Capybara microvirus Cap1_SP_82

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.61

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4V1FVN2|A0A4V1FVN2_9VIRU Replication initiator protein OS=Capybara microvirus Cap1_SP_82 OX=2584793 PE=4 SV=1
MM1 pKa = 7.63SIFDD5 pKa = 3.3IHH7 pKa = 6.77KK8 pKa = 10.3LKK10 pKa = 10.98NSPTWSEE17 pKa = 3.75FDD19 pKa = 2.81ISQNKK24 pKa = 8.95KK25 pKa = 8.66FSSKK29 pKa = 9.82IGQILPVAYY38 pKa = 8.56RR39 pKa = 11.84TVLPGDD45 pKa = 3.84KK46 pKa = 10.56VNLPISHH53 pKa = 7.0FTQTLPLNKK62 pKa = 9.91NSFARR67 pKa = 11.84IRR69 pKa = 11.84EE70 pKa = 4.12HH71 pKa = 7.77VDD73 pKa = 2.86VFFVPFRR80 pKa = 11.84LLYY83 pKa = 10.87SKK85 pKa = 11.43ANDD88 pKa = 2.97ILVNNTDD95 pKa = 3.47SQVALANSATNNIIPTEE112 pKa = 4.11LPFTTISILNSAYY125 pKa = 9.78KK126 pKa = 10.29FYY128 pKa = 10.58KK129 pKa = 10.5AEE131 pKa = 4.09EE132 pKa = 4.24ASPSYY137 pKa = 9.68TFKK140 pKa = 11.01GHH142 pKa = 7.46DD143 pKa = 2.93IAGFSRR149 pKa = 11.84AEE151 pKa = 3.76NMKK154 pKa = 9.93YY155 pKa = 10.2LCEE158 pKa = 3.84LLGYY162 pKa = 10.95GDD164 pKa = 3.57ITRR167 pKa = 11.84GYY169 pKa = 9.73ADD171 pKa = 3.82SEE173 pKa = 4.54GSVDD177 pKa = 3.97NKK179 pKa = 10.96AHH181 pKa = 6.78IPLSMMPICAYY192 pKa = 10.1QKK194 pKa = 10.01IYY196 pKa = 11.32ADD198 pKa = 3.89FFRR201 pKa = 11.84YY202 pKa = 7.74QQWEE206 pKa = 4.21DD207 pKa = 3.62NNPYY211 pKa = 9.85TYY213 pKa = 11.33NFDD216 pKa = 3.57YY217 pKa = 10.87KK218 pKa = 10.38IASNGMQVSLQEE230 pKa = 3.51ITLPGFGANIYY241 pKa = 10.96GNGIFDD247 pKa = 5.2LRR249 pKa = 11.84YY250 pKa = 9.33KK251 pKa = 10.67NYY253 pKa = 10.71NKK255 pKa = 10.45DD256 pKa = 3.51YY257 pKa = 10.95YY258 pKa = 10.96FGLLPSQVNDD268 pKa = 2.81IYY270 pKa = 11.26LPKK273 pKa = 10.24FDD275 pKa = 4.31MTLDD279 pKa = 3.63TEE281 pKa = 4.32KK282 pKa = 10.45ATEE285 pKa = 3.98EE286 pKa = 4.09GHH288 pKa = 5.23FQRR291 pKa = 11.84FNDD294 pKa = 3.09ITTTLSVLQLRR305 pKa = 11.84ASYY308 pKa = 10.98ALQKK312 pKa = 10.01WSEE315 pKa = 3.96IQLFSDD321 pKa = 4.15KK322 pKa = 10.89NYY324 pKa = 9.84KK325 pKa = 10.44DD326 pKa = 3.66KK327 pKa = 10.93IKK329 pKa = 10.44HH330 pKa = 5.75HH331 pKa = 6.78FNVDD335 pKa = 3.34VPDD338 pKa = 3.68YY339 pKa = 9.47TANQAQYY346 pKa = 10.45LGGYY350 pKa = 8.77SSVMQINDD358 pKa = 3.17IVNTNLAQANAEE370 pKa = 3.98RR371 pKa = 11.84KK372 pKa = 10.18AIGNSANSGHH382 pKa = 6.89INFDD386 pKa = 3.9CKK388 pKa = 10.32EE389 pKa = 4.1HH390 pKa = 6.63GIIMAVYY397 pKa = 8.88YY398 pKa = 10.12ALPLMDD404 pKa = 4.71YY405 pKa = 8.07GTLYY409 pKa = 10.86GYY411 pKa = 10.57DD412 pKa = 3.6PEE414 pKa = 4.63VTHH417 pKa = 5.73VTADD421 pKa = 3.84DD422 pKa = 4.03FPKK425 pKa = 10.79PEE427 pKa = 4.29FDD429 pKa = 4.18NLGLSPVYY437 pKa = 10.2LHH439 pKa = 6.6NLIDD443 pKa = 4.46VPDD446 pKa = 4.36NLDD449 pKa = 3.38KK450 pKa = 11.08PIGYY454 pKa = 9.88APRR457 pKa = 11.84YY458 pKa = 8.49WDD460 pKa = 4.31FKK462 pKa = 10.29SCVDD466 pKa = 4.12KK467 pKa = 11.7YY468 pKa = 11.16CGAFNLEE475 pKa = 3.98QFRR478 pKa = 11.84GFTIEE483 pKa = 4.51HH484 pKa = 6.92PWNLLYY490 pKa = 10.68DD491 pKa = 4.01IALSEE496 pKa = 4.38HH497 pKa = 7.09PEE499 pKa = 4.32DD500 pKa = 5.39LPDD503 pKa = 4.15IYY505 pKa = 10.98WMALFKK511 pKa = 10.02CTPNDD516 pKa = 3.2AKK518 pKa = 10.91FIFSALPDD526 pKa = 3.75STRR529 pKa = 11.84LTDD532 pKa = 3.52TFLTSLDD539 pKa = 3.25FDD541 pKa = 4.57FKK543 pKa = 11.47VNRR546 pKa = 11.84CLSYY550 pKa = 11.35NGMPYY555 pKa = 10.91

Molecular weight: 63.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W404|A0A4P8W404_9VIRU Major capsid protein OS=Capybara microvirus Cap1_SP_82 OX=2584793 PE=3 SV=1
MM1 pKa = 7.78CIILNPKK8 pKa = 8.0TQLSEE13 pKa = 4.22HH14 pKa = 6.42FSLTEE19 pKa = 3.87MVSKK23 pKa = 10.85NDD25 pKa = 3.52PCHH28 pKa = 7.11DD29 pKa = 3.85VLLKK33 pKa = 10.44KK34 pKa = 10.78LPVHH38 pKa = 6.67VYY40 pKa = 9.73EE41 pKa = 4.49NLKK44 pKa = 10.1KK45 pKa = 10.06VCSILEE51 pKa = 4.18EE52 pKa = 3.9FRR54 pKa = 11.84KK55 pKa = 10.2ILDD58 pKa = 3.68CPISVNSALRR68 pKa = 11.84STSHH72 pKa = 6.65NIAVGGVTNSYY83 pKa = 9.25HH84 pKa = 5.65CHH86 pKa = 5.41GLAVDD91 pKa = 4.47FRR93 pKa = 11.84TNKK96 pKa = 8.68TALSNFQLLSSAYY109 pKa = 9.34NLKK112 pKa = 10.21PYY114 pKa = 10.58KK115 pKa = 10.29SGNYY119 pKa = 9.28LVAKK123 pKa = 9.91NDD125 pKa = 3.39KK126 pKa = 10.35FKK128 pKa = 11.37LLLYY132 pKa = 7.68PTFIHH137 pKa = 6.1MQLQKK142 pKa = 11.18

Molecular weight: 16.12 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1734

98

555

346.8

40.12

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.306 ± 0.595

1.557 ± 0.447

5.536 ± 0.855

5.421 ± 0.811

5.709 ± 1.133

3.922 ± 0.457

2.307 ± 0.636

6.171 ± 0.342

6.92 ± 0.508

10.092 ± 0.763

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.73 ± 0.228

8.939 ± 1.005

4.325 ± 0.732

5.306 ± 1.858

3.633 ± 0.482

6.69 ± 0.467

5.421 ± 0.154

4.268 ± 0.433

0.577 ± 0.213

6.171 ± 1.348
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski