Antricoccus suffuscus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Geodermatophilales; Antricoccaceae; Antricoccus

Average proteome isoelectric point is 6.15

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4340 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2T1A0B2|A0A2T1A0B2_9ACTN Stearoyl-CoA desaturase (Delta-9 desaturase) OS=Antricoccus suffuscus OX=1629062 GN=CLV47_10753 PE=4 SV=1
MM1 pKa = 7.67AAPITFDD8 pKa = 3.54SLVGYY13 pKa = 10.49AIANPLAICEE23 pKa = 4.45SVLVANPVEE32 pKa = 4.51VEE34 pKa = 3.65ALGAVFRR41 pKa = 11.84AAGASTAEE49 pKa = 4.2SAMCALEE56 pKa = 4.03AAQLADD62 pKa = 3.8AAGMIDD68 pKa = 5.29DD69 pKa = 4.32KK70 pKa = 11.66TPVQLMAEE78 pKa = 4.29VTATKK83 pKa = 9.29DD84 pKa = 3.36TLDD87 pKa = 3.66VNSAQLDD94 pKa = 4.4LIGGLLSEE102 pKa = 4.88VGSQIHH108 pKa = 6.7LVQAKK113 pKa = 10.09LNSLLDD119 pKa = 3.38MMYY122 pKa = 11.19AEE124 pKa = 4.96IATAASMYY132 pKa = 9.64EE133 pKa = 4.12CAVPYY138 pKa = 10.72DD139 pKa = 4.02PANDD143 pKa = 3.8AALHH147 pKa = 5.22EE148 pKa = 4.49QCAQAALASINTTATSVNAVVDD170 pKa = 4.62GYY172 pKa = 11.42DD173 pKa = 4.06AFLTDD178 pKa = 5.21HH179 pKa = 7.24LATLQEE185 pKa = 4.65DD186 pKa = 4.2YY187 pKa = 11.31GYY189 pKa = 11.14VPPAALNDD197 pKa = 3.94GAALGNDD204 pKa = 3.72PAYY207 pKa = 11.1VSLTTGMPGASAPPGQVQQWWNEE230 pKa = 3.15RR231 pKa = 11.84SAAEE235 pKa = 4.23KK236 pKa = 10.51VWLIDD241 pKa = 3.5NEE243 pKa = 4.38GAALSMMHH251 pKa = 7.02GLPALVLNLVNRR263 pKa = 11.84RR264 pKa = 11.84EE265 pKa = 4.23LTDD268 pKa = 3.96DD269 pKa = 3.88ASSIDD274 pKa = 3.52AQVAMVEE281 pKa = 4.31TQKK284 pKa = 11.42ASLMQILGVSVASDD298 pKa = 3.62VFDD301 pKa = 4.51HH302 pKa = 7.09PDD304 pKa = 2.87IRR306 pKa = 11.84ASNPGAADD314 pKa = 3.43EE315 pKa = 4.43LAGVLPVLAALKK327 pKa = 10.04VKK329 pKa = 9.75QANIHH334 pKa = 4.96GVEE337 pKa = 4.53DD338 pKa = 3.87GAKK341 pKa = 9.31AVAMADD347 pKa = 3.16GTAIKK352 pKa = 9.52TYY354 pKa = 10.84LLDD357 pKa = 4.1YY358 pKa = 10.85DD359 pKa = 4.89DD360 pKa = 6.02LGSADD365 pKa = 4.44DD366 pKa = 4.45GEE368 pKa = 4.37AVIAIGNPDD377 pKa = 3.73EE378 pKa = 4.58AADD381 pKa = 3.51IAVIVPGTTSSARR394 pKa = 11.84TMSDD398 pKa = 3.42YY399 pKa = 11.3VGSGGNLYY407 pKa = 11.06AEE409 pKa = 4.76MNDD412 pKa = 3.33VDD414 pKa = 4.51PDD416 pKa = 3.92SKK418 pKa = 11.2KK419 pKa = 11.11SVIAYY424 pKa = 10.26LGMDD428 pKa = 4.48APDD431 pKa = 4.07TLPDD435 pKa = 3.6ASLPIYY441 pKa = 10.63ANEE444 pKa = 4.22AAPEE448 pKa = 4.01LAADD452 pKa = 3.28IAGYY456 pKa = 8.28TEE458 pKa = 4.61SNLVATGADD467 pKa = 3.25PHH469 pKa = 5.75VTVIGHH475 pKa = 6.06SYY477 pKa = 10.38GSLVVGAALEE487 pKa = 4.43SGDD490 pKa = 5.48LIADD494 pKa = 3.55DD495 pKa = 4.98VIFVGSPGVGVKK507 pKa = 10.36NVDD510 pKa = 3.96EE511 pKa = 4.91LNMDD515 pKa = 3.97GSHH518 pKa = 6.33VYY520 pKa = 10.54VGLLPDD526 pKa = 4.72DD527 pKa = 5.54AISNANDD534 pKa = 3.4FFDD537 pKa = 3.87MKK539 pKa = 10.71AGSTLGVPDD548 pKa = 4.4GAWFGHH554 pKa = 5.37NPARR558 pKa = 11.84EE559 pKa = 4.33SFGGTVFDD567 pKa = 4.3TDD569 pKa = 3.09TDD571 pKa = 4.17GDD573 pKa = 3.74HH574 pKa = 7.3GDD576 pKa = 3.64YY577 pKa = 10.62FDD579 pKa = 5.36YY580 pKa = 9.1GTTQLDD586 pKa = 3.24NMAAVATGQYY596 pKa = 11.15DD597 pKa = 4.32EE598 pKa = 4.66VTLDD602 pKa = 3.21

Molecular weight: 62.15 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2T0ZRV4|A0A2T0ZRV4_9ACTN o-succinylbenzoate synthase OS=Antricoccus suffuscus OX=1629062 GN=menC PE=3 SV=1
MM1 pKa = 7.4GSVIKK6 pKa = 10.42KK7 pKa = 8.47RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.22RR11 pKa = 11.84MAKK14 pKa = 9.41KK15 pKa = 9.99KK16 pKa = 9.72HH17 pKa = 5.74RR18 pKa = 11.84KK19 pKa = 7.77LLKK22 pKa = 8.07RR23 pKa = 11.84TRR25 pKa = 11.84VQRR28 pKa = 11.84RR29 pKa = 11.84NKK31 pKa = 9.81KK32 pKa = 9.63

Molecular weight: 4.05 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4340

0

4340

1423240

26

3336

327.9

35.22

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.431 ± 0.039

0.768 ± 0.01

6.374 ± 0.031

5.253 ± 0.036

2.955 ± 0.022

8.846 ± 0.035

2.103 ± 0.017

4.906 ± 0.026

2.802 ± 0.028

9.636 ± 0.041

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.146 ± 0.014

2.294 ± 0.018

5.374 ± 0.026

3.065 ± 0.02

6.822 ± 0.041

5.995 ± 0.029

6.152 ± 0.028

8.48 ± 0.03

1.36 ± 0.015

2.239 ± 0.019
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski