Pacific flying fox faeces associated gemycircularvirus-10

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; Gemycircularvirus; Gemycircularvirus ptero1; Pteropus associated gemycircularvirus 1

Average proteome isoelectric point is 6.46

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A140CTP6|A0A140CTP6_9VIRU RepA OS=Pacific flying fox faeces associated gemycircularvirus-10 OX=1795989 PE=3 SV=1
MM1 pKa = 7.67PLAVNAQHH9 pKa = 7.09FLLTYY14 pKa = 10.77AHH16 pKa = 6.8VEE18 pKa = 4.23GNDD21 pKa = 4.12DD22 pKa = 4.83KK23 pKa = 11.84PEE25 pKa = 4.66LDD27 pKa = 3.51PFRR30 pKa = 11.84IVDD33 pKa = 3.47VLGAKK38 pKa = 9.68GAEE41 pKa = 4.05CIVARR46 pKa = 11.84EE47 pKa = 4.39FYY49 pKa = 9.97PNTGGFHH56 pKa = 5.74FHH58 pKa = 6.18VFCSFEE64 pKa = 4.49RR65 pKa = 11.84NFRR68 pKa = 11.84SRR70 pKa = 11.84KK71 pKa = 9.65ADD73 pKa = 3.32VFDD76 pKa = 3.53VDD78 pKa = 5.1GYY80 pKa = 10.96HH81 pKa = 7.21PNIEE85 pKa = 4.12PSRR88 pKa = 11.84KK89 pKa = 8.63NAAGGFDD96 pKa = 4.07YY97 pKa = 9.3ATKK100 pKa = 10.78DD101 pKa = 3.18GDD103 pKa = 3.7IVAGGLEE110 pKa = 4.28RR111 pKa = 11.84PSRR114 pKa = 11.84TRR116 pKa = 11.84GRR118 pKa = 11.84AGTTGAQATWGEE130 pKa = 3.89ITAAEE135 pKa = 4.18SAEE138 pKa = 4.28EE139 pKa = 4.01FWRR142 pKa = 11.84LCEE145 pKa = 3.96EE146 pKa = 4.93LDD148 pKa = 3.94PKK150 pKa = 11.64SMVCNFPALSKK161 pKa = 9.48FAEE164 pKa = 4.1WRR166 pKa = 11.84FRR168 pKa = 11.84PIPVPYY174 pKa = 10.04ASPDD178 pKa = 3.48GVFDD182 pKa = 3.56TSGYY186 pKa = 9.74PIIEE190 pKa = 4.28EE191 pKa = 4.04WRR193 pKa = 11.84SSVFDD198 pKa = 4.0EE199 pKa = 4.2YY200 pKa = 11.35SGRR203 pKa = 11.84GEE205 pKa = 4.34SYY207 pKa = 10.05TYY209 pKa = 9.51LTSLVLFGPTRR220 pKa = 11.84LGKK223 pKa = 6.32TTWARR228 pKa = 11.84SLGSHH233 pKa = 6.88IYY235 pKa = 10.5FGGLFSAGEE244 pKa = 3.96AMRR247 pKa = 11.84CPEE250 pKa = 4.14AEE252 pKa = 4.08YY253 pKa = 10.59AIMDD257 pKa = 5.62DD258 pKa = 3.07IAGGIKK264 pKa = 10.03FFPRR268 pKa = 11.84FKK270 pKa = 10.86DD271 pKa = 3.16WLGCQAQFQLKK282 pKa = 9.74VLYY285 pKa = 10.02KK286 pKa = 10.74EE287 pKa = 3.79PALYY291 pKa = 10.33DD292 pKa = 3.25WGKK295 pKa = 9.31PCIWCYY301 pKa = 10.84NVDD304 pKa = 3.46PRR306 pKa = 11.84AGMSVEE312 pKa = 4.32DD313 pKa = 4.27IEE315 pKa = 4.34WLEE318 pKa = 4.17GNCVFVEE325 pKa = 3.98ITSPIFHH332 pKa = 7.38ANTEE336 pKa = 4.14

Molecular weight: 37.73 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A140CTP5|A0A140CTP5_9VIRU Replication-associated protein OS=Pacific flying fox faeces associated gemycircularvirus-10 OX=1795989 PE=3 SV=1
MM1 pKa = 7.87AYY3 pKa = 10.08ARR5 pKa = 11.84SSTRR9 pKa = 11.84RR10 pKa = 11.84SYY12 pKa = 10.85RR13 pKa = 11.84RR14 pKa = 11.84SSRR17 pKa = 11.84YY18 pKa = 8.8ARR20 pKa = 11.84RR21 pKa = 11.84KK22 pKa = 8.87IPHH25 pKa = 4.55TRR27 pKa = 11.84RR28 pKa = 11.84RR29 pKa = 11.84YY30 pKa = 8.87VKK32 pKa = 8.37RR33 pKa = 11.84TSRR36 pKa = 11.84TPYY39 pKa = 8.78RR40 pKa = 11.84RR41 pKa = 11.84KK42 pKa = 8.27MTQKK46 pKa = 10.65KK47 pKa = 9.43ILNLTSIKK55 pKa = 10.5KK56 pKa = 9.71RR57 pKa = 11.84DD58 pKa = 3.61TMLSLTNVIADD69 pKa = 4.14RR70 pKa = 11.84SRR72 pKa = 11.84PTSYY76 pKa = 10.5TSNDD80 pKa = 3.02AVLSGGAQPYY90 pKa = 9.23IIPWVATARR99 pKa = 11.84TTTVNGTKK107 pKa = 9.95QGTIATSATRR117 pKa = 11.84SSTTCYY123 pKa = 10.16IRR125 pKa = 11.84GLRR128 pKa = 11.84EE129 pKa = 4.3DD130 pKa = 3.39IEE132 pKa = 4.78INVFTGCPWQWRR144 pKa = 11.84RR145 pKa = 11.84IVFFSKK151 pKa = 10.79GLTNAVGTPGSNFYY165 pKa = 10.43YY166 pKa = 10.78FNVTAEE172 pKa = 4.26DD173 pKa = 3.57YY174 pKa = 10.72RR175 pKa = 11.84RR176 pKa = 11.84TVNEE180 pKa = 3.7IYY182 pKa = 10.51GAYY185 pKa = 10.44ANGLNAFLFKK195 pKa = 10.25GTEE198 pKa = 4.03GSDD201 pKa = 3.11WNDD204 pKa = 3.1LMIAPVDD211 pKa = 3.67TTRR214 pKa = 11.84VSVLYY219 pKa = 10.78DD220 pKa = 3.16KK221 pKa = 10.97TRR223 pKa = 11.84TIASGNEE230 pKa = 3.37EE231 pKa = 4.02GVIRR235 pKa = 11.84KK236 pKa = 9.39YY237 pKa = 11.38KK238 pKa = 8.64MWHH241 pKa = 5.6GVNKK245 pKa = 10.27NLTYY249 pKa = 11.09DD250 pKa = 3.81DD251 pKa = 5.41DD252 pKa = 4.42EE253 pKa = 5.82FGGDD257 pKa = 3.33EE258 pKa = 4.33TTSNLSTLSKK268 pKa = 10.5VGCGDD273 pKa = 3.41MMVVDD278 pKa = 3.81IFKK281 pKa = 10.46PRR283 pKa = 11.84GGSAGEE289 pKa = 3.88DD290 pKa = 2.51RR291 pKa = 11.84MAFKK295 pKa = 10.8PNATLYY301 pKa = 8.81WHH303 pKa = 6.99EE304 pKa = 4.27KK305 pKa = 9.3

Molecular weight: 34.64 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

879

238

336

293.0

32.98

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.191 ± 0.665

1.934 ± 0.403

5.688 ± 0.18

6.371 ± 1.125

6.143 ± 1.166

8.532 ± 0.41

1.82 ± 0.351

4.551 ± 0.404

4.323 ± 0.668

5.575 ± 0.266

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.706 ± 0.395

3.868 ± 0.691

5.575 ± 0.969

1.365 ± 0.052

7.85 ± 0.995

6.598 ± 0.532

7.395 ± 1.67

5.802 ± 0.062

2.162 ± 0.221

4.551 ± 0.422
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski