: 4.574 ± 0.387
2.69LysPhe: 2.69 ± 1.259
5.919LysGly: 5.919 ± 0.633
2.152LysHis: 2.152 ± 0.379
2.959LysIle: 2.959 ± 1.072
3.497LysLys: 3.497 ± 0.572
7.802LysLeu: 7.802 ± 2.383
1.883LysMet: 1.883 ± 0.474
2.421LysAsn: 2.421 ± 0.94
1.883LysPro: 1.883 ± 0.681
2.69LysGln: 2.69 ± 0.61
4.843LysArg: 4.843 ± 1.022
5.112LysSer: 5.112 ± 0.676
3.228LysThr: 3.228 ± 1.017
4.305LysVal: 4.305 ± 1.146
1.614LysTrp: 1.614 ± 0.628
1.614LysTyr: 1.614 ± 0.506
0.0LysXaa: 0.0 ± 0.0
Leu
3.497LeuAla: 3.497 ± 1.566
4.036LeuCys: 4.036 ± 1.446
5.112LeuAsp: 5.112 ± 0.494
6.995LeuGlu: 6.995 ± 3.359
4.574LeuPhe: 4.574 ± 0.985
4.305LeuGly: 4.305 ± 0.356
1.614LeuHis: 1.614 ± 0.747
7.533LeuIle: 7.533 ± 0.723
5.112LeuLys: 5.112 ± 0.866
9.954LeuLeu: 9.954 ± 2.542
5.112LeuMet: 5.112 ± 0.488
4.574LeuAsn: 4.574 ± 0.879
4.305LeuPro: 4.305 ± 1.846
3.228LeuGln: 3.228 ± 1.174
6.457LeuArg: 6.457 ± 0.388
10.761LeuSer: 10.761 ± 1.134
6.995LeuThr: 6.995 ± 0.999
3.228LeuVal: 3.228 ± 0.633
0.807LeuTrp: 0.807 ± 0.72
1.614LeuTyr: 1.614 ± 0.468
0.0LeuXaa: 0.0 ± 0.0
Met
2.421MetAla: 2.421 ± 0.467
1.614MetCys: 1.614 ± 0.506
1.883MetAsp: 1.883 ± 1.298
3.497MetGlu: 3.497 ± 1.08
1.614MetPhe: 1.614 ± 0.286
1.883MetGly: 1.883 ± 0.799
0.538MetHis: 0.538 ± 0.448
1.614MetIle: 1.614 ± 0.575
3.228MetLys: 3.228 ± 0.863
1.614MetLeu: 1.614 ± 0.694
1.076MetMet: 1.076 ± 0.351
1.614MetAsn: 1.614 ± 0.506
0.538MetPro: 0.538 ± 0.231
1.076MetGln: 1.076 ± 0.351
1.345MetArg: 1.345 ± 0.451
3.228MetSer: 3.228 ± 0.803
1.883MetThr: 1.883 ± 0.41
2.959MetVal: 2.959 ± 0.134
0.0MetTrp: 0.0 ± 0.0
0.538MetTyr: 0.538 ± 0.231
0.0MetXaa: 0.0 ± 0.0
Asn
2.69AsnAla: 2.69 ± 0.951
1.614AsnCys: 1.614 ± 0.625
3.497AsnAsp: 3.497 ± 1.104
2.69AsnGlu: 2.69 ± 1.157
0.807AsnPhe: 0.807 ± 0.939
1.883AsnGly: 1.883 ± 0.506
1.076AsnHis: 1.076 ± 0.207
2.152AsnIle: 2.152 ± 0.379
3.497AsnLys: 3.497 ± 1.398
4.574AsnLeu: 4.574 ± 1.163
1.076AsnMet: 1.076 ± 1.293
1.614AsnAsn: 1.614 ± 0.359
2.152AsnPro: 2.152 ± 1.014
1.076AsnGln: 1.076 ± 0.627
2.959AsnArg: 2.959 ± 0.442
2.959AsnSer: 2.959 ± 0.939
1.076AsnThr: 1.076 ± 0.207
1.614AsnVal: 1.614 ± 0.694
0.807AsnTrp: 0.807 ± 0.271
1.345AsnTyr: 1.345 ± 0.481
0.0AsnXaa: 0.0 ± 0.0
Pro
1.883ProAla: 1.883 ± 0.418
0.807ProCys: 0.807 ± 0.471
1.614ProAsp: 1.614 ± 0.286
5.381ProGlu: 5.381 ± 1.368
1.614ProPhe: 1.614 ± 0.286
1.614ProGly: 1.614 ± 0.625
0.807ProHis: 0.807 ± 0.271
1.883ProIle: 1.883 ± 0.418
3.497ProLys: 3.497 ± 0.672
4.574ProLeu: 4.574 ± 1.219
0.538ProMet: 0.538 ± 0.254
1.883ProAsn: 1.883 ± 0.474
1.076ProPro: 1.076 ± 0.351
1.883ProGln: 1.883 ± 0.856
1.345ProArg: 1.345 ± 0.194
1.883ProSer: 1.883 ± 0.374
2.69ProThr: 2.69 ± 0.663
2.421ProVal: 2.421 ± 0.496
0.807ProTrp: 0.807 ± 0.253
0.269ProTyr: 0.269 ± 0.494
0.0ProXaa: 0.0 ± 0.0
Gln
2.152GlnAla: 2.152 ± 0.415
1.076GlnCys: 1.076 ± 0.627
0.269GlnAsp: 0.269 ± 0.157
2.421GlnGlu: 2.421 ± 0.37
1.614GlnPhe: 1.614 ± 0.492
2.69GlnGly: 2.69 ± 0.389
0.538GlnHis: 0.538 ± 0.231
1.345GlnIle: 1.345 ± 0.459
3.228GlnLys: 3.228 ± 0.853
1.614GlnLeu: 1.614 ± 0.793
0.538GlnMet: 0.538 ± 0.254
1.076GlnAsn: 1.076 ± 0.414
0.807GlnPro: 0.807 ± 0.471
0.269GlnGln: 0.269 ± 0.157
0.538GlnArg: 0.538 ± 0.231
1.883GlnSer: 1.883 ± 0.636
1.076GlnThr: 1.076 ± 0.562
2.421GlnVal: 2.421 ± 0.754
0.269GlnTrp: 0.269 ± 0.157
0.538GlnTyr: 0.538 ± 0.457
0.0GlnXaa: 0.0 ± 0.0
Arg
2.959ArgAla: 2.959 ± 1.115
1.614ArgCys: 1.614 ± 1.142
3.766ArgAsp: 3.766 ± 0.83
4.574ArgGlu: 4.574 ± 0.53
1.883ArgPhe: 1.883 ± 0.636
3.497ArgGly: 3.497 ± 0.585
1.076ArgHis: 1.076 ± 0.463
2.152ArgIle: 2.152 ± 0.331
5.919ArgLys: 5.919 ± 2.042
5.919ArgLeu: 5.919 ± 1.075
1.883ArgMet: 1.883 ± 0.773
2.421ArgAsn: 2.421 ± 0.496
2.421ArgPro: 2.421 ± 0.4
0.807ArgGln: 0.807 ± 0.471
2.959ArgArg: 2.959 ± 0.758
5.112ArgSer: 5.112 ± 0.873
2.421ArgThr: 2.421 ± 0.828
3.228ArgVal: 3.228 ± 0.303
0.538ArgTrp: 0.538 ± 0.314
1.614ArgTyr: 1.614 ± 0.941
0.0ArgXaa: 0.0 ± 0.0
Ser
3.497SerAla: 3.497 ± 1.743
3.766SerCys: 3.766 ± 0.64
7.264SerAsp: 7.264 ± 0.908
8.071SerGlu: 8.071 ± 1.148
2.69SerPhe: 2.69 ± 0.745
4.305SerGly: 4.305 ± 1.438
1.614SerHis: 1.614 ± 0.625
4.036SerIle: 4.036 ± 0.609
5.65SerLys: 5.65 ± 1.706
11.838SerLeu: 11.838 ± 0.437
4.036SerMet: 4.036 ± 0.374
1.345SerAsn: 1.345 ± 0.481
3.228SerPro: 3.228 ± 0.491
1.883SerGln: 1.883 ± 0.506
5.919SerArg: 5.919 ± 0.906
5.65SerSer: 5.65 ± 1.138
3.766SerThr: 3.766 ± 1.049
5.65SerVal: 5.65 ± 1.266
0.807SerTrp: 0.807 ± 0.662
1.883SerTyr: 1.883 ± 0.948
0.0SerXaa: 0.0 ± 0.0
Thr
3.497ThrAla: 3.497 ± 1.547
1.614ThrCys: 1.614 ± 0.286
2.69ThrAsp: 2.69 ± 1.23
2.421ThrGlu: 2.421 ± 0.241
1.614ThrPhe: 1.614 ± 1.06
3.766ThrGly: 3.766 ± 1.17
1.345ThrHis: 1.345 ± 0.459
2.69ThrIle: 2.69 ± 1.141
2.959ThrLys: 2.959 ± 0.709
4.305ThrLeu: 4.305 ± 0.464
1.614ThrMet: 1.614 ± 0.497
2.69ThrAsn: 2.69 ± 0.951
3.766ThrPro: 3.766 ± 1.032
1.883ThrGln: 1.883 ± 0.856
2.152ThrArg: 2.152 ± 0.373
6.188ThrSer: 6.188 ± 1.001
2.959ThrThr: 2.959 ± 1.019
3.228ThrVal: 3.228 ± 0.571
1.076ThrTrp: 1.076 ± 0.878
1.076ThrTyr: 1.076 ± 0.463
0.0ThrXaa: 0.0 ± 0.0
Val
2.152ValAla: 2.152 ± 1.372
0.538ValCys: 0.538 ± 0.457
2.421ValAsp: 2.421 ± 0.241
6.726ValGlu: 6.726 ± 1.617
2.959ValPhe: 2.959 ± 1.379
2.69ValGly: 2.69 ± 0.588
0.807ValHis: 0.807 ± 0.271
3.766ValIle: 3.766 ± 0.83
5.112ValLys: 5.112 ± 2.522
4.036ValLeu: 4.036 ± 0.212
1.345ValMet: 1.345 ± 0.481
2.69ValAsn: 2.69 ± 0.962
1.076ValPro: 1.076 ± 0.717
1.345ValGln: 1.345 ± 0.459
4.036ValArg: 4.036 ± 1.31
4.574ValSer: 4.574 ± 1.75
3.766ValThr: 3.766 ± 0.554
4.574ValVal: 4.574 ± 0.562
1.076ValTrp: 1.076 ± 0.562
1.076ValTyr: 1.076 ± 0.362
0.0ValXaa: 0.0 ± 0.0
Trp
0.269TrpAla: 0.269 ± 0.323
0.538TrpCys: 0.538 ± 0.448
0.807TrpAsp: 0.807 ± 0.271
1.345TrpGlu: 1.345 ± 0.631
0.538TrpPhe: 0.538 ± 0.254
0.807TrpGly: 0.807 ± 0.253
0.538TrpHis: 0.538 ± 0.254
0.269TrpIle: 0.269 ± 0.157
1.883TrpLys: 1.883 ± 0.703
1.345TrpLeu: 1.345 ± 0.444
0.269TrpMet: 0.269 ± 0.157
0.807TrpAsn: 0.807 ± 0.47
0.0TrpPro: 0.0 ± 0.0
0.269TrpGln: 0.269 ± 0.157
1.345TrpArg: 1.345 ± 0.847
0.538TrpSer: 0.538 ± 0.314
0.538TrpThr: 0.538 ± 0.254
0.538TrpVal: 0.538 ± 0.314
0.0TrpTrp: 0.0 ± 0.0
0.269TrpTyr: 0.269 ± 0.323
0.0TrpXaa: 0.0 ± 0.0
Tyr
0.269TyrAla: 0.269 ± 0.157
1.076TyrCys: 1.076 ± 0.523
0.807TyrAsp: 0.807 ± 0.47
1.614TyrGlu: 1.614 ± 0.492
1.614TyrPhe: 1.614 ± 0.306
0.807TyrGly: 0.807 ± 0.471
0.538TyrHis: 0.538 ± 0.231
2.152TyrIle: 2.152 ± 0.373
1.345TyrLys: 1.345 ± 0.757
3.497TyrLeu: 3.497 ± 0.956
0.807TyrMet: 0.807 ± 0.253
1.614TyrAsn: 1.614 ± 0.874
0.807TyrPro: 0.807 ± 0.517
0.269TyrGln: 0.269 ± 0.157
1.614TyrArg: 1.614 ± 0.625
1.883TyrSer: 1.883 ± 0.418
1.076TyrThr: 1.076 ± 0.627
0.538TyrVal: 0.538 ± 0.254
0.0TyrTrp: 0.0 ± 0.0
0.538TyrTyr: 0.538 ± 0.314
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 4 proteins (3718 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski