Cetacean poxvirus 1

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus; unclassified Orthopoxvirus

Average proteome isoelectric point is 6.73

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 115 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6B9R4L0|A0A6B9R4L0_9POXV DNA topoisomerase I OS=Cetacean poxvirus 1 OX=319748 PE=3 SV=1
MM1 pKa = 7.3GVNHH5 pKa = 6.66EE6 pKa = 4.85LDD8 pKa = 3.78VIINNVTFKK17 pKa = 11.14NVGLIKK23 pKa = 10.38GDD25 pKa = 3.45SYY27 pKa = 11.75GCHH30 pKa = 6.8IDD32 pKa = 5.78LISTDD37 pKa = 2.72IDD39 pKa = 4.16YY40 pKa = 10.69IVCLTVILRR49 pKa = 11.84PDD51 pKa = 4.33WINVNKK57 pKa = 10.01VKK59 pKa = 10.62HH60 pKa = 5.92IRR62 pKa = 11.84LKK64 pKa = 9.29VNSYY68 pKa = 9.06EE69 pKa = 4.79LEE71 pKa = 4.23LNVKK75 pKa = 10.2KK76 pKa = 9.21EE77 pKa = 4.33TNEE80 pKa = 3.68EE81 pKa = 4.48VIWEE85 pKa = 4.14TDD87 pKa = 3.77FVGHH91 pKa = 6.57NVTTLKK97 pKa = 10.85LYY99 pKa = 10.22TDD101 pKa = 4.22EE102 pKa = 4.91NDD104 pKa = 3.11EE105 pKa = 4.17SKK107 pKa = 11.44YY108 pKa = 10.63PVLQYY113 pKa = 10.14NTFRR117 pKa = 11.84RR118 pKa = 11.84HH119 pKa = 4.63AAVMYY124 pKa = 9.83EE125 pKa = 4.16GYY127 pKa = 9.26TYY129 pKa = 9.89GICIKK134 pKa = 10.67YY135 pKa = 10.25DD136 pKa = 3.44DD137 pKa = 5.2NYY139 pKa = 11.17DD140 pKa = 4.16DD141 pKa = 6.03NYY143 pKa = 11.65DD144 pKa = 5.34DD145 pKa = 6.73DD146 pKa = 7.31DD147 pKa = 7.56DD148 pKa = 7.6DD149 pKa = 7.66DD150 pKa = 7.53DD151 pKa = 7.65DD152 pKa = 7.65DD153 pKa = 7.65DD154 pKa = 7.65DD155 pKa = 7.65DD156 pKa = 7.58DD157 pKa = 7.56DD158 pKa = 7.49DD159 pKa = 7.11DD160 pKa = 7.31DD161 pKa = 5.13DD162 pKa = 6.35VIVIDD167 pKa = 4.08

Molecular weight: 19.49 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6B9R5X2|A0A6B9R5X2_9POXV EEv membrane phosphoglycoprotein OS=Cetacean poxvirus 1 OX=319748 PE=4 SV=1
MM1 pKa = 7.07YY2 pKa = 9.06WYY4 pKa = 10.78SNYY7 pKa = 10.54NIVLTPPRR15 pKa = 11.84RR16 pKa = 11.84CTKK19 pKa = 10.36CAANLTAMLIEE30 pKa = 4.82DD31 pKa = 4.08KK32 pKa = 11.45QNIKK36 pKa = 10.57YY37 pKa = 10.59LLYY40 pKa = 10.6SQPNKK45 pKa = 10.59LKK47 pKa = 10.94LILDD51 pKa = 4.51FLTVSRR57 pKa = 11.84NKK59 pKa = 10.5SFNLKK64 pKa = 10.0ILDD67 pKa = 3.72KK68 pKa = 10.86EE69 pKa = 4.39IIRR72 pKa = 11.84VLTT75 pKa = 3.69

Molecular weight: 8.9 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

115

0

115

36852

54

1288

320.5

37.09

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

2.909 ± 0.126

2.42 ± 0.133

5.894 ± 0.142

5.397 ± 0.156

4.827 ± 0.136

3.275 ± 0.141

2.019 ± 0.084

10.827 ± 0.189

8.171 ± 0.145

9.37 ± 0.191

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.41 ± 0.087

8.13 ± 0.176

2.781 ± 0.112

2.385 ± 0.088

3.468 ± 0.12

7.956 ± 0.147

5.785 ± 0.143

5.886 ± 0.112

0.559 ± 0.037

5.53 ± 0.163
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski