Acinetobacter phage Ac42

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; unclassified Tevenvirinae

Average proteome isoelectric point is 6.17

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 255 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E5EYP9|E5EYP9_9CAUD Uncharacterized protein OS=Acinetobacter phage Ac42 OX=762660 GN=Ac42p127 PE=4 SV=1
MM1 pKa = 7.39TLNEE5 pKa = 4.35YY6 pKa = 10.16IEE8 pKa = 4.04NLKK11 pKa = 10.63EE12 pKa = 4.18FIKK15 pKa = 10.32EE16 pKa = 3.82NPGAGEE22 pKa = 4.29LEE24 pKa = 4.65VYY26 pKa = 10.37ACSDD30 pKa = 4.58DD31 pKa = 4.28EE32 pKa = 5.03GNNCNPVVFTPSKK45 pKa = 10.94SYY47 pKa = 10.57IDD49 pKa = 3.78SDD51 pKa = 3.8GEE53 pKa = 4.22RR54 pKa = 11.84YY55 pKa = 9.79SEE57 pKa = 4.2EE58 pKa = 4.78DD59 pKa = 3.25LDD61 pKa = 4.28EE62 pKa = 5.07YY63 pKa = 11.19EE64 pKa = 4.94ADD66 pKa = 3.63EE67 pKa = 4.8LSAIVIINN75 pKa = 3.48

Molecular weight: 8.46 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E5EYH8|E5EYH8_9CAUD Uncharacterized protein OS=Acinetobacter phage Ac42 OX=762660 GN=Ac42p056 PE=4 SV=1
MM1 pKa = 7.54KK2 pKa = 10.29CQDD5 pKa = 3.08KK6 pKa = 10.01TYY8 pKa = 10.54EE9 pKa = 3.88LLARR13 pKa = 11.84LLEE16 pKa = 4.29KK17 pKa = 11.04NKK19 pKa = 10.16LLKK22 pKa = 9.62IDD24 pKa = 3.7QMRR27 pKa = 11.84VTSMKK32 pKa = 10.02RR33 pKa = 11.84RR34 pKa = 11.84NIEE37 pKa = 3.73SLKK40 pKa = 9.9YY41 pKa = 10.47SKK43 pKa = 11.05NLLAIKK49 pKa = 10.0NVNEE53 pKa = 4.6DD54 pKa = 3.32GRR56 pKa = 11.84SSRR59 pKa = 11.84MAKK62 pKa = 10.1RR63 pKa = 11.84LAKK66 pKa = 10.2QVDD69 pKa = 4.24KK70 pKa = 10.47IQKK73 pKa = 10.28RR74 pKa = 11.84IDD76 pKa = 3.62SLDD79 pKa = 3.33KK80 pKa = 10.63LQYY83 pKa = 10.79NLFVEE88 pKa = 5.22RR89 pKa = 11.84KK90 pKa = 8.81QIGLAIVKK98 pKa = 9.59IRR100 pKa = 11.84AFRR103 pKa = 11.84NSARR107 pKa = 11.84HH108 pKa = 4.52FTTKK112 pKa = 10.51GEE114 pKa = 3.76HH115 pKa = 5.8HH116 pKa = 6.29MRR118 pKa = 11.84YY119 pKa = 8.54HH120 pKa = 6.46QLLEE124 pKa = 4.27DD125 pKa = 3.77TLFTLSRR132 pKa = 11.84TGYY135 pKa = 9.12YY136 pKa = 10.66SMRR139 pKa = 11.84HH140 pKa = 4.88YY141 pKa = 10.8EE142 pKa = 4.47WGDD145 pKa = 2.77SWTSS149 pKa = 3.14

Molecular weight: 17.86 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

255

0

255

52675

18

1294

206.6

23.39

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.365 ± 0.185

1.109 ± 0.062

6.181 ± 0.108

6.823 ± 0.157

4.564 ± 0.106

5.895 ± 0.179

1.906 ± 0.076

7.026 ± 0.108

7.372 ± 0.195

8.133 ± 0.146

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.662 ± 0.084

5.657 ± 0.144

3.486 ± 0.081

3.569 ± 0.095

4.178 ± 0.098

6.77 ± 0.149

6.062 ± 0.227

6.944 ± 0.116

1.169 ± 0.061

4.123 ± 0.115
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski