Ophiocordyceps polyrhachis-furcata BCC 54312

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Hypocreales; Ophiocordycipitaceae; Ophiocordyceps; Ophiocordyceps polyrhachis-furcata

Average proteome isoelectric point is 7.18

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10104 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A367L433|A0A367L433_9HYPO PPM-type phosphatase domain-containing protein OS=Ophiocordyceps polyrhachis-furcata BCC 54312 OX=1330021 GN=L249_1507 PE=3 SV=1
MM1 pKa = 7.34GGAAITEE8 pKa = 4.08RR9 pKa = 11.84CGYY12 pKa = 10.37GDD14 pKa = 5.04GIGSTAGCDD23 pKa = 3.54RR24 pKa = 11.84KK25 pKa = 10.38NHH27 pKa = 6.16FAVSHH32 pKa = 5.41YY33 pKa = 10.75LQATASAGYY42 pKa = 9.56SYY44 pKa = 10.48RR45 pKa = 11.84LPGMPINDD53 pKa = 5.27DD54 pKa = 4.27DD55 pKa = 6.83DD56 pKa = 6.08EE57 pKa = 7.89DD58 pKa = 6.83DD59 pKa = 6.52DD60 pKa = 7.49DD61 pKa = 7.58DD62 pKa = 7.68DD63 pKa = 7.69DD64 pKa = 7.71DD65 pKa = 7.63DD66 pKa = 7.61DD67 pKa = 7.17DD68 pKa = 5.09DD69 pKa = 4.23

Molecular weight: 7.37 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A367L3X8|A0A367L3X8_9HYPO Uncharacterized protein OS=Ophiocordyceps polyrhachis-furcata BCC 54312 OX=1330021 GN=L249_5021 PE=4 SV=1
MM1 pKa = 7.95PSPSLMRR8 pKa = 11.84SWMSGWKK15 pKa = 8.14TRR17 pKa = 11.84WNSMTSCLPSPRR29 pKa = 11.84RR30 pKa = 11.84SRR32 pKa = 11.84MRR34 pKa = 11.84PRR36 pKa = 11.84IQSPRR41 pKa = 11.84PMKK44 pKa = 10.17SRR46 pKa = 11.84RR47 pKa = 11.84RR48 pKa = 11.84QTSSS52 pKa = 2.45

Molecular weight: 6.24 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8807

1297

10104

4359552

31

4924

431.5

47.59

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.291 ± 0.024

1.368 ± 0.01

6.022 ± 0.022

5.711 ± 0.025

3.5 ± 0.015

7.069 ± 0.026

2.45 ± 0.011

4.058 ± 0.016

4.438 ± 0.021

9.136 ± 0.033

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.193 ± 0.009

3.121 ± 0.014

6.3 ± 0.028

3.879 ± 0.019

7.297 ± 0.024

8.379 ± 0.029

5.536 ± 0.017

6.355 ± 0.019

1.346 ± 0.009

2.546 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski