Carlito syrichta (Philippine tarsier) (Tarsius syrichta)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates;

Average proteome isoelectric point is 6.69

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 30311 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1U7SS96|A0A1U7SS96_CARSF fibrillin-3 OS=Carlito syrichta OX=1868482 GN=FBN3 PE=3 SV=1
MM1 pKa = 7.91VDD3 pKa = 3.64EE4 pKa = 5.31LVLLLRR10 pKa = 11.84ALLVRR15 pKa = 11.84HH16 pKa = 5.78RR17 pKa = 11.84VLSIEE22 pKa = 4.05NGRR25 pKa = 11.84LMEE28 pKa = 3.95QLRR31 pKa = 11.84LLVCEE36 pKa = 4.1RR37 pKa = 11.84ASLLRR42 pKa = 11.84QVRR45 pKa = 11.84PPNCPVPFPEE55 pKa = 4.32TFNGEE60 pKa = 4.23SARR63 pKa = 11.84LPEE66 pKa = 4.51FVVQTASYY74 pKa = 9.84MLVNEE79 pKa = 4.62NRR81 pKa = 11.84FCNDD85 pKa = 2.31AMKK88 pKa = 10.62VAFLISLLTGDD99 pKa = 3.42AQEE102 pKa = 4.26WVLSYY107 pKa = 11.44LEE109 pKa = 4.2TDD111 pKa = 3.61SPILLDD117 pKa = 3.48YY118 pKa = 10.87RR119 pKa = 11.84AFLDD123 pKa = 3.35EE124 pKa = 4.41MKK126 pKa = 10.51RR127 pKa = 11.84CFGWEE132 pKa = 4.0EE133 pKa = 4.5SDD135 pKa = 6.32DD136 pKa = 5.87DD137 pKa = 6.64DD138 pKa = 7.76DD139 pKa = 7.65DD140 pKa = 7.63DD141 pKa = 7.4DD142 pKa = 6.86DD143 pKa = 6.79DD144 pKa = 6.17YY145 pKa = 12.09YY146 pKa = 11.73DD147 pKa = 5.55DD148 pKa = 6.26GDD150 pKa = 4.82DD151 pKa = 4.0GDD153 pKa = 4.02YY154 pKa = 11.74GEE156 pKa = 5.67DD157 pKa = 3.92GDD159 pKa = 4.88YY160 pKa = 11.45GDD162 pKa = 5.65DD163 pKa = 4.4GDD165 pKa = 4.53YY166 pKa = 11.45GDD168 pKa = 5.07DD169 pKa = 4.31GEE171 pKa = 4.42YY172 pKa = 10.67SDD174 pKa = 5.48YY175 pKa = 11.44EE176 pKa = 4.4VIEE179 pKa = 4.29YY180 pKa = 10.67

Molecular weight: 20.75 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3Q0DU48|A0A3Q0DU48_CARSF Plasma retinol-binding protein OS=Carlito syrichta OX=1868482 GN=RBP4 PE=3 SV=1
MM1 pKa = 7.67AAQSAPKK8 pKa = 10.16VVLKK12 pKa = 10.04STTKK16 pKa = 9.35MSLNEE21 pKa = 4.25RR22 pKa = 11.84FTNMLKK28 pKa = 10.36NKK30 pKa = 9.73QPMPVNIRR38 pKa = 11.84ASMQQQQQLASARR51 pKa = 11.84NRR53 pKa = 11.84RR54 pKa = 11.84LAQQMEE60 pKa = 4.32NRR62 pKa = 11.84PSVQAALKK70 pKa = 10.37LKK72 pKa = 10.39QKK74 pKa = 9.42SLKK77 pKa = 9.72QRR79 pKa = 11.84LGKK82 pKa = 10.77SNIQARR88 pKa = 11.84LGRR91 pKa = 11.84PIGTLARR98 pKa = 11.84GAIGGRR104 pKa = 11.84GLPIIQRR111 pKa = 11.84GLPRR115 pKa = 11.84GGLRR119 pKa = 11.84GGRR122 pKa = 11.84ATRR125 pKa = 11.84TLLRR129 pKa = 11.84GGMSLRR135 pKa = 11.84GQNLLRR141 pKa = 11.84GGRR144 pKa = 11.84AVAPRR149 pKa = 11.84MGLRR153 pKa = 11.84RR154 pKa = 11.84GGVRR158 pKa = 11.84GRR160 pKa = 11.84GGPGRR165 pKa = 11.84GGLGRR170 pKa = 11.84GAMGRR175 pKa = 11.84GGIGGRR181 pKa = 11.84GG182 pKa = 3.12

Molecular weight: 19.35 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

19956

10355

30311

16244683

31

34350

535.9

59.83

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.736 ± 0.014

2.18 ± 0.012

4.878 ± 0.01

7.193 ± 0.021

3.673 ± 0.011

6.371 ± 0.019

2.606 ± 0.009

4.478 ± 0.015

5.954 ± 0.02

9.838 ± 0.026

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.222 ± 0.008

3.683 ± 0.01

6.089 ± 0.022

4.785 ± 0.016

5.604 ± 0.013

8.364 ± 0.021

5.367 ± 0.015

6.078 ± 0.016

1.183 ± 0.005

2.677 ± 0.008
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski