Erysipelothrix larvae

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix

Average proteome isoelectric point is 6.03

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2225 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0X8GZ37|A0A0X8GZ37_9FIRM Polyprenyl glycosylphosphotransferase OS=Erysipelothrix larvae OX=1514105 GN=AOC36_02510 PE=3 SV=1
MM1 pKa = 7.67LLLLLIITGCAQSNPSTDD19 pKa = 2.88ATGFLCEE26 pKa = 4.09KK27 pKa = 9.98QDD29 pKa = 3.67YY30 pKa = 10.51GLVEE34 pKa = 4.26VRR36 pKa = 11.84EE37 pKa = 4.9LILDD41 pKa = 3.47SDD43 pKa = 4.1GTIKK47 pKa = 10.86KK48 pKa = 10.1LISTSRR54 pKa = 11.84IEE56 pKa = 4.16FDD58 pKa = 3.24ASQSADD64 pKa = 3.4VTIEE68 pKa = 4.09DD69 pKa = 3.73YY70 pKa = 11.81QMFLAQLYY78 pKa = 8.9EE79 pKa = 4.37SLVSQDD85 pKa = 4.32DD86 pKa = 4.63GINYY90 pKa = 9.78SSQIIEE96 pKa = 4.51NIIEE100 pKa = 4.28VIMTFDD106 pKa = 3.46MVQISDD112 pKa = 3.93STLVWLGLPIEE123 pKa = 4.33NTQNRR128 pKa = 11.84IIVEE132 pKa = 3.8QYY134 pKa = 10.53IDD136 pKa = 3.57NLEE139 pKa = 4.37SNGYY143 pKa = 6.99QCKK146 pKa = 7.66TTTATLGG153 pKa = 3.4

Molecular weight: 17.07 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A109UHS8|A0A109UHS8_9FIRM Uncharacterized protein OS=Erysipelothrix larvae OX=1514105 GN=AOC36_11715 PE=4 SV=1
MM1 pKa = 7.29NFAPIFGLIALSMMFFVIGSLRR23 pKa = 11.84NINVLFGLKK32 pKa = 10.25AILNQSVVVAIVATGAIFIYY52 pKa = 10.62SLGSFDD58 pKa = 3.66ISLGASVTVSALLGAITFNATNSILLMFLVCILVAVSIALFNSVLASIFNLPVFVTTIAMLSVLNAIVLLLISVNGTGSTVSISASSVQNLNTEE152 pKa = 3.98WFKK155 pKa = 10.98IATLMVFAGLCTFLFNFTRR174 pKa = 11.84LGRR177 pKa = 11.84MQKK180 pKa = 10.49FIGGNPICARR190 pKa = 11.84LTGISSKK197 pKa = 10.33KK198 pKa = 9.7ISIISFALSGLGVGIGAFLLIVYY221 pKa = 10.05APTLTRR227 pKa = 11.84NSASSVGMDD236 pKa = 3.32VIIAIVFGGMPISGGARR253 pKa = 11.84SKK255 pKa = 10.38IYY257 pKa = 10.37SAIVGSFSMTFLSQIMVMFNMNSGINQIVKK287 pKa = 10.48AIIFILVVYY296 pKa = 9.84LATSNQRR303 pKa = 11.84RR304 pKa = 11.84KK305 pKa = 9.85ILPRR309 pKa = 4.54

Molecular weight: 32.73 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2225

0

2225

709240

46

4515

318.8

35.88

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.125 ± 0.045

0.908 ± 0.018

6.025 ± 0.043

6.435 ± 0.057

4.599 ± 0.037

6.298 ± 0.05

2.213 ± 0.026

8.259 ± 0.05

6.246 ± 0.047

9.572 ± 0.058

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.75 ± 0.029

5.114 ± 0.043

3.159 ± 0.032

3.54 ± 0.03

3.913 ± 0.042

6.672 ± 0.046

5.938 ± 0.076

7.357 ± 0.05

0.794 ± 0.018

4.084 ± 0.037
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski