Rinderpest morbillivirus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus

Average proteome isoelectric point is 6.69

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0H5BN48|A0A0H5BN48_9MONO RNA-directed RNA polymerase L OS=Rinderpest morbillivirus OX=11241 GN=L PE=3 SV=1
MM1 pKa = 7.87ASLLKK6 pKa = 10.78SLALFKK12 pKa = 10.79KK13 pKa = 10.55NKK15 pKa = 9.77DD16 pKa = 3.72KK17 pKa = 11.19PPLAAGSGGAIRR29 pKa = 11.84GIKK32 pKa = 9.67HH33 pKa = 4.91VVIVPIPGDD42 pKa = 3.45SSITTRR48 pKa = 11.84SRR50 pKa = 11.84LLDD53 pKa = 3.8CLVKK57 pKa = 10.26MVGDD61 pKa = 4.29PDD63 pKa = 3.28ISGPKK68 pKa = 8.56LTGALISILSLFVEE82 pKa = 4.97SPGQLIQRR90 pKa = 11.84ITDD93 pKa = 3.95DD94 pKa = 3.86PDD96 pKa = 3.35ISIKK100 pKa = 10.5LVEE103 pKa = 4.51VVQSDD108 pKa = 3.6KK109 pKa = 10.51TQSGLTFASRR119 pKa = 11.84GASMDD124 pKa = 4.08DD125 pKa = 3.13EE126 pKa = 5.21ADD128 pKa = 3.54RR129 pKa = 11.84YY130 pKa = 8.44FTYY133 pKa = 10.53DD134 pKa = 3.23EE135 pKa = 4.83PNGGEE140 pKa = 3.99EE141 pKa = 3.93RR142 pKa = 11.84QSYY145 pKa = 7.97WFEE148 pKa = 3.59NRR150 pKa = 11.84EE151 pKa = 3.84IQDD154 pKa = 3.55IEE156 pKa = 4.3VQDD159 pKa = 3.84PEE161 pKa = 4.65GFNMILATILAQIWILLAKK180 pKa = 10.35AVTTPDD186 pKa = 3.1TAADD190 pKa = 3.58SEE192 pKa = 4.07LRR194 pKa = 11.84RR195 pKa = 11.84WVKK198 pKa = 8.71YY199 pKa = 5.31TQQRR203 pKa = 11.84RR204 pKa = 11.84VIGEE208 pKa = 3.69FRR210 pKa = 11.84LDD212 pKa = 3.82KK213 pKa = 11.05GWLDD217 pKa = 3.56TVRR220 pKa = 11.84NRR222 pKa = 11.84IAEE225 pKa = 4.26DD226 pKa = 3.22LSLRR230 pKa = 11.84RR231 pKa = 11.84FMVALILDD239 pKa = 4.4IKK241 pKa = 9.43RR242 pKa = 11.84TPGNKK247 pKa = 8.91PRR249 pKa = 11.84IAEE252 pKa = 4.48MICDD256 pKa = 3.34IDD258 pKa = 3.96TYY260 pKa = 10.84IVEE263 pKa = 4.69AGLASFILTIKK274 pKa = 10.64FGIEE278 pKa = 3.56TMYY281 pKa = 10.26PALGLHH287 pKa = 6.29EE288 pKa = 4.47FAGEE292 pKa = 4.11LSTIEE297 pKa = 4.35SLMNLYY303 pKa = 9.91QQMGEE308 pKa = 4.06LAPYY312 pKa = 9.25MVILEE317 pKa = 4.19NSIQNKK323 pKa = 9.08FSAGAYY329 pKa = 7.48PLLWSYY335 pKa = 12.09AMGVGVEE342 pKa = 4.94LEE344 pKa = 4.14SSMGGLNFGRR354 pKa = 11.84SYY356 pKa = 11.19FDD358 pKa = 3.04PAYY361 pKa = 10.4FRR363 pKa = 11.84LGQEE367 pKa = 3.88MVRR370 pKa = 11.84RR371 pKa = 11.84SAGKK375 pKa = 9.88VSSNLASEE383 pKa = 4.65LGITEE388 pKa = 4.25EE389 pKa = 4.02EE390 pKa = 3.97AKK392 pKa = 10.57LVSEE396 pKa = 4.48IAAYY400 pKa = 9.24TGDD403 pKa = 3.9DD404 pKa = 3.6RR405 pKa = 11.84NSRR408 pKa = 11.84TSGPKK413 pKa = 7.44QTQVSFLRR421 pKa = 11.84TDD423 pKa = 3.05QGGEE427 pKa = 3.85IQHH430 pKa = 6.17NASKK434 pKa = 10.52KK435 pKa = 10.04DD436 pKa = 3.57EE437 pKa = 4.14ARR439 pKa = 11.84VPQVRR444 pKa = 11.84KK445 pKa = 7.92EE446 pKa = 4.05TWASSRR452 pKa = 11.84LDD454 pKa = 3.4RR455 pKa = 11.84YY456 pKa = 10.79KK457 pKa = 11.05EE458 pKa = 3.97DD459 pKa = 3.65TDD461 pKa = 3.91NEE463 pKa = 4.3AVSPSVKK470 pKa = 9.93TLIDD474 pKa = 3.24VDD476 pKa = 4.11TTPEE480 pKa = 4.29GDD482 pKa = 3.59TDD484 pKa = 4.05PLGSKK489 pKa = 10.16KK490 pKa = 10.31SAEE493 pKa = 4.69AILKK497 pKa = 7.94LQAMASILGDD507 pKa = 3.46STLGNDD513 pKa = 4.77SPRR516 pKa = 11.84TYY518 pKa = 10.98NDD520 pKa = 3.51KK521 pKa = 11.24DD522 pKa = 3.73LLSS525 pKa = 3.86

Molecular weight: 57.99 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0H5B5J8|A0A0H5B5J8_9MONO Hemagglutinin glycoprotein OS=Rinderpest morbillivirus OX=11241 GN=H PE=3 SV=1
MM1 pKa = 8.04AEE3 pKa = 4.59IYY5 pKa = 10.89DD6 pKa = 3.97FDD8 pKa = 4.53KK9 pKa = 11.39SSWDD13 pKa = 3.5VKK15 pKa = 11.09GSIAPIRR22 pKa = 11.84PTTYY26 pKa = 10.35NDD28 pKa = 2.86GRR30 pKa = 11.84LIPQVRR36 pKa = 11.84VIDD39 pKa = 4.23PGLGDD44 pKa = 4.23RR45 pKa = 11.84KK46 pKa = 10.47DD47 pKa = 3.46EE48 pKa = 4.05CFMYY52 pKa = 10.31IFLLGIVEE60 pKa = 4.84DD61 pKa = 4.71SDD63 pKa = 4.01PLSPPRR69 pKa = 11.84GRR71 pKa = 11.84TFGSLPLGVGKK82 pKa = 8.51STAKK86 pKa = 10.45PEE88 pKa = 4.09EE89 pKa = 4.1LLKK92 pKa = 10.8EE93 pKa = 4.18ATDD96 pKa = 3.72LDD98 pKa = 3.63IVVRR102 pKa = 11.84RR103 pKa = 11.84TAGLNEE109 pKa = 3.91KK110 pKa = 10.39LVFYY114 pKa = 11.06NNTPLSLLTPWKK126 pKa = 10.42KK127 pKa = 10.27ILTKK131 pKa = 10.83GSVFSANQVCSAVNLIPLDD150 pKa = 3.51TPQRR154 pKa = 11.84FRR156 pKa = 11.84VVYY159 pKa = 9.03MSITRR164 pKa = 11.84LSDD167 pKa = 3.2SGCYY171 pKa = 8.94NVPRR175 pKa = 11.84KK176 pKa = 8.81MLEE179 pKa = 3.85FRR181 pKa = 11.84SANAMAFNLLVTLKK195 pKa = 9.77IDD197 pKa = 3.35TGTEE201 pKa = 3.6PGRR204 pKa = 11.84PEE206 pKa = 3.8VGAVGLSEE214 pKa = 4.15ATFMVHH220 pKa = 6.08IGNFRR225 pKa = 11.84RR226 pKa = 11.84KK227 pKa = 9.89KK228 pKa = 9.91NEE230 pKa = 3.86AYY232 pKa = 10.46SADD235 pKa = 3.68YY236 pKa = 11.12CKK238 pKa = 10.39MKK240 pKa = 10.01IEE242 pKa = 4.25KK243 pKa = 9.11MGLVFALGGIGGTSLHH259 pKa = 6.26IRR261 pKa = 11.84STGKK265 pKa = 9.26MSKK268 pKa = 8.35TLHH271 pKa = 5.95AQLGFKK277 pKa = 9.06KK278 pKa = 8.43TLCYY282 pKa = 10.37PLMDD286 pKa = 4.35INEE289 pKa = 4.46DD290 pKa = 3.64LNRR293 pKa = 11.84LLWRR297 pKa = 11.84SKK299 pKa = 10.71CKK301 pKa = 9.75IVRR304 pKa = 11.84IQAVIQPSVPQEE316 pKa = 3.3FRR318 pKa = 11.84IYY320 pKa = 11.01DD321 pKa = 3.56DD322 pKa = 5.15VIINDD327 pKa = 3.69DD328 pKa = 3.35QGLFKK333 pKa = 11.11VLL335 pKa = 3.52

Molecular weight: 37.46 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

4705

335

2183

784.2

87.34

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.1 ± 0.497

1.679 ± 0.225

5.845 ± 0.487

5.292 ± 0.329

3.103 ± 0.487

6.652 ± 0.724

2.232 ± 0.51

7.736 ± 0.219

5.547 ± 0.435

10.797 ± 0.633

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.147 ± 0.148

3.953 ± 0.264

4.612 ± 0.465

3.337 ± 0.195

5.59 ± 0.453

8.714 ± 0.526

6.015 ± 0.247

6.036 ± 0.226

1.02 ± 0.09

3.592 ± 0.496
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski