Sistotremastrum niveocremeum HHB9708

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetes incertae sedis; Trechisporales; Trechisporales incertae sedis; Sistotremastrum; Sistotremastrum niveocremeum

Average proteome isoelectric point is 6.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 13037 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A164RVU1|A0A164RVU1_9AGAM Uncharacterized protein OS=Sistotremastrum niveocremeum HHB9708 OX=1314777 GN=SISNIDRAFT_468170 PE=4 SV=1
VV1 pKa = 7.84DD2 pKa = 4.52DD3 pKa = 5.55ASDD6 pKa = 3.54VTYY9 pKa = 7.56TTTMNIGGRR18 pKa = 11.84DD19 pKa = 3.28ISVLIDD25 pKa = 3.37TGSSDD30 pKa = 3.7LWATGQIPNSTPTNFTADD48 pKa = 3.16VTYY51 pKa = 10.8AQGDD55 pKa = 3.41AGGYY59 pKa = 9.64ISIAPVQFAGYY70 pKa = 7.27TIPDD74 pKa = 3.23QAYY77 pKa = 9.01INVTSGDD84 pKa = 3.93PPSVDD89 pKa = 3.15GLIGLGPYY97 pKa = 8.83MGSTIRR103 pKa = 11.84TTVGSPSADD112 pKa = 2.91PVLNRR117 pKa = 11.84IFAQNTSTPNFLSFILGRR135 pKa = 11.84SSGPSQPFSGEE146 pKa = 3.91LTVGEE151 pKa = 4.46VIQGFEE157 pKa = 4.35KK158 pKa = 10.53ISGEE162 pKa = 4.25VKK164 pKa = 10.85NEE166 pKa = 3.85VQVLPTSDD174 pKa = 5.06SGDD177 pKa = 3.55QHH179 pKa = 6.37WALSLDD185 pKa = 3.98TFTGPDD191 pKa = 3.5GKK193 pKa = 10.53AIPYY197 pKa = 6.68TTTVPNEE204 pKa = 4.24SKK206 pKa = 10.47PVAVLDD212 pKa = 4.11SGFSLPQIPGNISDD226 pKa = 5.26AIYY229 pKa = 10.78GRR231 pKa = 11.84VQGAQWLTTSPVGPVWQIPCEE252 pKa = 3.97QEE254 pKa = 4.28LNISVTIGGKK264 pKa = 9.69VYY266 pKa = 9.92PIHH269 pKa = 6.73PLDD272 pKa = 3.58VSLEE276 pKa = 3.87ITINPDD282 pKa = 2.62IPNICVGAFQPSTIGFSNAAQIFDD306 pKa = 4.09MVLGMSFLRR315 pKa = 11.84NTYY318 pKa = 7.84TLINFGDD325 pKa = 4.0FVDD328 pKa = 4.3VNSSVTADD336 pKa = 4.01PYY338 pKa = 10.89IQLLSLTDD346 pKa = 3.89PGQAHH351 pKa = 6.28QDD353 pKa = 3.73FVSTRR358 pKa = 11.84LNNVDD363 pKa = 3.77TTSDD367 pKa = 3.45SQFALLPASSQQSSS381 pKa = 3.05

Molecular weight: 40.3 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A165A9D2|A0A165A9D2_9AGAM Cytochrome P450 OS=Sistotremastrum niveocremeum HHB9708 OX=1314777 GN=SISNIDRAFT_481369 PE=3 SV=1
MM1 pKa = 7.39PRR3 pKa = 11.84IPFSLSRR10 pKa = 11.84LLARR14 pKa = 11.84PLPIVQRR21 pKa = 11.84QPLVNRR27 pKa = 11.84SVSLTTHH34 pKa = 7.08LSSSIPRR41 pKa = 11.84LSSSPILRR49 pKa = 11.84AVSLLRR55 pKa = 11.84SSISLLPTTPTASHH69 pKa = 7.22LLQVRR74 pKa = 11.84FNQRR78 pKa = 11.84GVDD81 pKa = 3.75YY82 pKa = 10.92QPSQRR87 pKa = 11.84KK88 pKa = 8.81RR89 pKa = 11.84KK90 pKa = 9.17RR91 pKa = 11.84KK92 pKa = 9.36HH93 pKa = 5.58GFLARR98 pKa = 11.84LRR100 pKa = 11.84SAGGRR105 pKa = 11.84KK106 pKa = 8.73ILARR110 pKa = 11.84RR111 pKa = 11.84RR112 pKa = 11.84AKK114 pKa = 9.28GRR116 pKa = 11.84KK117 pKa = 8.14YY118 pKa = 10.54LSHH121 pKa = 7.04

Molecular weight: 13.72 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

13030

7

13037

5547635

50

4925

425.5

47.17

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.036 ± 0.018

1.249 ± 0.009

5.567 ± 0.012

5.937 ± 0.018

3.873 ± 0.014

6.161 ± 0.021

2.605 ± 0.009

5.257 ± 0.015

4.507 ± 0.017

9.582 ± 0.024

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.971 ± 0.007

3.483 ± 0.011

6.556 ± 0.029

3.687 ± 0.013

6.157 ± 0.017

9.156 ± 0.03

6.009 ± 0.014

6.123 ± 0.014

1.477 ± 0.008

2.606 ± 0.01
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski