Cow vetch latent virus alphasatellite

Taxonomy: Viruses; Alphasatellitidae; Nanoalphasatellitinae; Sophoyesatellite; Cow vetch latent alphasatellite

Average proteome isoelectric point is 7.02

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2H4T2E5|A0A2H4T2E5_9VIRU Replication initiator protein OS=Cow vetch latent virus alphasatellite OX=2056781 GN=Rep PE=4 SV=1
MM1 pKa = 7.53PSIRR5 pKa = 11.84GNMWAFTLNFIGPIPNLNWGPEE27 pKa = 3.77VQYY30 pKa = 11.4AKK32 pKa = 9.58WQHH35 pKa = 5.06EE36 pKa = 4.73KK37 pKa = 10.29KK38 pKa = 10.68AHH40 pKa = 6.13DD41 pKa = 4.0HH42 pKa = 5.64LQGFIQLKK50 pKa = 10.1EE51 pKa = 3.92RR52 pKa = 11.84MTLKK56 pKa = 10.42KK57 pKa = 9.92MKK59 pKa = 9.99ILIPGAHH66 pKa = 6.91LEE68 pKa = 4.26LCKK71 pKa = 10.56GTVEE75 pKa = 5.88DD76 pKa = 4.15NLNYY80 pKa = 9.86CGKK83 pKa = 10.1VEE85 pKa = 4.1TRR87 pKa = 11.84VTGPWEE93 pKa = 3.58YY94 pKa = 11.73GEE96 pKa = 3.92ILKK99 pKa = 10.73RR100 pKa = 11.84GSNKK104 pKa = 9.59RR105 pKa = 11.84KK106 pKa = 10.15VMDD109 pKa = 4.66RR110 pKa = 11.84YY111 pKa = 10.82EE112 pKa = 4.89DD113 pKa = 4.56DD114 pKa = 4.16PDD116 pKa = 3.79AMKK119 pKa = 10.34MEE121 pKa = 5.22DD122 pKa = 3.44PDD124 pKa = 5.02LYY126 pKa = 10.97LRR128 pKa = 11.84CNARR132 pKa = 11.84RR133 pKa = 11.84LEE135 pKa = 3.96KK136 pKa = 10.38EE137 pKa = 4.21YY138 pKa = 10.57MSSCGPATLSGWQIEE153 pKa = 4.15LHH155 pKa = 5.74EE156 pKa = 4.87ALMAEE161 pKa = 4.44PDD163 pKa = 3.84DD164 pKa = 3.95RR165 pKa = 11.84TIIWVYY171 pKa = 10.71GPVGGEE177 pKa = 4.17GKK179 pKa = 8.45STFAKK184 pKa = 10.37EE185 pKa = 3.95LIKK188 pKa = 10.68RR189 pKa = 11.84NYY191 pKa = 9.23FYY193 pKa = 11.4SPGGRR198 pKa = 11.84TEE200 pKa = 4.41NILYY204 pKa = 9.67LYY206 pKa = 11.35SMDD209 pKa = 3.94PEE211 pKa = 4.46RR212 pKa = 11.84NCVFDD217 pKa = 5.74FPRR220 pKa = 11.84CNKK223 pKa = 10.28DD224 pKa = 3.44FINYY228 pKa = 9.49SVIEE232 pKa = 4.19MIKK235 pKa = 10.5NGVFSSTKK243 pKa = 9.63YY244 pKa = 9.45RR245 pKa = 11.84PVDD248 pKa = 2.99IRR250 pKa = 11.84VIKK253 pKa = 9.2PRR255 pKa = 11.84HH256 pKa = 4.44VVIMCNEE263 pKa = 3.99LPDD266 pKa = 3.58VTKK269 pKa = 10.66ISEE272 pKa = 3.96DD273 pKa = 3.59RR274 pKa = 11.84IKK276 pKa = 10.47IIYY279 pKa = 8.96CC280 pKa = 3.79

Molecular weight: 32.6 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2H4T2E5|A0A2H4T2E5_9VIRU Replication initiator protein OS=Cow vetch latent virus alphasatellite OX=2056781 GN=Rep PE=4 SV=1
MM1 pKa = 7.53PSIRR5 pKa = 11.84GNMWAFTLNFIGPIPNLNWGPEE27 pKa = 3.77VQYY30 pKa = 11.4AKK32 pKa = 9.58WQHH35 pKa = 5.06EE36 pKa = 4.73KK37 pKa = 10.29KK38 pKa = 10.68AHH40 pKa = 6.13DD41 pKa = 4.0HH42 pKa = 5.64LQGFIQLKK50 pKa = 10.1EE51 pKa = 3.92RR52 pKa = 11.84MTLKK56 pKa = 10.42KK57 pKa = 9.92MKK59 pKa = 9.99ILIPGAHH66 pKa = 6.91LEE68 pKa = 4.26LCKK71 pKa = 10.56GTVEE75 pKa = 5.88DD76 pKa = 4.15NLNYY80 pKa = 9.86CGKK83 pKa = 10.1VEE85 pKa = 4.1TRR87 pKa = 11.84VTGPWEE93 pKa = 3.58YY94 pKa = 11.73GEE96 pKa = 3.92ILKK99 pKa = 10.73RR100 pKa = 11.84GSNKK104 pKa = 9.59RR105 pKa = 11.84KK106 pKa = 10.15VMDD109 pKa = 4.66RR110 pKa = 11.84YY111 pKa = 10.82EE112 pKa = 4.89DD113 pKa = 4.56DD114 pKa = 4.16PDD116 pKa = 3.79AMKK119 pKa = 10.34MEE121 pKa = 5.22DD122 pKa = 3.44PDD124 pKa = 5.02LYY126 pKa = 10.97LRR128 pKa = 11.84CNARR132 pKa = 11.84RR133 pKa = 11.84LEE135 pKa = 3.96KK136 pKa = 10.38EE137 pKa = 4.21YY138 pKa = 10.57MSSCGPATLSGWQIEE153 pKa = 4.15LHH155 pKa = 5.74EE156 pKa = 4.87ALMAEE161 pKa = 4.44PDD163 pKa = 3.84DD164 pKa = 3.95RR165 pKa = 11.84TIIWVYY171 pKa = 10.71GPVGGEE177 pKa = 4.17GKK179 pKa = 8.45STFAKK184 pKa = 10.37EE185 pKa = 3.95LIKK188 pKa = 10.68RR189 pKa = 11.84NYY191 pKa = 9.23FYY193 pKa = 11.4SPGGRR198 pKa = 11.84TEE200 pKa = 4.41NILYY204 pKa = 9.67LYY206 pKa = 11.35SMDD209 pKa = 3.94PEE211 pKa = 4.46RR212 pKa = 11.84NCVFDD217 pKa = 5.74FPRR220 pKa = 11.84CNKK223 pKa = 10.28DD224 pKa = 3.44FINYY228 pKa = 9.49SVIEE232 pKa = 4.19MIKK235 pKa = 10.5NGVFSSTKK243 pKa = 9.63YY244 pKa = 9.45RR245 pKa = 11.84PVDD248 pKa = 2.99IRR250 pKa = 11.84VIKK253 pKa = 9.2PRR255 pKa = 11.84HH256 pKa = 4.44VVIMCNEE263 pKa = 3.99LPDD266 pKa = 3.58VTKK269 pKa = 10.66ISEE272 pKa = 3.96DD273 pKa = 3.59RR274 pKa = 11.84IKK276 pKa = 10.47IIYY279 pKa = 8.96CC280 pKa = 3.79

Molecular weight: 32.6 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

280

280

280

280.0

32.6

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.571 ± 0.0

2.857 ± 0.0

5.714 ± 0.0

7.857 ± 0.0

3.214 ± 0.0

6.786 ± 0.0

2.143 ± 0.0

7.857 ± 0.0

8.214 ± 0.0

7.143 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

4.286 ± 0.0

5.357 ± 0.0

6.071 ± 0.0

1.786 ± 0.0

6.429 ± 0.0

4.286 ± 0.0

3.929 ± 0.0

5.357 ± 0.0

2.143 ± 0.0

5.0 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski