Penicillium nalgiovense

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomy

Average proteome isoelectric point is 6.4

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 11728 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1V6Y7V5|A0A1V6Y7V5_PENNA Uncharacterized protein OS=Penicillium nalgiovense OX=60175 GN=PENNAL_c0032G03885 PE=4 SV=1
MM1 pKa = 7.72RR2 pKa = 11.84TQQLLPLYY10 pKa = 9.5GLLLASVAIASKK22 pKa = 10.51LDD24 pKa = 3.57HH25 pKa = 7.65DD26 pKa = 5.06DD27 pKa = 3.5VPNRR31 pKa = 11.84CWPACGPVVGIANSCDD47 pKa = 3.12ARR49 pKa = 11.84HH50 pKa = 5.93EE51 pKa = 4.21RR52 pKa = 11.84DD53 pKa = 3.38SAEE56 pKa = 3.95IRR58 pKa = 11.84CICDD62 pKa = 2.59WDD64 pKa = 3.79AAKK67 pKa = 8.95TQIPLCAACITQYY80 pKa = 9.22QTDD83 pKa = 3.72RR84 pKa = 11.84RR85 pKa = 11.84NHH87 pKa = 6.42KK88 pKa = 9.54IAHH91 pKa = 6.95HH92 pKa = 6.63DD93 pKa = 3.77HH94 pKa = 7.2DD95 pKa = 5.99HH96 pKa = 7.99DD97 pKa = 7.1DD98 pKa = 4.81DD99 pKa = 6.82DD100 pKa = 7.46DD101 pKa = 6.34YY102 pKa = 12.12DD103 pKa = 6.5DD104 pKa = 6.87DD105 pKa = 7.28DD106 pKa = 7.11DD107 pKa = 7.43DD108 pKa = 5.27YY109 pKa = 12.12DD110 pKa = 4.11NDD112 pKa = 4.51NDD114 pKa = 5.48IDD116 pKa = 5.15DD117 pKa = 5.56DD118 pKa = 4.89DD119 pKa = 6.11NEE121 pKa = 4.39ALDD124 pKa = 4.22LVRR127 pKa = 11.84SCTLTTTTYY136 pKa = 10.98NSAAATTASTSTSTAGANTATTTDD160 pKa = 3.19SSNAATGTDD169 pKa = 3.38SAGTGGTNSQDD180 pKa = 3.46STDD183 pKa = 3.73SAEE186 pKa = 4.48SAGSASSPTPTPDD199 pKa = 2.9AAAGILAPGAVSMAGVMGLVALAWLL224 pKa = 4.2

Molecular weight: 23.36 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1V6YNW7|A0A1V6YNW7_PENNA Uncharacterized protein OS=Penicillium nalgiovense OX=60175 GN=PENNAL_c0015G01031 PE=4 SV=1
MM1 pKa = 7.87PSHH4 pKa = 5.85KK5 pKa = 9.4TFRR8 pKa = 11.84TKK10 pKa = 10.46QKK12 pKa = 9.65LAKK15 pKa = 9.74AQRR18 pKa = 11.84QNRR21 pKa = 11.84PIPQWIRR28 pKa = 11.84LRR30 pKa = 11.84TNNTIRR36 pKa = 11.84YY37 pKa = 5.73NAKK40 pKa = 8.78RR41 pKa = 11.84RR42 pKa = 11.84HH43 pKa = 4.52WRR45 pKa = 11.84KK46 pKa = 8.43STLKK50 pKa = 10.46VV51 pKa = 3.09

Molecular weight: 6.34 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

11728

0

11728

5354899

8

7269

456.6

50.59

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.372 ± 0.019

1.26 ± 0.009

5.693 ± 0.016

6.145 ± 0.021

3.756 ± 0.014

6.71 ± 0.019

2.463 ± 0.011

5.021 ± 0.017

4.644 ± 0.017

8.929 ± 0.025

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.257 ± 0.008

3.744 ± 0.01

6.114 ± 0.021

4.091 ± 0.016

6.058 ± 0.019

8.405 ± 0.025

5.995 ± 0.017

6.107 ± 0.017

1.466 ± 0.008

2.766 ± 0.01
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski