Nonomuraea maritima

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Streptosporangiales; Streptosporangiaceae; Nonomuraea

Average proteome isoelectric point is 6.48

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7903 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1G9NBA0|A0A1G9NBA0_9ACTN 1 4-dihydroxy-2-naphthoyl-CoA synthase OS=Nonomuraea maritima OX=683260 GN=menB PE=3 SV=1
MM1 pKa = 7.8TDD3 pKa = 3.0NDD5 pKa = 4.17LTFGDD10 pKa = 4.67EE11 pKa = 4.68DD12 pKa = 4.4YY13 pKa = 11.19EE14 pKa = 4.67LPDD17 pKa = 3.25VEE19 pKa = 5.9RR20 pKa = 11.84RR21 pKa = 11.84ICPSCGTNSRR31 pKa = 11.84IITRR35 pKa = 11.84GDD37 pKa = 2.95SRR39 pKa = 11.84ATIVSKK45 pKa = 10.93CCEE48 pKa = 4.05APLSGTADD56 pKa = 3.79DD57 pKa = 5.22QDD59 pKa = 4.6DD60 pKa = 4.27EE61 pKa = 4.64PAVLVLDD68 pKa = 4.79GKK70 pKa = 9.44LVCPYY75 pKa = 10.08ADD77 pKa = 4.02CSATDD82 pKa = 4.16EE83 pKa = 4.33IVEE86 pKa = 4.32LDD88 pKa = 3.31VATRR92 pKa = 11.84SNEE95 pKa = 3.67LTIIRR100 pKa = 11.84PGVISVALGDD110 pKa = 3.88SCFEE114 pKa = 4.07NDD116 pKa = 4.06GFEE119 pKa = 4.8CEE121 pKa = 3.99QCSRR125 pKa = 11.84RR126 pKa = 11.84VSLPDD131 pKa = 3.82GYY133 pKa = 10.96EE134 pKa = 3.44LSYY137 pKa = 10.91PP138 pKa = 3.76

Molecular weight: 15.01 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1G8UDI3|A0A1G8UDI3_9ACTN Bifunctional protein GlmU OS=Nonomuraea maritima OX=683260 GN=glmU PE=3 SV=1
MM1 pKa = 6.33QWRR4 pKa = 11.84RR5 pKa = 11.84SGYY8 pKa = 8.05TSSLRR13 pKa = 11.84SSASRR18 pKa = 11.84ARR20 pKa = 11.84SSWPSSRR27 pKa = 11.84RR28 pKa = 11.84WGSSSVRR35 pKa = 11.84RR36 pKa = 11.84PRR38 pKa = 11.84PSRR41 pKa = 11.84RR42 pKa = 11.84RR43 pKa = 11.84WSAGSPKK50 pKa = 9.85LWAPRR55 pKa = 11.84RR56 pKa = 11.84VALPGAAVSRR66 pKa = 11.84PTSRR70 pKa = 11.84SRR72 pKa = 11.84QGLRR76 pKa = 11.84PGRR79 pKa = 11.84AMARR83 pKa = 11.84PATARR88 pKa = 11.84RR89 pKa = 11.84RR90 pKa = 11.84RR91 pKa = 11.84FPLRR95 pKa = 11.84VRR97 pKa = 11.84APVPVRR103 pKa = 11.84VPAPQALRR111 pKa = 11.84APQAARR117 pKa = 11.84SRR119 pKa = 11.84VRR121 pKa = 11.84RR122 pKa = 11.84FRR124 pKa = 11.84CPTSRR129 pKa = 11.84SSSPRR134 pKa = 11.84PRR136 pKa = 11.84AVRR139 pKa = 11.84PPGLRR144 pKa = 11.84RR145 pKa = 11.84RR146 pKa = 11.84ASTVARR152 pKa = 11.84PLVRR156 pKa = 11.84LRR158 pKa = 11.84ARR160 pKa = 11.84VPAPPPVPARR170 pKa = 11.84SPALGPVRR178 pKa = 11.84VLVVAVAVAVPRR190 pKa = 11.84RR191 pKa = 11.84RR192 pKa = 11.84RR193 pKa = 11.84VPARR197 pKa = 11.84LPVAPLVPARR207 pKa = 11.84APSPARR213 pKa = 11.84VVRR216 pKa = 11.84VPATTRR222 pKa = 11.84SRR224 pKa = 11.84PTRR227 pKa = 11.84AAWVSRR233 pKa = 11.84VRR235 pKa = 11.84RR236 pKa = 11.84VPVATAKK243 pKa = 10.54AAAPASASVVTVRR256 pKa = 11.84RR257 pKa = 11.84ATARR261 pKa = 11.84CRR263 pKa = 11.84VRR265 pKa = 11.84RR266 pKa = 11.84RR267 pKa = 11.84AVPAPTPGPAPAARR281 pKa = 11.84VPARR285 pKa = 11.84RR286 pKa = 11.84PAVRR290 pKa = 11.84VRR292 pKa = 11.84VPVRR296 pKa = 11.84VVRR299 pKa = 11.84VRR301 pKa = 11.84VARR304 pKa = 11.84VPTRR308 pKa = 3.2

Molecular weight: 33.83 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7903

0

7903

2450462

26

3110

310.1

33.34

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.225 ± 0.04

0.78 ± 0.009

5.887 ± 0.022

5.683 ± 0.025

2.8 ± 0.015

9.189 ± 0.028

2.272 ± 0.011

3.426 ± 0.018

2.018 ± 0.019

10.591 ± 0.038

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.935 ± 0.012

1.722 ± 0.013

6.042 ± 0.026

2.7 ± 0.016

8.302 ± 0.03

4.954 ± 0.02

5.806 ± 0.021

9.015 ± 0.027

1.548 ± 0.011

2.106 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski