Capybara microvirus Cap1_SP_59

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.79

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W3W8|A0A4P8W3W8_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_59 OX=2584784 PE=4 SV=1
MM1 pKa = 6.83NTNLRR6 pKa = 11.84KK7 pKa = 9.36IRR9 pKa = 11.84CNFNPIVEE17 pKa = 4.11VRR19 pKa = 11.84PVKK22 pKa = 10.32IGEE25 pKa = 4.81DD26 pKa = 2.88IDD28 pKa = 3.6IRR30 pKa = 11.84FVDD33 pKa = 5.34PSASDD38 pKa = 3.85LPSPDD43 pKa = 2.94SMRR46 pKa = 11.84LEE48 pKa = 4.31RR49 pKa = 11.84LLSAGYY55 pKa = 10.03RR56 pKa = 11.84PEE58 pKa = 4.09QVSPAFMTPTAAHH71 pKa = 6.04TLEE74 pKa = 5.17DD75 pKa = 3.77MAEE78 pKa = 4.03SAINSIVEE86 pKa = 3.87TSNNQEE92 pKa = 3.91SS93 pKa = 3.55

Molecular weight: 10.35 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W3S1|A0A4P8W3S1_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_59 OX=2584784 PE=4 SV=1
MM1 pKa = 7.85CISKK5 pKa = 10.28IGIRR9 pKa = 11.84SKK11 pKa = 11.19DD12 pKa = 3.46LVYY15 pKa = 11.03NQYY18 pKa = 8.95TPAFRR23 pKa = 11.84SVPCGICPQCLNTKK37 pKa = 9.54RR38 pKa = 11.84NNMYY42 pKa = 9.92IRR44 pKa = 11.84SFFEE48 pKa = 3.74WQHH51 pKa = 4.42TLKK54 pKa = 10.92EE55 pKa = 4.28GGFVLFPTYY64 pKa = 10.08TFQDD68 pKa = 2.76SDD70 pKa = 3.87LPYY73 pKa = 10.43FDD75 pKa = 4.77MRR77 pKa = 11.84DD78 pKa = 3.49GSLHH82 pKa = 6.88RR83 pKa = 11.84GVQDD87 pKa = 3.46SYY89 pKa = 11.94HH90 pKa = 7.36LDD92 pKa = 4.38DD93 pKa = 5.34YY94 pKa = 11.4ICPCFDD100 pKa = 3.54FSDD103 pKa = 3.29IRR105 pKa = 11.84GTKK108 pKa = 10.26GIVKK112 pKa = 10.25AIRR115 pKa = 11.84SHH117 pKa = 7.14ARR119 pKa = 11.84DD120 pKa = 3.1VWNVVGVKK128 pKa = 9.88YY129 pKa = 8.74VVCPEE134 pKa = 4.03YY135 pKa = 11.12GPTPNKK141 pKa = 6.35THH143 pKa = 7.06RR144 pKa = 11.84PHH146 pKa = 6.15FHH148 pKa = 7.15CLFFCPPSPLGSLDD162 pKa = 3.68GDD164 pKa = 3.53LQRR167 pKa = 11.84RR168 pKa = 11.84YY169 pKa = 10.0KK170 pKa = 11.14DD171 pKa = 4.06DD172 pKa = 3.41MAKK175 pKa = 10.38FCLKK179 pKa = 9.95VWSEE183 pKa = 4.24RR184 pKa = 11.84KK185 pKa = 9.18GHH187 pKa = 5.44GTASYY192 pKa = 9.77SKK194 pKa = 10.33KK195 pKa = 9.58YY196 pKa = 10.87GPFIEE201 pKa = 4.33SFKK204 pKa = 9.83GIKK207 pKa = 9.31YY208 pKa = 9.41ASKK211 pKa = 11.05YY212 pKa = 4.71MTKK215 pKa = 10.57DD216 pKa = 3.42VVDD219 pKa = 3.96LCEE222 pKa = 3.95NCPRR226 pKa = 11.84LKK228 pKa = 10.63KK229 pKa = 10.12FLHH232 pKa = 6.52HH233 pKa = 5.91NTYY236 pKa = 10.72DD237 pKa = 3.56NKK239 pKa = 10.28VFLPDD244 pKa = 2.96NWQEE248 pKa = 3.7IPLYY252 pKa = 9.18EE253 pKa = 4.62LPYY256 pKa = 9.21QYY258 pKa = 10.24RR259 pKa = 11.84YY260 pKa = 10.24KK261 pKa = 10.55AIKK264 pKa = 9.74PFLPRR269 pKa = 11.84PLWCKK274 pKa = 10.55GFGEE278 pKa = 5.46SILQLLTDD286 pKa = 3.88STDD289 pKa = 3.41EE290 pKa = 3.96QLTDD294 pKa = 4.13LLVNGIKK301 pKa = 9.47IDD303 pKa = 3.84GDD305 pKa = 3.19ISLDD309 pKa = 3.54GKK311 pKa = 10.75QNTYY315 pKa = 10.49QIPRR319 pKa = 11.84YY320 pKa = 8.8IQQKK324 pKa = 6.86FTWHH328 pKa = 6.23TFDD331 pKa = 5.61GYY333 pKa = 11.06DD334 pKa = 3.1IYY336 pKa = 11.52NSRR339 pKa = 11.84LSRR342 pKa = 11.84ALRR345 pKa = 11.84NVYY348 pKa = 7.16EE349 pKa = 3.78QRR351 pKa = 11.84LNQKK355 pKa = 10.07SLLLRR360 pKa = 11.84NFFYY364 pKa = 10.96NSHH367 pKa = 6.9KK368 pKa = 10.8YY369 pKa = 7.1MHH371 pKa = 6.99IWNDD375 pKa = 3.07LHH377 pKa = 9.12SPFDD381 pKa = 4.19LKK383 pKa = 11.3DD384 pKa = 3.47LLSRR388 pKa = 11.84ISPTQLACYY397 pKa = 9.87SEE399 pKa = 4.26IMCTNFAKK407 pKa = 10.55SDD409 pKa = 3.78FEE411 pKa = 5.88DD412 pKa = 3.83INSLPFPDD420 pKa = 4.01VEE422 pKa = 4.36YY423 pKa = 11.37KK424 pKa = 10.91EE425 pKa = 4.19MTLKK429 pKa = 11.02YY430 pKa = 8.58MLDD433 pKa = 3.53RR434 pKa = 11.84IIYY437 pKa = 7.25HH438 pKa = 6.4KK439 pKa = 10.64PNIKK443 pKa = 10.07CLPHH447 pKa = 6.62LKK449 pKa = 10.7GLFKK453 pKa = 10.44PLEE456 pKa = 3.78AHH458 pKa = 6.63KK459 pKa = 10.29PYY461 pKa = 10.73INDD464 pKa = 3.36EE465 pKa = 4.2FSLLLHH471 pKa = 6.82FYY473 pKa = 9.39SKK475 pKa = 11.02CMQEE479 pKa = 4.67DD480 pKa = 4.02VNKK483 pKa = 10.13QLYY486 pKa = 9.37LRR488 pKa = 11.84RR489 pKa = 11.84KK490 pKa = 8.74KK491 pKa = 9.95RR492 pKa = 11.84HH493 pKa = 6.07HH494 pKa = 6.68DD495 pKa = 4.16AIVQAEE501 pKa = 4.46LLPTLIKK508 pKa = 10.76YY509 pKa = 9.28EE510 pKa = 4.18YY511 pKa = 10.82

Molecular weight: 60.46 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1687

93

695

421.8

48.17

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.343 ± 2.583

1.6 ± 0.624

6.461 ± 0.836

5.216 ± 1.096

5.039 ± 1.04

4.861 ± 0.233

2.134 ± 0.576

5.098 ± 0.369

6.52 ± 0.671

9.01 ± 0.634

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.253 ± 0.369

6.165 ± 0.873

4.149 ± 0.866

5.157 ± 1.406

4.505 ± 0.413

8.536 ± 1.107

5.75 ± 0.983

4.683 ± 0.88

0.948 ± 0.147

5.572 ± 0.818
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski