CRESS virus sp. ct6pe1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; unclassified Cressdnaviricota; CRESS viruses

Average proteome isoelectric point is 8.16

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5Q2WBB5|A0A5Q2WBB5_9VIRU Rep protein OS=CRESS virus sp. ct6pe1 OX=2656676 PE=4 SV=1
MM1 pKa = 7.7PAAQARR7 pKa = 11.84RR8 pKa = 11.84FCFTLNNYY16 pKa = 7.93TPEE19 pKa = 4.29DD20 pKa = 3.67VAHH23 pKa = 6.9IEE25 pKa = 4.17SLYY28 pKa = 11.06LNADD32 pKa = 3.01NHH34 pKa = 5.06ITYY37 pKa = 10.37LVIGRR42 pKa = 11.84EE43 pKa = 4.33VGDD46 pKa = 3.43SGTPHH51 pKa = 6.38LQGFICFSRR60 pKa = 11.84RR61 pKa = 11.84KK62 pKa = 7.52TFNVVKK68 pKa = 10.57ALINEE73 pKa = 4.98RR74 pKa = 11.84IHH76 pKa = 8.47IEE78 pKa = 4.06GARR81 pKa = 11.84GTSDD85 pKa = 3.86QAATYY90 pKa = 9.19CKK92 pKa = 10.12KK93 pKa = 10.65DD94 pKa = 3.08GAYY97 pKa = 9.27TEE99 pKa = 4.8FGTVPVSGKK108 pKa = 8.36TNYY111 pKa = 10.7LEE113 pKa = 6.47DD114 pKa = 3.86FFKK117 pKa = 10.56WADD120 pKa = 3.48QFHH123 pKa = 7.33EE124 pKa = 4.73DD125 pKa = 3.63NGRR128 pKa = 11.84IPTARR133 pKa = 11.84DD134 pKa = 2.93VALEE138 pKa = 4.04HH139 pKa = 6.43PVVLTRR145 pKa = 11.84HH146 pKa = 6.03RR147 pKa = 11.84NVLDD151 pKa = 3.54VLEE154 pKa = 4.87SRR156 pKa = 11.84APPPSLVTNPQPRR169 pKa = 11.84PWQLEE174 pKa = 4.29LEE176 pKa = 4.28EE177 pKa = 5.29HH178 pKa = 6.16LTDD181 pKa = 4.54DD182 pKa = 4.05TPDD185 pKa = 3.4DD186 pKa = 3.59RR187 pKa = 11.84TVEE190 pKa = 4.05FFVDD194 pKa = 3.56EE195 pKa = 4.36EE196 pKa = 4.52GGKK199 pKa = 10.11GKK201 pKa = 10.14SWFQRR206 pKa = 11.84HH207 pKa = 5.99MLTKK211 pKa = 10.5YY212 pKa = 9.53PDD214 pKa = 3.87RR215 pKa = 11.84VQMLAPGKK223 pKa = 10.08RR224 pKa = 11.84DD225 pKa = 3.9DD226 pKa = 4.31LAHH229 pKa = 6.75TIDD232 pKa = 3.36IQKK235 pKa = 10.71SIFLMNVPKK244 pKa = 9.55TQMEE248 pKa = 4.36FLQYY252 pKa = 10.87SILEE256 pKa = 4.06QLKK259 pKa = 10.27DD260 pKa = 3.4RR261 pKa = 11.84TVFSPKK267 pKa = 8.73YY268 pKa = 7.05TSKK271 pKa = 10.38MKK273 pKa = 10.61VLSAPAHH280 pKa = 5.4VIVFSNEE287 pKa = 3.72HH288 pKa = 6.41PDD290 pKa = 3.72MNKK293 pKa = 9.18MSADD297 pKa = 3.78RR298 pKa = 11.84YY299 pKa = 10.49HH300 pKa = 6.34ITILDD305 pKa = 3.51

Molecular weight: 34.99 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5Q2WBB5|A0A5Q2WBB5_9VIRU Rep protein OS=CRESS virus sp. ct6pe1 OX=2656676 PE=4 SV=1
MM1 pKa = 7.0KK2 pKa = 10.38HH3 pKa = 5.13NWTRR7 pKa = 11.84PIVKK11 pKa = 10.0FIEE14 pKa = 5.0DD15 pKa = 4.05DD16 pKa = 3.9LVASGIGGATGPARR30 pKa = 11.84FFAARR35 pKa = 11.84GAGLVGDD42 pKa = 4.99GVNKK46 pKa = 9.18TWGSGDD52 pKa = 3.27TRR54 pKa = 11.84TWSAWDD60 pKa = 3.26NMFVQKK66 pKa = 10.44SGQYY70 pKa = 7.36GQKK73 pKa = 9.64RR74 pKa = 11.84RR75 pKa = 11.84RR76 pKa = 11.84FTPTRR81 pKa = 11.84GKK83 pKa = 10.41RR84 pKa = 11.84GVRR87 pKa = 11.84LYY89 pKa = 9.71RR90 pKa = 11.84RR91 pKa = 11.84KK92 pKa = 10.18YY93 pKa = 7.88IRR95 pKa = 11.84RR96 pKa = 11.84RR97 pKa = 11.84PRR99 pKa = 11.84MMRR102 pKa = 11.84RR103 pKa = 11.84SRR105 pKa = 11.84ASWGTRR111 pKa = 11.84VRR113 pKa = 11.84RR114 pKa = 11.84AALRR118 pKa = 11.84SNEE121 pKa = 4.35SKK123 pKa = 10.22RR124 pKa = 11.84HH125 pKa = 4.09QVTTITEE132 pKa = 4.73AIDD135 pKa = 4.05DD136 pKa = 4.07QVLDD140 pKa = 3.75TTAIARR146 pKa = 11.84VPDD149 pKa = 4.18LDD151 pKa = 3.57QGAGGIEE158 pKa = 4.17GMSSKK163 pKa = 10.3ISRR166 pKa = 11.84NGATIITTGIASWIHH181 pKa = 5.52IRR183 pKa = 11.84NSSTVQAMRR192 pKa = 11.84VDD194 pKa = 4.28LVWFYY199 pKa = 11.66KK200 pKa = 10.49KK201 pKa = 10.14RR202 pKa = 11.84DD203 pKa = 3.58VGAVQAIFKK212 pKa = 10.21DD213 pKa = 3.8NQFEE217 pKa = 4.88AINSPSDD224 pKa = 3.31PTSYY228 pKa = 9.44FARR231 pKa = 11.84MIMPYY236 pKa = 10.88GNLNTVILKK245 pKa = 10.58KK246 pKa = 10.1LTIDD250 pKa = 3.36LAEE253 pKa = 4.71AGEE256 pKa = 4.42TAGTEE261 pKa = 3.96SRR263 pKa = 11.84MLKK266 pKa = 9.65VWLPFKK272 pKa = 10.8KK273 pKa = 10.45VMKK276 pKa = 10.49FNYY279 pKa = 8.95TSEE282 pKa = 3.99GTTNQDD288 pKa = 2.52YY289 pKa = 10.73DD290 pKa = 3.26IHH292 pKa = 8.03FGIRR296 pKa = 11.84CHH298 pKa = 6.14NKK300 pKa = 8.99EE301 pKa = 3.79GQAFSTTTNVLIAQHH316 pKa = 5.85RR317 pKa = 11.84HH318 pKa = 3.41VLYY321 pKa = 10.79FRR323 pKa = 11.84DD324 pKa = 3.69PP325 pKa = 3.42

Molecular weight: 36.81 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

691

61

325

230.3

26.24

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.946 ± 0.656

0.724 ± 0.263

6.078 ± 0.874

4.342 ± 1.029

4.631 ± 0.341

6.512 ± 1.3

3.039 ± 0.672

5.933 ± 0.576

5.355 ± 0.576

6.223 ± 1.02

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.039 ± 0.306

4.197 ± 0.141

4.631 ± 0.988

3.473 ± 0.524

8.828 ± 1.416

6.368 ± 1.291

8.104 ± 0.489

6.657 ± 0.341

1.592 ± 0.539

3.329 ± 0.527
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski