Streptococcus satellite phage Javan410

Taxonomy: Viruses; unclassified bacterial viruses

Average proteome isoelectric point is 6.21

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 23 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZPB0|A0A4D5ZPB0_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan410 OX=2558687 GN=JavanS410_0006 PE=4 SV=1
MM1 pKa = 7.6KK2 pKa = 10.4NLEE5 pKa = 4.17EE6 pKa = 5.44KK7 pKa = 10.32IEE9 pKa = 4.01PVVIILDD16 pKa = 3.82EE17 pKa = 4.39EE18 pKa = 4.81DD19 pKa = 5.15DD20 pKa = 4.17FDD22 pKa = 6.03FEE24 pKa = 4.36EE25 pKa = 4.73TDD27 pKa = 5.58DD28 pKa = 4.88EE29 pKa = 4.43IQAQYY34 pKa = 10.81EE35 pKa = 4.17ADD37 pKa = 3.88CLEE40 pKa = 5.86DD41 pKa = 3.66DD42 pKa = 4.18TQDD45 pKa = 3.43VINWINEE52 pKa = 4.11SNTLAEE58 pKa = 4.29YY59 pKa = 11.21VSMEE63 pKa = 4.42FEE65 pKa = 5.29NMNQDD70 pKa = 3.68DD71 pKa = 4.68LGASLEE77 pKa = 4.2NASQCLDD84 pKa = 4.31AIVGMLEE91 pKa = 3.76NGTLVLAGGKK101 pKa = 9.33HH102 pKa = 5.1EE103 pKa = 4.14NN104 pKa = 3.61

Molecular weight: 11.73 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZMG2|A0A4D5ZMG2_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan410 OX=2558687 GN=JavanS410_0010 PE=4 SV=1
MM1 pKa = 7.92KK2 pKa = 9.25ITEE5 pKa = 4.15YY6 pKa = 10.63KK7 pKa = 9.64KK8 pKa = 10.76KK9 pKa = 10.68NGATVYY15 pKa = 10.31RR16 pKa = 11.84SQVYY20 pKa = 10.38LGIDD24 pKa = 3.31VVTGKK29 pKa = 10.22KK30 pKa = 10.34VKK32 pKa = 9.5TSVSARR38 pKa = 11.84TKK40 pKa = 10.94KK41 pKa = 9.63EE42 pKa = 3.83VKK44 pKa = 10.37LLATQKK50 pKa = 10.89KK51 pKa = 10.17YY52 pKa = 11.07DD53 pKa = 3.74FKK55 pKa = 11.52QNGSTIYY62 pKa = 10.47KK63 pKa = 9.67SVNIDD68 pKa = 3.32TFDD71 pKa = 3.56EE72 pKa = 4.42LTEE75 pKa = 4.2LWLEE79 pKa = 4.32SYY81 pKa = 10.87KK82 pKa = 10.45LTVKK86 pKa = 9.78PQSYY90 pKa = 10.65KK91 pKa = 9.82NTISKK96 pKa = 9.52IDD98 pKa = 3.53CHH100 pKa = 5.91IRR102 pKa = 11.84PYY104 pKa = 9.88FGHH107 pKa = 6.21MKK109 pKa = 10.09LNKK112 pKa = 9.3INASMIQVFINDD124 pKa = 3.87LSKK127 pKa = 11.14KK128 pKa = 9.2QDD130 pKa = 3.47SFVMIRR136 pKa = 11.84SIISRR141 pKa = 11.84ILQQGVLLNLIPSNPARR158 pKa = 11.84DD159 pKa = 3.46IILPRR164 pKa = 11.84KK165 pKa = 8.3KK166 pKa = 9.98HH167 pKa = 5.86KK168 pKa = 10.71DD169 pKa = 3.26NNKK172 pKa = 9.52VKK174 pKa = 10.68FIDD177 pKa = 4.47KK178 pKa = 10.57EE179 pKa = 4.14DD180 pKa = 3.45LKK182 pKa = 11.32KK183 pKa = 10.83FLDD186 pKa = 4.5HH187 pKa = 7.13IEE189 pKa = 4.09KK190 pKa = 10.39KK191 pKa = 10.56SYY193 pKa = 10.14GRR195 pKa = 11.84YY196 pKa = 9.64GLYY199 pKa = 10.09FDD201 pKa = 4.29YY202 pKa = 11.22VLYY205 pKa = 11.02NLLLATGLRR214 pKa = 11.84VGEE217 pKa = 4.2ACALEE222 pKa = 4.28WSDD225 pKa = 4.33IDD227 pKa = 4.56LEE229 pKa = 4.33NGIITVTKK237 pKa = 9.74TYY239 pKa = 10.89NKK241 pKa = 9.33SLKK244 pKa = 10.16IISTTKK250 pKa = 9.0TKK252 pKa = 10.6AGNRR256 pKa = 11.84IISIGKK262 pKa = 8.46DD263 pKa = 3.1TVNLMKK269 pKa = 10.41LYY271 pKa = 10.44KK272 pKa = 10.15ARR274 pKa = 11.84QRR276 pKa = 11.84QLFSEE281 pKa = 4.77LGSNSPRR288 pKa = 11.84IVFSTPTKK296 pKa = 10.32EE297 pKa = 4.24YY298 pKa = 9.99FDD300 pKa = 3.65NATRR304 pKa = 11.84QCALDD309 pKa = 3.98TMCGQAGVPRR319 pKa = 11.84FTFHH323 pKa = 7.91AFRR326 pKa = 11.84HH327 pKa = 4.69THH329 pKa = 6.92ASLLLNAGISYY340 pKa = 10.68KK341 pKa = 10.23EE342 pKa = 3.61LQYY345 pKa = 11.51RR346 pKa = 11.84LGHH349 pKa = 6.41ANISMTLDD357 pKa = 3.31IYY359 pKa = 11.6SHH361 pKa = 6.83LSKK364 pKa = 10.92DD365 pKa = 3.51KK366 pKa = 10.41EE367 pKa = 4.26KK368 pKa = 10.88EE369 pKa = 3.87AVSYY373 pKa = 10.09FEE375 pKa = 4.84KK376 pKa = 10.98AMNGLL381 pKa = 3.71

Molecular weight: 43.69 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

23

0

23

3976

44

508

172.9

19.84

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.98 ± 0.654

0.704 ± 0.158

6.212 ± 0.365

7.797 ± 0.619

4.276 ± 0.485

4.225 ± 0.343

1.258 ± 0.164

7.394 ± 0.508

10.262 ± 0.519

9.18 ± 0.679

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.817 ± 0.363

6.514 ± 0.418

3.018 ± 0.337

3.747 ± 0.367

2.968 ± 0.301

7.394 ± 0.86

6.212 ± 0.456

5.609 ± 0.288

0.88 ± 0.156

4.552 ± 0.346
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski