Amino acid dipepetide frequency for Mischivirus A (isolate Miniopterus schreibersii/China/MsPV-1/2010) (MscPV1)

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
7.018AlaAla: 7.018 ± 0.0
0.877AlaCys: 0.877 ± 0.0
1.316AlaAsp: 1.316 ± 0.0
0.877AlaGlu: 0.877 ± 0.0
5.263AlaPhe: 5.263 ± 0.0
6.579AlaGly: 6.579 ± 0.0
2.193AlaHis: 2.193 ± 0.0
4.386AlaIle: 4.386 ± 0.0
3.947AlaLys: 3.947 ± 0.0
3.947AlaLeu: 3.947 ± 0.0
1.754AlaMet: 1.754 ± 0.0
4.825AlaAsn: 4.825 ± 0.0
4.386AlaPro: 4.386 ± 0.0
3.07AlaGln: 3.07 ± 0.0
0.439AlaArg: 0.439 ± 0.0
5.702AlaSer: 5.702 ± 0.0
7.018AlaThr: 7.018 ± 0.0
7.018AlaVal: 7.018 ± 0.0
0.439AlaTrp: 0.439 ± 0.0
2.632AlaTyr: 2.632 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.439CysAla: 0.439 ± 0.0
0.439CysCys: 0.439 ± 0.0
0.877CysAsp: 0.877 ± 0.0
1.316CysGlu: 1.316 ± 0.0
1.754CysPhe: 1.754 ± 0.0
1.316CysGly: 1.316 ± 0.0
0.439CysHis: 0.439 ± 0.0
0.0CysIle: 0.0 ± 0.0
0.439CysLys: 0.439 ± 0.0
0.439CysLeu: 0.439 ± 0.0
0.0CysMet: 0.0 ± 0.0
0.877CysAsn: 0.877 ± 0.0
1.754CysPro: 1.754 ± 0.0
1.316CysGln: 1.316 ± 0.0
0.439CysArg: 0.439 ± 0.0
2.632CysSer: 2.632 ± 0.0
0.439CysThr: 0.439 ± 0.0
0.877CysVal: 0.877 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.877CysTyr: 0.877 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
3.07AspAla: 3.07 ± 0.0
0.877AspCys: 0.877 ± 0.0
2.193AspAsp: 2.193 ± 0.0
3.07AspGlu: 3.07 ± 0.0
6.579AspPhe: 6.579 ± 0.0
4.386AspGly: 4.386 ± 0.0
0.877AspHis: 0.877 ± 0.0
2.632AspIle: 2.632 ± 0.0
1.754AspLys: 1.754 ± 0.0
5.263AspLeu: 5.263 ± 0.0
0.439AspMet: 0.439 ± 0.0
1.316AspAsn: 1.316 ± 0.0
2.632AspPro: 2.632 ± 0.0
2.193AspGln: 2.193 ± 0.0
2.632AspArg: 2.632 ± 0.0
2.632AspSer: 2.632 ± 0.0
1.754AspThr: 1.754 ± 0.0
3.509AspVal: 3.509 ± 0.0
1.754AspTrp: 1.754 ± 0.0
2.193AspTyr: 2.193 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
3.07GluAla: 3.07 ± 0.0
1.754GluCys: 1.754 ± 0.0
5.263GluAsp: 5.263 ± 0.0
6.14GluGlu: 6.14 ± 0.0
1.754GluPhe: 1.754 ± 0.0
3.509GluGly: 3.509 ± 0.0
1.754GluHis: 1.754 ± 0.0
4.825GluIle: 4.825 ± 0.0
1.754GluLys: 1.754 ± 0.0
3.947GluLeu: 3.947 ± 0.0
0.439GluMet: 0.439 ± 0.0
2.193GluAsn: 2.193 ± 0.0
4.825GluPro: 4.825 ± 0.0
0.877GluGln: 0.877 ± 0.0
3.947GluArg: 3.947 ± 0.0
1.754GluSer: 1.754 ± 0.0
4.825GluThr: 4.825 ± 0.0
3.509GluVal: 3.509 ± 0.0
0.877GluTrp: 0.877 ± 0.0
1.316GluTyr: 1.316 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
4.386PheAla: 4.386 ± 0.0
1.754PheCys: 1.754 ± 0.0
2.193PheAsp: 2.193 ± 0.0
3.947PheGlu: 3.947 ± 0.0
1.754PhePhe: 1.754 ± 0.0
2.193PheGly: 2.193 ± 0.0
2.193PheHis: 2.193 ± 0.0
3.07PheIle: 3.07 ± 0.0
1.754PheLys: 1.754 ± 0.0
5.702PheLeu: 5.702 ± 0.0
1.754PheMet: 1.754 ± 0.0
1.754PheAsn: 1.754 ± 0.0
3.509PhePro: 3.509 ± 0.0
1.754PheGln: 1.754 ± 0.0
1.754PheArg: 1.754 ± 0.0
3.509PheSer: 3.509 ± 0.0
6.14PheThr: 6.14 ± 0.0
3.07PheVal: 3.07 ± 0.0
0.439PheTrp: 0.439 ± 0.0
3.07PheTyr: 3.07 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
3.509GlyAla: 3.509 ± 0.0
1.316GlyCys: 1.316 ± 0.0
2.193GlyAsp: 2.193 ± 0.0
3.07GlyGlu: 3.07 ± 0.0
1.754GlyPhe: 1.754 ± 0.0
2.632GlyGly: 2.632 ± 0.0
0.439GlyHis: 0.439 ± 0.0
3.07GlyIle: 3.07 ± 0.0
4.386GlyLys: 4.386 ± 0.0
7.018GlyLeu: 7.018 ± 0.0
1.754GlyMet: 1.754 ± 0.0
3.947GlyAsn: 3.947 ± 0.0
6.579GlyPro: 6.579 ± 0.0
2.193GlyGln: 2.193 ± 0.0
2.632GlyArg: 2.632 ± 0.0
5.263GlySer: 5.263 ± 0.0
6.14GlyThr: 6.14 ± 0.0
1.754GlyVal: 1.754 ± 0.0
2.632GlyTrp: 2.632 ± 0.0
1.316GlyTyr: 1.316 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
0.877HisAla: 0.877 ± 0.0
0.0HisCys: 0.0 ± 0.0
0.877HisAsp: 0.877 ± 0.0
1.316HisGlu: 1.316 ± 0.0
1.754HisPhe: 1.754 ± 0.0
1.316HisGly: 1.316 ± 0.0
0.439HisHis: 0.439 ± 0.0
1.754HisIle: 1.754 ± 0.0
0.439HisLys: 0.439 ± 0.0
1.754HisLeu: 1.754 ± 0.0
0.0HisMet: 0.0 ± 0.0
1.316HisAsn: 1.316 ± 0.0
0.439HisPro: 0.439 ± 0.0
0.439HisGln: 0.439 ± 0.0
0.877HisArg: 0.877 ± 0.0
3.07HisSer: 3.07 ± 0.0
3.509HisThr: 3.509 ± 0.0
0.877HisVal: 0.877 ± 0.0
0.877HisTrp: 0.877 ± 0.0
0.0HisTyr: 0.0 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
0.877IleAla: 0.877 ± 0.0
0.877IleCys: 0.877 ± 0.0
1.754IleAsp: 1.754 ± 0.0
2.632IleGlu: 2.632 ± 0.0
1.316IlePhe: 1.316 ± 0.0
1.754IleGly: 1.754 ± 0.0
0.877IleHis: 0.877 ± 0.0
5.263IleIle: 5.263 ± 0.0
1.754IleLys: 1.754 ± 0.0
5.263IleLeu: 5.263 ± 0.0
0.439IleMet: 0.439 ± 0.0
1.754IleAsn: 1.754 ± 0.0
4.825IlePro: 4.825 ± 0.0
2.632IleGln: 2.632 ± 0.0
3.509IleArg: 3.509 ± 0.0
4.825IleSer: 4.825 ± 0.0
2.632IleThr: 2.632 ± 0.0
2.193IleVal: 2.193 ± 0.0
0.877IleTrp: 0.877 ± 0.0
0.877IleTyr: 0.877 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
3.947LysAla: 3.947 ± 0.0
0.439LysCys: 0.439 ± 0.0
4.825LysAsp: 4.825 ± 0.0
3.07LysGlu: 3.07 ± 0.0
3.07LysPhe: 3.07 ± 0.0
4.825LysGly: 4.825 ± 0.0
1.316LysHis: 1.316 ± 0.0
1.754LysIle: 1.754 ± 0.0
2.193LysLys: 2.193 ± 0.0
6.14LysLeu: 6.14 ± 0.0
0.439LysMet: 0.439 ± 0.0
2.632LysAsn: 2.632 ± 0.0
3.07LysPro: 3.07 ± 0.0
2.632LysGln: 2.632 ± 0.0
3.07LysArg: 3.07 ± 0.0
2.193LysSer: 2.193 ± 0.0
3.07LysThr: 3.07 ± 0.0
2.193LysVal: 2.193 ± 0.0
0.0LysTrp: 0.0 ± 0.0
1.754LysTyr: 1.754 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
8.772LeuAla: 8.772 ± 0.0
1.754LeuCys: 1.754 ± 0.0
6.14LeuAsp: 6.14 ± 0.0
6.14LeuGlu: 6.14 ± 0.0
2.632LeuPhe: 2.632 ± 0.0
3.509LeuGly: 3.509 ± 0.0
2.193LeuHis: 2.193 ± 0.0
3.07LeuIle: 3.07 ± 0.0
5.263LeuLys: 5.263 ± 0.0
8.333LeuLeu: 8.333 ± 0.0
1.754LeuMet: 1.754 ± 0.0
2.632LeuAsn: 2.632 ± 0.0
2.632LeuPro: 2.632 ± 0.0
3.07LeuGln: 3.07 ± 0.0
3.509LeuArg: 3.509 ± 0.0
7.895LeuSer: 7.895 ± 0.0
6.579LeuThr: 6.579 ± 0.0
5.263LeuVal: 5.263 ± 0.0
0.439LeuTrp: 0.439 ± 0.0
2.193LeuTyr: 2.193 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
3.947MetAla: 3.947 ± 0.0
0.0MetCys: 0.0 ± 0.0
2.193MetAsp: 2.193 ± 0.0
1.316MetGlu: 1.316 ± 0.0
2.193MetPhe: 2.193 ± 0.0
0.439MetGly: 0.439 ± 0.0
0.877MetHis: 0.877 ± 0.0
1.316MetIle: 1.316 ± 0.0
1.754MetLys: 1.754 ± 0.0
0.877MetLeu: 0.877 ± 0.0
0.0MetMet: 0.0 ± 0.0
1.754MetAsn: 1.754 ± 0.0
0.877MetPro: 0.877 ± 0.0
0.0MetGln: 0.0 ± 0.0
0.877MetArg: 0.877 ± 0.0
0.877MetSer: 0.877 ± 0.0
1.754MetThr: 1.754 ± 0.0
1.316MetVal: 1.316 ± 0.0
0.0MetTrp: 0.0 ± 0.0
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
1.754AsnAla: 1.754 ± 0.0
0.877AsnCys: 0.877 ± 0.0
1.316AsnAsp: 1.316 ± 0.0
2.193AsnGlu: 2.193 ± 0.0
3.947AsnPhe: 3.947 ± 0.0
3.509AsnGly: 3.509 ± 0.0
0.877AsnHis: 0.877 ± 0.0
0.877AsnIle: 0.877 ± 0.0
2.632AsnLys: 2.632 ± 0.0
5.263AsnLeu: 5.263 ± 0.0
0.439AsnMet: 0.439 ± 0.0
4.386AsnAsn: 4.386 ± 0.0
3.947AsnPro: 3.947 ± 0.0
1.754AsnGln: 1.754 ± 0.0
0.439AsnArg: 0.439 ± 0.0
3.947AsnSer: 3.947 ± 0.0
4.386AsnThr: 4.386 ± 0.0
2.193AsnVal: 2.193 ± 0.0
0.877AsnTrp: 0.877 ± 0.0
2.193AsnTyr: 2.193 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
4.386ProAla: 4.386 ± 0.0
0.439ProCys: 0.439 ± 0.0
5.702ProAsp: 5.702 ± 0.0
6.14ProGlu: 6.14 ± 0.0
3.07ProPhe: 3.07 ± 0.0
4.825ProGly: 4.825 ± 0.0
1.316ProHis: 1.316 ± 0.0
2.632ProIle: 2.632 ± 0.0
4.825ProLys: 4.825 ± 0.0
3.07ProLeu: 3.07 ± 0.0
2.193ProMet: 2.193 ± 0.0
1.316ProAsn: 1.316 ± 0.0
8.333ProPro: 8.333 ± 0.0
1.316ProGln: 1.316 ± 0.0
1.316ProArg: 1.316 ± 0.0
5.263ProSer: 5.263 ± 0.0
4.386ProThr: 4.386 ± 0.0
5.702ProVal: 5.702 ± 0.0
0.0ProTrp: 0.0 ± 0.0
2.193ProTyr: 2.193 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
3.07GlnAla: 3.07 ± 0.0
0.439GlnCys: 0.439 ± 0.0
1.316GlnAsp: 1.316 ± 0.0
1.754GlnGlu: 1.754 ± 0.0
0.877GlnPhe: 0.877 ± 0.0
2.632GlnGly: 2.632 ± 0.0
0.439GlnHis: 0.439 ± 0.0
3.07GlnIle: 3.07 ± 0.0
1.316GlnLys: 1.316 ± 0.0
3.509GlnLeu: 3.509 ± 0.0
2.632GlnMet: 2.632 ± 0.0
0.877GlnAsn: 0.877 ± 0.0
1.754GlnPro: 1.754 ± 0.0
1.754GlnGln: 1.754 ± 0.0
0.877GlnArg: 0.877 ± 0.0
3.07GlnSer: 3.07 ± 0.0
1.754GlnThr: 1.754 ± 0.0
2.632GlnVal: 2.632 ± 0.0
0.439GlnTrp: 0.439 ± 0.0
1.754GlnTyr: 1.754 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
3.07ArgAla: 3.07 ± 0.0
0.439ArgCys: 0.439 ± 0.0
1.316ArgAsp: 1.316 ± 0.0
3.07ArgGlu: 3.07 ± 0.0
2.632ArgPhe: 2.632 ± 0.0
1.316ArgGly: 1.316 ± 0.0
1.316ArgHis: 1.316 ± 0.0
1.754ArgIle: 1.754 ± 0.0
1.754ArgLys: 1.754 ± 0.0
3.07ArgLeu: 3.07 ± 0.0
1.754ArgMet: 1.754 ± 0.0
0.877ArgAsn: 0.877 ± 0.0
3.07ArgPro: 3.07 ± 0.0
1.754ArgGln: 1.754 ± 0.0
1.754ArgArg: 1.754 ± 0.0
1.754ArgSer: 1.754 ± 0.0
3.509ArgThr: 3.509 ± 0.0
1.754ArgVal: 1.754 ± 0.0
0.439ArgTrp: 0.439 ± 0.0
0.439ArgTyr: 0.439 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
9.649SerAla: 9.649 ± 0.0
1.316SerCys: 1.316 ± 0.0
3.947SerAsp: 3.947 ± 0.0
3.947SerGlu: 3.947 ± 0.0
4.386SerPhe: 4.386 ± 0.0
5.702SerGly: 5.702 ± 0.0
1.754SerHis: 1.754 ± 0.0
1.316SerIle: 1.316 ± 0.0
4.825SerLys: 4.825 ± 0.0
5.702SerLeu: 5.702 ± 0.0
1.316SerMet: 1.316 ± 0.0
3.947SerAsn: 3.947 ± 0.0
3.509SerPro: 3.509 ± 0.0
1.316SerGln: 1.316 ± 0.0
1.316SerArg: 1.316 ± 0.0
4.386SerSer: 4.386 ± 0.0
6.14SerThr: 6.14 ± 0.0
5.702SerVal: 5.702 ± 0.0
1.316SerTrp: 1.316 ± 0.0
3.07SerTyr: 3.07 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
4.825ThrAla: 4.825 ± 0.0
1.754ThrCys: 1.754 ± 0.0
3.07ThrAsp: 3.07 ± 0.0
2.632ThrGlu: 2.632 ± 0.0
4.386ThrPhe: 4.386 ± 0.0
6.579ThrGly: 6.579 ± 0.0
0.877ThrHis: 0.877 ± 0.0
2.632ThrIle: 2.632 ± 0.0
6.579ThrLys: 6.579 ± 0.0
5.702ThrLeu: 5.702 ± 0.0
1.316ThrMet: 1.316 ± 0.0
5.702ThrAsn: 5.702 ± 0.0
6.14ThrPro: 6.14 ± 0.0
4.825ThrGln: 4.825 ± 0.0
2.632ThrArg: 2.632 ± 0.0
5.702ThrSer: 5.702 ± 0.0
8.772ThrThr: 8.772 ± 0.0
2.632ThrVal: 2.632 ± 0.0
0.877ThrTrp: 0.877 ± 0.0
4.386ThrTyr: 4.386 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
4.386ValAla: 4.386 ± 0.0
0.439ValCys: 0.439 ± 0.0
2.632ValAsp: 2.632 ± 0.0
3.509ValGlu: 3.509 ± 0.0
3.947ValPhe: 3.947 ± 0.0
3.509ValGly: 3.509 ± 0.0
0.877ValHis: 0.877 ± 0.0
1.316ValIle: 1.316 ± 0.0
2.632ValLys: 2.632 ± 0.0
5.702ValLeu: 5.702 ± 0.0
1.754ValMet: 1.754 ± 0.0
2.193ValAsn: 2.193 ± 0.0
3.947ValPro: 3.947 ± 0.0
2.193ValGln: 2.193 ± 0.0
2.193ValArg: 2.193 ± 0.0
4.825ValSer: 4.825 ± 0.0
4.825ValThr: 4.825 ± 0.0
6.14ValVal: 6.14 ± 0.0
0.877ValTrp: 0.877 ± 0.0
1.754ValTyr: 1.754 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.439TrpAla: 0.439 ± 0.0
0.439TrpCys: 0.439 ± 0.0
0.439TrpAsp: 0.439 ± 0.0
0.439TrpGlu: 0.439 ± 0.0
1.754TrpPhe: 1.754 ± 0.0
0.0TrpGly: 0.0 ± 0.0
0.439TrpHis: 0.439 ± 0.0
0.877TrpIle: 0.877 ± 0.0
0.0TrpLys: 0.0 ± 0.0
1.316TrpLeu: 1.316 ± 0.0
0.439TrpMet: 0.439 ± 0.0
1.754TrpAsn: 1.754 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.0TrpGln: 0.0 ± 0.0
1.316TrpArg: 1.316 ± 0.0
0.0TrpSer: 0.0 ± 0.0
2.193TrpThr: 2.193 ± 0.0
0.0TrpVal: 0.0 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
1.316TrpTyr: 1.316 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.193TyrAla: 2.193 ± 0.0
0.439TyrCys: 0.439 ± 0.0
2.632TyrAsp: 2.632 ± 0.0
1.754TyrGlu: 1.754 ± 0.0
0.877TyrPhe: 0.877 ± 0.0
3.07TyrGly: 3.07 ± 0.0
0.439TyrHis: 0.439 ± 0.0
1.316TyrIle: 1.316 ± 0.0
2.632TyrLys: 2.632 ± 0.0
1.754TyrLeu: 1.754 ± 0.0
1.316TyrMet: 1.316 ± 0.0
1.754TyrAsn: 1.754 ± 0.0
2.193TyrPro: 2.193 ± 0.0
0.877TyrGln: 0.877 ± 0.0
1.316TyrArg: 1.316 ± 0.0
5.263TyrSer: 5.263 ± 0.0
2.193TyrThr: 2.193 ± 0.0
1.316TyrVal: 1.316 ± 0.0
0.0TyrTrp: 0.0 ± 0.0
0.877TyrTyr: 0.877 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2281 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski