Georgenia muralis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Bogoriellaceae; Georgenia

Average proteome isoelectric point is 6.18

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3556 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3N4ZAH6|A0A3N4ZAH6_9MICO Uncharacterized protein (TIGR02679 family) OS=Georgenia muralis OX=154117 GN=EDD32_3631 PE=4 SV=1
MM1 pKa = 7.21STRR4 pKa = 11.84KK5 pKa = 8.45LTAITAATAGALLLASCGGDD25 pKa = 3.06TGGGTGDD32 pKa = 3.21ATGGAEE38 pKa = 4.63GGDD41 pKa = 3.83DD42 pKa = 4.67PIVIGISLPLTGDD55 pKa = 3.18FAEE58 pKa = 5.01PGKK61 pKa = 10.58GVQRR65 pKa = 11.84GYY67 pKa = 8.12EE68 pKa = 3.83TWAKK72 pKa = 10.18VINDD76 pKa = 3.56GGGLLGRR83 pKa = 11.84QVEE86 pKa = 4.42LKK88 pKa = 10.5ILDD91 pKa = 4.39DD92 pKa = 4.56ASDD95 pKa = 3.68AARR98 pKa = 11.84VVADD102 pKa = 3.96YY103 pKa = 10.76EE104 pKa = 4.39SLIAQDD110 pKa = 4.03EE111 pKa = 4.63VDD113 pKa = 4.27LVMGPFSTRR122 pKa = 11.84LVVPASRR129 pKa = 11.84VADD132 pKa = 4.16EE133 pKa = 4.21YY134 pKa = 11.81GMLFVEE140 pKa = 5.08PAAAAAEE147 pKa = 4.17VFEE150 pKa = 5.11NGFEE154 pKa = 4.47NIFYY158 pKa = 9.58AAPAIAPDD166 pKa = 3.66HH167 pKa = 6.18YY168 pKa = 11.49NYY170 pKa = 11.06LLDD173 pKa = 5.22FIEE176 pKa = 5.75AMPEE180 pKa = 3.73DD181 pKa = 4.95EE182 pKa = 4.98RR183 pKa = 11.84PQTAAVAAMDD193 pKa = 4.7DD194 pKa = 4.01PFAQGTAYY202 pKa = 10.51GLRR205 pKa = 11.84DD206 pKa = 3.55GLAEE210 pKa = 4.37LGVEE214 pKa = 3.91IVVDD218 pKa = 3.95EE219 pKa = 4.8VYY221 pKa = 10.62PPNATDD227 pKa = 3.47MSAVAAQIADD237 pKa = 3.77ADD239 pKa = 4.14PDD241 pKa = 4.05VVIGGTQYY249 pKa = 11.2QDD251 pKa = 3.33AVNMILALQQLDD263 pKa = 3.88YY264 pKa = 9.97QPRR267 pKa = 11.84MAAFSTAPTNPEE279 pKa = 3.43FVEE282 pKa = 4.94AIGGAVDD289 pKa = 5.97GILSPTGYY297 pKa = 8.26TVEE300 pKa = 4.0ATFPSNEE307 pKa = 3.83EE308 pKa = 3.36FVAANEE314 pKa = 4.16EE315 pKa = 4.14LHH317 pKa = 6.19GAEE320 pKa = 4.54PGEE323 pKa = 4.65DD324 pKa = 3.12EE325 pKa = 4.84ANAYY329 pKa = 7.45TAGQVVAAAVEE340 pKa = 4.14AVGCAEE346 pKa = 5.59QGDD349 pKa = 4.4CQQDD353 pKa = 4.05LIDD356 pKa = 3.92WLHH359 pKa = 6.04EE360 pKa = 4.23NEE362 pKa = 3.88VDD364 pKa = 3.94TVVGTLGWDD373 pKa = 3.23EE374 pKa = 4.22AGRR377 pKa = 11.84PNGAHH382 pKa = 8.12LIQQYY387 pKa = 10.57VDD389 pKa = 3.48GEE391 pKa = 4.2IAIVLPADD399 pKa = 3.35VAEE402 pKa = 5.07AEE404 pKa = 4.56LIYY407 pKa = 9.76PKK409 pKa = 10.57PEE411 pKa = 3.45WW412 pKa = 3.77

Molecular weight: 43.07 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3N4Z8D2|A0A3N4Z8D2_9MICO Phosphoribosyl-AMP cyclohydrolase OS=Georgenia muralis OX=154117 GN=hisI PE=3 SV=1
MM1 pKa = 7.4GSVIKK6 pKa = 10.38KK7 pKa = 8.42RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.06RR11 pKa = 11.84MSKK14 pKa = 9.76KK15 pKa = 9.54KK16 pKa = 9.79HH17 pKa = 5.67RR18 pKa = 11.84KK19 pKa = 8.31LLRR22 pKa = 11.84KK23 pKa = 7.78TRR25 pKa = 11.84HH26 pKa = 3.65QRR28 pKa = 11.84RR29 pKa = 11.84NKK31 pKa = 9.78KK32 pKa = 9.85

Molecular weight: 4.1 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3556

0

3556

1205855

30

3017

339.1

36.0

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.424 ± 0.064

0.528 ± 0.011

6.222 ± 0.034

5.813 ± 0.038

2.495 ± 0.023

9.582 ± 0.044

2.192 ± 0.021

2.97 ± 0.03

1.413 ± 0.022

10.403 ± 0.051

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.739 ± 0.018

1.531 ± 0.023

5.955 ± 0.03

2.463 ± 0.022

8.086 ± 0.046

4.732 ± 0.024

6.302 ± 0.036

9.874 ± 0.039

1.451 ± 0.017

1.824 ± 0.019
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski