Salinibacter phage M8CC-19

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kryptosalinivirus; Salinibacter virus M8CC19

Average proteome isoelectric point is 5.69

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 75 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2I6UG82|A0A2I6UG82_9CAUD Uncharacterized protein OS=Salinibacter phage M8CC-19 OX=2681613 PE=4 SV=1
MM1 pKa = 7.48IKK3 pKa = 10.41LFEE6 pKa = 4.56FLPEE10 pKa = 4.25DD11 pKa = 4.32YY12 pKa = 10.37EE13 pKa = 4.4WVDD16 pKa = 3.13APLYY20 pKa = 10.43VEE22 pKa = 5.42AGFTLHH28 pKa = 6.87EE29 pKa = 4.47GRR31 pKa = 11.84PARR34 pKa = 11.84MNYY37 pKa = 10.09GGLPDD42 pKa = 4.12PAEE45 pKa = 4.14PATYY49 pKa = 9.98EE50 pKa = 3.89VDD52 pKa = 3.2EE53 pKa = 4.5LRR55 pKa = 11.84IEE57 pKa = 4.37EE58 pKa = 4.43GPKK61 pKa = 10.35LSEE64 pKa = 4.19AVDD67 pKa = 3.87DD68 pKa = 4.04EE69 pKa = 4.58TFEE72 pKa = 4.22NVLDD76 pKa = 4.47VIYY79 pKa = 7.15EE80 pKa = 4.38TPVHH84 pKa = 6.3EE85 pKa = 4.26VAEE88 pKa = 4.5MYY90 pKa = 10.65VRR92 pKa = 4.25

Molecular weight: 10.61 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2I6UG90|A0A2I6UG90_9CAUD Uncharacterized protein OS=Salinibacter phage M8CC-19 OX=2681613 PE=4 SV=1
MM1 pKa = 8.03PILPPSTGRR10 pKa = 11.84TPEE13 pKa = 4.14DD14 pKa = 3.14KK15 pKa = 10.78KK16 pKa = 10.55QLRR19 pKa = 11.84DD20 pKa = 3.63LLSWSARR27 pKa = 11.84HH28 pKa = 6.0GFGPKK33 pKa = 10.29FGTTTVSHH41 pKa = 5.71YY42 pKa = 11.11QNTHH46 pKa = 4.37FTRR49 pKa = 11.84LKK51 pKa = 10.84GLGALIGIYY60 pKa = 10.24DD61 pKa = 4.2PSRR64 pKa = 11.84SRR66 pKa = 11.84WTGRR70 pKa = 11.84NAEE73 pKa = 3.9VRR75 pKa = 11.84VRR77 pKa = 11.84DD78 pKa = 3.65GEE80 pKa = 3.85IQYY83 pKa = 11.28RR84 pKa = 11.84LFSPKK89 pKa = 9.81GDD91 pKa = 3.47APEE94 pKa = 5.06KK95 pKa = 7.91FTRR98 pKa = 11.84WNVAANAEE106 pKa = 4.09KK107 pKa = 9.99FARR110 pKa = 11.84FGRR113 pKa = 11.84RR114 pKa = 11.84SVRR117 pKa = 11.84YY118 pKa = 8.95

Molecular weight: 13.54 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

75

0

75

15665

31

2773

208.9

23.53

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.494 ± 0.405

0.44 ± 0.083

7.514 ± 0.281

8.171 ± 0.484

4.264 ± 0.26

7.603 ± 0.589

1.934 ± 0.22

5.062 ± 0.226

4.89 ± 0.316

7.124 ± 0.28

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.368 ± 0.306

4.832 ± 0.431

4.124 ± 0.249

3.205 ± 0.275

6.613 ± 0.417

5.956 ± 0.514

6.122 ± 0.325

7.105 ± 0.282

1.366 ± 0.12

3.811 ± 0.206
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski