Tortoise microvirus 29

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 7.46

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W5T7|A0A4P8W5T7_9VIRU Replication initiation protein OS=Tortoise microvirus 29 OX=2583131 PE=4 SV=1
MM1 pKa = 6.85QKK3 pKa = 10.18KK4 pKa = 9.5VKK6 pKa = 10.39NVEE9 pKa = 3.88QSSAPTVFVRR19 pKa = 11.84KK20 pKa = 9.25QLNYY24 pKa = 10.9NLGDD28 pKa = 3.98YY29 pKa = 9.39ITDD32 pKa = 4.2FDD34 pKa = 3.94QSSGKK39 pKa = 10.2SEE41 pKa = 4.11TTPDD45 pKa = 3.29QAKK48 pKa = 8.68TPSEE52 pKa = 4.06LVKK55 pKa = 10.53LYY57 pKa = 10.7YY58 pKa = 10.47SGMSFAGGQTPQYY71 pKa = 10.42SEE73 pKa = 5.76LEE75 pKa = 4.06IPDD78 pKa = 4.46LKK80 pKa = 11.4KK81 pKa = 9.81MDD83 pKa = 4.11LVEE86 pKa = 3.83VDD88 pKa = 3.36QYY90 pKa = 11.45RR91 pKa = 11.84EE92 pKa = 3.74KK93 pKa = 10.91LLKK96 pKa = 9.67QRR98 pKa = 11.84RR99 pKa = 11.84EE100 pKa = 3.9TEE102 pKa = 3.63EE103 pKa = 3.69ALRR106 pKa = 11.84IASQEE111 pKa = 3.8QAKK114 pKa = 10.52KK115 pKa = 10.46YY116 pKa = 10.2DD117 pKa = 3.63EE118 pKa = 4.17EE119 pKa = 4.32RR120 pKa = 11.84QRR122 pKa = 11.84QALEE126 pKa = 3.91IIEE129 pKa = 4.53EE130 pKa = 4.09IKK132 pKa = 10.71KK133 pKa = 10.6RR134 pKa = 11.84SSTQNNNNQNDD145 pKa = 3.97PQTT148 pKa = 3.57

Molecular weight: 17.17 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4V1FVX6|A0A4V1FVX6_9VIRU Major capsid protein OS=Tortoise microvirus 29 OX=2583131 PE=3 SV=1
MM1 pKa = 7.27LQLSSRR7 pKa = 11.84KK8 pKa = 9.28FFFPYY13 pKa = 10.15SPVRR17 pKa = 11.84PLVVSLMQRR26 pKa = 11.84GTNEE30 pKa = 3.51ADD32 pKa = 3.53SPRR35 pKa = 11.84MQGRR39 pKa = 11.84SGTEE43 pKa = 2.82VDD45 pKa = 3.52AANEE49 pKa = 3.89RR50 pKa = 11.84SEE52 pKa = 5.49DD53 pKa = 3.81KK54 pKa = 11.3VSTTARR60 pKa = 11.84KK61 pKa = 8.31PAAGDD66 pKa = 3.56GNPKK70 pKa = 10.1VSTLYY75 pKa = 10.09TT76 pKa = 3.47

Molecular weight: 8.33 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1313

76

496

262.6

29.97

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.626 ± 0.618

0.838 ± 0.497

5.331 ± 0.441

6.245 ± 0.935

4.113 ± 0.768

6.169 ± 0.889

2.056 ± 0.722

3.96 ± 0.42

7.159 ± 1.554

7.54 ± 0.905

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.123 ± 0.327

5.788 ± 0.614

5.179 ± 0.751

5.788 ± 1.218

5.712 ± 0.381

7.616 ± 0.473

5.255 ± 0.324

5.255 ± 0.941

1.219 ± 0.305

5.027 ± 0.234
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski