Enterobacter phage Arya

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Jilinvirus; unclassified Jilinvirus

Average proteome isoelectric point is 6.36

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 61 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A193GYD1|A0A193GYD1_9CAUD Putative tail protein OS=Enterobacter phage Arya OX=1864622 GN=BI096_gp14 PE=4 SV=1
MM1 pKa = 7.72AAQTYY6 pKa = 6.7VTSDD10 pKa = 3.37GDD12 pKa = 3.81TADD15 pKa = 3.97YY16 pKa = 10.59IAWKK20 pKa = 10.49YY21 pKa = 10.78YY22 pKa = 10.19GNQDD26 pKa = 3.55PGTVEE31 pKa = 4.29ALVDD35 pKa = 4.08ANKK38 pKa = 10.57GLADD42 pKa = 4.43IGPLLPAGMVITLPEE57 pKa = 4.02ISTPATQQGIKK68 pKa = 10.22LWDD71 pKa = 3.31

Molecular weight: 7.54 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A193GYR8|A0A193GYR8_9CAUD Uncharacterized protein OS=Enterobacter phage Arya OX=1864622 GN=BI096_gp44 PE=4 SV=1
MM1 pKa = 6.53TTFAINFIAVCFIFIWASWCVMYY24 pKa = 10.88SGVKK28 pKa = 10.28DD29 pKa = 4.12GIVGKK34 pKa = 10.49LFFSLVAISALAIIIHH50 pKa = 6.26TLTGHH55 pKa = 4.97YY56 pKa = 10.13AKK58 pKa = 10.59RR59 pKa = 11.84PFITMNVSIALVGARR74 pKa = 11.84HH75 pKa = 6.12VFLSWLKK82 pKa = 10.34RR83 pKa = 11.84FKK85 pKa = 10.54AAQQRR90 pKa = 11.84HH91 pKa = 5.13HH92 pKa = 6.44SS93 pKa = 3.77

Molecular weight: 10.49 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

61

0

61

12980

27

813

212.8

23.26

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.048 ± 0.373

1.133 ± 0.141

6.333 ± 0.265

5.77 ± 0.372

3.451 ± 0.23

8.544 ± 0.433

1.579 ± 0.152

5.27 ± 0.209

4.954 ± 0.335

7.612 ± 0.232

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.427 ± 0.173

4.445 ± 0.222

4.561 ± 0.25

4.099 ± 0.248

5.763 ± 0.36

5.524 ± 0.279

6.425 ± 0.445

6.672 ± 0.323

1.81 ± 0.166

2.581 ± 0.167
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski