Torque teno felis virus (isolate Fc-TTV4)

Taxonomy: Viruses; Anelloviridae; Etatorquevirus; Torque teno felid virus 1; Torque teno felis virus

Average proteome isoelectric point is 6.03

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|Q8QVL5|ORF3_TTVF1 Uncharacterized ORF3 protein OS=Torque teno felis virus (isolate Fc-TTV4) OX=766188 GN=ORF3 PE=4 SV=1
MM1 pKa = 7.27SASHH5 pKa = 6.67SLSQSPNLHH14 pKa = 6.89PDD16 pKa = 3.81FTYY19 pKa = 10.66KK20 pKa = 10.34RR21 pKa = 11.84QEE23 pKa = 4.18ALWKK27 pKa = 9.26QLVSAEE33 pKa = 3.95HH34 pKa = 7.03RR35 pKa = 11.84KK36 pKa = 9.28FCSCGDD42 pKa = 3.63YY43 pKa = 9.33TQHH46 pKa = 6.32FRR48 pKa = 11.84FPSPVKK54 pKa = 9.57EE55 pKa = 4.22DD56 pKa = 2.98EE57 pKa = 4.7CIRR60 pKa = 11.84VVGEE64 pKa = 3.82EE65 pKa = 4.25GGDD68 pKa = 3.72GVAVSYY74 pKa = 10.81HH75 pKa = 4.19VTKK78 pKa = 10.74EE79 pKa = 4.17SGDD82 pKa = 3.69EE83 pKa = 4.02DD84 pKa = 4.32PEE86 pKa = 3.99EE87 pKa = 4.42VMASIAVGDD96 pKa = 4.93DD97 pKa = 3.43GDD99 pKa = 6.14DD100 pKa = 4.61DD101 pKa = 6.47LEE103 pKa = 4.36LCKK106 pKa = 10.3WNLKK110 pKa = 9.96PEE112 pKa = 4.06PLILKK117 pKa = 8.02QTDD120 pKa = 3.76PQPLLTSSPGISTVMGSSKK139 pKa = 9.17TRR141 pKa = 11.84LMNEE145 pKa = 3.71LLEE148 pKa = 4.96IIHH151 pKa = 6.57ALSGPDD157 pKa = 3.14PWEE160 pKa = 4.19SDD162 pKa = 2.93GGMGPQGEE170 pKa = 4.25PSKK173 pKa = 11.33SNSRR177 pKa = 11.84LLYY180 pKa = 10.22SDD182 pKa = 5.25PNPEE186 pKa = 4.77DD187 pKa = 3.66SSSDD191 pKa = 3.64DD192 pKa = 3.58SEE194 pKa = 3.9MSYY197 pKa = 10.96FSSSDD202 pKa = 3.3STDD205 pKa = 3.37ADD207 pKa = 2.88ITYY210 pKa = 10.2PNMEE214 pKa = 4.72GGRR217 pKa = 11.84TPPRR221 pKa = 11.84YY222 pKa = 8.86PPPNMGIYY230 pKa = 9.96FF231 pKa = 4.25

Molecular weight: 25.41 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|Q8QVL4|ORF2_TTVF1 Uncharacterized ORF2 protein OS=Torque teno felis virus (isolate Fc-TTV4) OX=766188 GN=ORF1 PE=4 SV=1
MM1 pKa = 6.26YY2 pKa = 9.92QSRR5 pKa = 11.84RR6 pKa = 11.84RR7 pKa = 11.84RR8 pKa = 11.84RR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84WGRR14 pKa = 11.84RR15 pKa = 11.84ILSRR19 pKa = 11.84YY20 pKa = 6.84KK21 pKa = 10.41RR22 pKa = 11.84KK23 pKa = 8.48WGRR26 pKa = 11.84RR27 pKa = 11.84SRR29 pKa = 11.84RR30 pKa = 11.84GHH32 pKa = 6.16GIYY35 pKa = 10.12RR36 pKa = 11.84RR37 pKa = 11.84WRR39 pKa = 11.84RR40 pKa = 11.84WRR42 pKa = 11.84RR43 pKa = 11.84RR44 pKa = 11.84PRR46 pKa = 11.84TVVTEE51 pKa = 3.7QHH53 pKa = 5.15SRR55 pKa = 11.84RR56 pKa = 11.84VKK58 pKa = 9.41TIIVRR63 pKa = 11.84GWEE66 pKa = 3.94PLGNICPTDD75 pKa = 3.53SARR78 pKa = 11.84AKK80 pKa = 7.68ATPYY84 pKa = 10.97ASYY87 pKa = 11.07DD88 pKa = 3.47SDD90 pKa = 3.65SGQGQWHH97 pKa = 5.87GTWGHH102 pKa = 5.63HH103 pKa = 4.66WFTFQSLVDD112 pKa = 3.63RR113 pKa = 11.84AEE115 pKa = 3.8ARR117 pKa = 11.84LNSFSGNWEE126 pKa = 3.92SYY128 pKa = 10.83DD129 pKa = 3.5YY130 pKa = 11.52LRR132 pKa = 11.84FLGGTMYY139 pKa = 10.77FMQPRR144 pKa = 11.84EE145 pKa = 3.87MCFMFGNDD153 pKa = 4.22PYY155 pKa = 11.86LMTSDD160 pKa = 4.11LDD162 pKa = 3.64KK163 pKa = 10.85TASQKK168 pKa = 10.16NRR170 pKa = 11.84AEE172 pKa = 4.35EE173 pKa = 3.9TWITPGYY180 pKa = 10.17LMHH183 pKa = 7.46RR184 pKa = 11.84PGTHH188 pKa = 7.51LILSRR193 pKa = 11.84QKK195 pKa = 9.31VEE197 pKa = 3.63RR198 pKa = 11.84RR199 pKa = 11.84SMYY202 pKa = 10.04KK203 pKa = 9.58IRR205 pKa = 11.84VPVPTSWRR213 pKa = 11.84GWFPIPDD220 pKa = 3.76CFSYY224 pKa = 10.51VLCHH228 pKa = 6.97WYY230 pKa = 6.88WTWWDD235 pKa = 3.35PDD237 pKa = 3.25ACFFDD242 pKa = 4.19PCATGSSCEE251 pKa = 3.99AEE253 pKa = 4.53PWWSTAQTKK262 pKa = 7.47QAWVDD267 pKa = 3.47RR268 pKa = 11.84TKK270 pKa = 11.23LDD272 pKa = 3.98DD273 pKa = 4.44PPVGGTGPNQKK284 pKa = 7.53TWAPFLPSRR293 pKa = 11.84PCTNYY298 pKa = 8.33YY299 pKa = 8.02THH301 pKa = 7.08SASFWFKK308 pKa = 11.17YY309 pKa = 9.82KK310 pKa = 10.85LKK312 pKa = 10.6FQVTGEE318 pKa = 4.46NIWAPVPRR326 pKa = 11.84DD327 pKa = 3.19YY328 pKa = 11.12SQRR331 pKa = 11.84GTVPTAPSRR340 pKa = 11.84QQVEE344 pKa = 4.39SEE346 pKa = 3.81ARR348 pKa = 11.84APYY351 pKa = 9.89PKK353 pKa = 9.83TNRR356 pKa = 11.84PPTTADD362 pKa = 3.45ILPGDD367 pKa = 4.5LDD369 pKa = 3.8SDD371 pKa = 4.78GILEE375 pKa = 4.3DD376 pKa = 3.44EE377 pKa = 4.57AYY379 pKa = 10.42EE380 pKa = 5.11RR381 pKa = 11.84ITRR384 pKa = 11.84DD385 pKa = 3.18NPCPKK390 pKa = 9.95RR391 pKa = 11.84PRR393 pKa = 11.84PLGIRR398 pKa = 11.84WWDD401 pKa = 3.46GTPGRR406 pKa = 11.84TLQEE410 pKa = 3.87QQQAAVLRR418 pKa = 11.84PKK420 pKa = 10.19PRR422 pKa = 11.84RR423 pKa = 11.84QLLRR427 pKa = 11.84RR428 pKa = 11.84LRR430 pKa = 11.84DD431 pKa = 3.28VLLQLL436 pKa = 4.64

Molecular weight: 51.7 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

772

105

436

257.3

29.61

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.793 ± 0.516

2.073 ± 0.21

7.254 ± 1.403

6.088 ± 1.79

3.238 ± 0.254

6.995 ± 0.436

2.591 ± 0.611

3.109 ± 0.311

4.145 ± 0.216

6.477 ± 0.348

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.332 ± 0.443

2.332 ± 0.383

8.29 ± 0.919

4.145 ± 0.514

8.938 ± 3.164

9.067 ± 2.022

5.829 ± 1.229

4.663 ± 1.05

3.756 ± 1.329

3.886 ± 0.395
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski