Capybara microvirus Cap1_SP_119

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.12

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W471|A0A4P8W471_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_119 OX=2584811 PE=4 SV=1
MM1 pKa = 7.64KK2 pKa = 9.77PVNYY6 pKa = 9.86FNRR9 pKa = 11.84DD10 pKa = 3.28CITPKK15 pKa = 10.55NEE17 pKa = 3.98EE18 pKa = 5.07LICQSKK24 pKa = 10.62DD25 pKa = 2.74GKK27 pKa = 9.12TFFAPFPSVVAQAKK41 pKa = 10.03DD42 pKa = 3.51YY43 pKa = 11.27SLEE46 pKa = 4.04SLLAANIDD54 pKa = 3.6PSKK57 pKa = 11.04LVIKK61 pKa = 9.83VKK63 pKa = 10.84KK64 pKa = 10.48EE65 pKa = 3.6GVTDD69 pKa = 4.32FDD71 pKa = 3.97EE72 pKa = 4.28EE73 pKa = 4.84TIVVRR78 pKa = 11.84LNSIVEE84 pKa = 4.17NLDD87 pKa = 3.31EE88 pKa = 4.71SNQPNEE94 pKa = 4.11SS95 pKa = 3.32

Molecular weight: 10.67 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W7V1|A0A4P8W7V1_9VIRU Major capsid protein OS=Capybara microvirus Cap1_SP_119 OX=2584811 PE=3 SV=1
MM1 pKa = 7.98KK2 pKa = 9.94IRR4 pKa = 11.84NKK6 pKa = 9.43STFYY10 pKa = 10.78SDD12 pKa = 3.42YY13 pKa = 10.97SKK15 pKa = 8.89THH17 pKa = 6.29FDD19 pKa = 3.08IDD21 pKa = 2.92TDD23 pKa = 3.61IFVRR27 pKa = 11.84SCSSVYY33 pKa = 10.34SYY35 pKa = 10.94SVRR38 pKa = 11.84NYY40 pKa = 9.66YY41 pKa = 9.79EE42 pKa = 4.03YY43 pKa = 11.27KK44 pKa = 10.59SVIDD48 pKa = 4.06SGGQCFFYY56 pKa = 10.63TLTHH60 pKa = 6.56NDD62 pKa = 2.97SSIVRR67 pKa = 11.84LYY69 pKa = 10.92GRR71 pKa = 11.84SFPNYY76 pKa = 8.29EE77 pKa = 3.88GLRR80 pKa = 11.84NLVNGAFKK88 pKa = 10.7KK89 pKa = 10.48RR90 pKa = 11.84IEE92 pKa = 4.15KK93 pKa = 8.86LTNCRR98 pKa = 11.84FTYY101 pKa = 10.09FAVTEE106 pKa = 4.3FGEE109 pKa = 4.67GKK111 pKa = 10.45GYY113 pKa = 10.57RR114 pKa = 11.84GLDD117 pKa = 3.62NNPHH121 pKa = 4.44YY122 pKa = 10.87HH123 pKa = 6.03ILFYY127 pKa = 10.31LHH129 pKa = 7.39PCTEE133 pKa = 4.1KK134 pKa = 10.83GSYY137 pKa = 10.22VPISSNDD144 pKa = 2.84FCEE147 pKa = 3.81LVRR150 pKa = 11.84YY151 pKa = 8.07YY152 pKa = 9.92WQGDD156 pKa = 3.32KK157 pKa = 11.13YY158 pKa = 10.47HH159 pKa = 6.73YY160 pKa = 10.15KK161 pKa = 10.65DD162 pKa = 3.58SLHH165 pKa = 7.26ILEE168 pKa = 5.13PKK170 pKa = 10.38DD171 pKa = 3.75YY172 pKa = 9.8IYY174 pKa = 11.1GIASPSNINNGEE186 pKa = 4.01VTNFSAIRR194 pKa = 11.84YY195 pKa = 5.91CCKK198 pKa = 10.65YY199 pKa = 8.18ITKK202 pKa = 10.32DD203 pKa = 2.38SYY205 pKa = 11.22YY206 pKa = 10.48QVFRR210 pKa = 11.84KK211 pKa = 9.97NLLKK215 pKa = 10.47DD216 pKa = 3.51IYY218 pKa = 10.9YY219 pKa = 10.57SIVKK223 pKa = 9.97QLTLCDD229 pKa = 5.33DD230 pKa = 3.98IDD232 pKa = 3.77IQTDD236 pKa = 3.52PNYY239 pKa = 9.4VTSRR243 pKa = 11.84LISFCGSLNTAFDD256 pKa = 5.4FINEE260 pKa = 4.1QQKK263 pKa = 10.71KK264 pKa = 9.07IYY266 pKa = 9.49CSLYY270 pKa = 9.44SYY272 pKa = 10.5IHH274 pKa = 6.64LVHH277 pKa = 6.78CSKK280 pKa = 11.16KK281 pKa = 10.46LGSLGLEE288 pKa = 4.27YY289 pKa = 9.6IDD291 pKa = 4.8YY292 pKa = 10.89DD293 pKa = 4.15NNSLTIPFPDD303 pKa = 3.11SKK305 pKa = 11.37GSLRR309 pKa = 11.84QCSLPLYY316 pKa = 9.46YY317 pKa = 10.05YY318 pKa = 10.67RR319 pKa = 11.84KK320 pKa = 8.78VCYY323 pKa = 10.02DD324 pKa = 2.67ITKK327 pKa = 9.39NYY329 pKa = 9.27RR330 pKa = 11.84GNVHH334 pKa = 6.6YY335 pKa = 10.41YY336 pKa = 10.83LNDD339 pKa = 3.35YY340 pKa = 10.26GIKK343 pKa = 10.11CKK345 pKa = 10.93SNLFPKK351 pKa = 10.22DD352 pKa = 3.35LKK354 pKa = 11.08KK355 pKa = 10.83QFDD358 pKa = 3.59ICKK361 pKa = 8.58STISSYY367 pKa = 11.17FDD369 pKa = 5.2DD370 pKa = 6.36DD371 pKa = 5.83LLTDD375 pKa = 3.83YY376 pKa = 11.64NNLHH380 pKa = 6.61INSSFTYY387 pKa = 10.56QDD389 pKa = 3.06IKK391 pKa = 11.31DD392 pKa = 4.1LYY394 pKa = 11.24HH395 pKa = 7.45NDD397 pKa = 3.67EE398 pKa = 4.59LLNAYY403 pKa = 9.68VLFNFVYY410 pKa = 10.37RR411 pKa = 11.84EE412 pKa = 3.55RR413 pKa = 11.84FYY415 pKa = 11.37DD416 pKa = 3.34RR417 pKa = 11.84RR418 pKa = 11.84HH419 pKa = 5.77ISICPEE425 pKa = 3.21FDD427 pKa = 3.44YY428 pKa = 11.51EE429 pKa = 4.33HH430 pKa = 6.93FLVPSLVEE438 pKa = 3.97TPFTHH443 pKa = 7.54IEE445 pKa = 4.1PNLSKK450 pKa = 11.27YY451 pKa = 9.96EE452 pKa = 4.14SYY454 pKa = 11.38EE455 pKa = 3.63NNPYY459 pKa = 10.11FKK461 pKa = 10.42PYY463 pKa = 8.84MPKK466 pKa = 10.45FSLLDD471 pKa = 3.4EE472 pKa = 5.0LFTFFKK478 pKa = 9.94KK479 pKa = 8.61TAQEE483 pKa = 4.09YY484 pKa = 10.16KK485 pKa = 9.01IKK487 pKa = 10.21EE488 pKa = 4.03YY489 pKa = 10.58EE490 pKa = 3.65RR491 pKa = 11.84RR492 pKa = 11.84KK493 pKa = 8.88YY494 pKa = 10.47LKK496 pKa = 9.98RR497 pKa = 11.84VHH499 pKa = 5.66STQNII504 pKa = 3.46

Molecular weight: 60.12 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1633

95

583

326.6

37.54

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.735 ± 0.885

1.715 ± 0.642

5.94 ± 0.587

5.266 ± 0.647

6.185 ± 0.625

4.838 ± 0.816

1.776 ± 0.538

6.491 ± 0.252

6.552 ± 0.678

8.757 ± 0.572

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.653 ± 0.571

7.655 ± 0.307

3.429 ± 0.411

3.184 ± 0.587

4.287 ± 0.368

10.533 ± 0.882

4.654 ± 0.354

6.062 ± 0.711

0.367 ± 0.114

6.92 ± 1.51
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski