Capybara microvirus Cap1_SP_106

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.66

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W7Q1|A0A4P8W7Q1_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_106 OX=2584804 PE=4 SV=1
MM1 pKa = 7.38VNRR4 pKa = 11.84LYY6 pKa = 10.74TFYY9 pKa = 11.32NKK11 pKa = 10.56ASLRR15 pKa = 11.84YY16 pKa = 9.4GDD18 pKa = 4.07VFCYY22 pKa = 8.61PTDD25 pKa = 3.75SFCVARR31 pKa = 11.84LKK33 pKa = 10.94EE34 pKa = 4.09MSGKK38 pKa = 9.68IDD40 pKa = 3.72FNEE43 pKa = 3.78VDD45 pKa = 3.93VCCVGTIDD53 pKa = 4.2IEE55 pKa = 4.36SGIISGFPPVRR66 pKa = 11.84VPVSIDD72 pKa = 3.18TSIDD76 pKa = 3.76SQCSNSS82 pKa = 3.26

Molecular weight: 9.09 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W4E3|A0A4P8W4E3_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_106 OX=2584804 PE=4 SV=1
MM1 pKa = 7.39SCVKK5 pKa = 10.2PLFRR9 pKa = 11.84KK10 pKa = 9.87DD11 pKa = 3.57YY12 pKa = 10.05KK13 pKa = 10.89GLYY16 pKa = 9.26VPIPCGYY23 pKa = 10.69CMSCRR28 pKa = 11.84LRR30 pKa = 11.84RR31 pKa = 11.84SQDD34 pKa = 2.8LSFTMNVNLEE44 pKa = 3.94TAYY47 pKa = 10.09KK48 pKa = 9.64KK49 pKa = 10.58GASASFVTLTYY60 pKa = 9.96SEE62 pKa = 4.28RR63 pKa = 11.84HH64 pKa = 4.8VPRR67 pKa = 11.84TDD69 pKa = 3.24GNPLPRR75 pKa = 11.84KK76 pKa = 9.51SKK78 pKa = 10.91APSLPPAPLVGSAPQGLEE96 pKa = 3.77TLRR99 pKa = 11.84KK100 pKa = 9.46KK101 pKa = 10.53DD102 pKa = 3.39LQDD105 pKa = 3.09FFKK108 pKa = 10.86RR109 pKa = 11.84LRR111 pKa = 11.84KK112 pKa = 9.51RR113 pKa = 11.84LASDD117 pKa = 4.63GYY119 pKa = 11.66SNIKK123 pKa = 10.08YY124 pKa = 8.69LACGEE129 pKa = 4.27YY130 pKa = 10.65GDD132 pKa = 4.06KK133 pKa = 10.77EE134 pKa = 4.42KK135 pKa = 11.61YY136 pKa = 10.09NGGLGRR142 pKa = 11.84PHH144 pKa = 5.47YY145 pKa = 10.17HH146 pKa = 6.76IGIIGIDD153 pKa = 3.59KK154 pKa = 10.8SYY156 pKa = 11.36LDD158 pKa = 4.2TVLSDD163 pKa = 2.83LWIFGTYY170 pKa = 10.22DD171 pKa = 3.35VGVLKK176 pKa = 10.79QGGFNYY182 pKa = 7.63ITKK185 pKa = 9.57YY186 pKa = 9.89FSKK189 pKa = 10.48GVLGITSNTVYY200 pKa = 10.78LDD202 pKa = 3.58RR203 pKa = 11.84GLEE206 pKa = 3.81RR207 pKa = 11.84PFIVRR212 pKa = 11.84SQHH215 pKa = 7.04LCDD218 pKa = 3.91DD219 pKa = 4.24WLRR222 pKa = 11.84SNSHH226 pKa = 5.56QVMKK230 pKa = 10.76NYY232 pKa = 10.16TYY234 pKa = 10.78INNGKK239 pKa = 8.89EE240 pKa = 4.1VPIPSYY246 pKa = 10.52IRR248 pKa = 11.84RR249 pKa = 11.84QLDD252 pKa = 2.87IDD254 pKa = 3.72SHH256 pKa = 5.93YY257 pKa = 11.28KK258 pKa = 10.05PDD260 pKa = 3.86FSGLFAEE267 pKa = 4.68AKK269 pKa = 9.73KK270 pKa = 10.48RR271 pKa = 11.84HH272 pKa = 6.01LRR274 pKa = 11.84LADD277 pKa = 3.3TRR279 pKa = 11.84DD280 pKa = 3.44YY281 pKa = 11.71LSFIKK286 pKa = 10.6NYY288 pKa = 10.22EE289 pKa = 4.16CTLKK293 pKa = 10.71NIKK296 pKa = 10.04SAMPVEE302 pKa = 4.91DD303 pKa = 3.2VTLNLKK309 pKa = 10.72SPVLPAKK316 pKa = 10.15YY317 pKa = 9.8DD318 pKa = 3.45EE319 pKa = 5.33KK320 pKa = 10.93IALKK324 pKa = 10.48YY325 pKa = 9.71YY326 pKa = 10.55EE327 pKa = 5.13KK328 pKa = 10.64INLKK332 pKa = 9.88IVSSLGYY339 pKa = 9.67SPEE342 pKa = 3.96VVDD345 pKa = 4.79FLEE348 pKa = 4.21NKK350 pKa = 9.42KK351 pKa = 10.62LCEE354 pKa = 4.35LYY356 pKa = 10.93VSIVSQPKK364 pKa = 9.59LISWSEE370 pKa = 3.52AAQLLDD376 pKa = 3.72YY377 pKa = 11.07PPFF380 pKa = 5.33

Molecular weight: 43.41 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1626

82

580

271.0

30.49

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.289 ± 0.929

1.784 ± 0.548

7.38 ± 0.446

4.428 ± 0.471

4.736 ± 0.705

6.212 ± 0.265

1.23 ± 0.183

5.597 ± 0.506

6.027 ± 1.153

8.18 ± 0.921

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.784 ± 0.316

5.535 ± 0.375

4.244 ± 0.767

4.305 ± 1.287

4.613 ± 0.514

11.562 ± 0.791

4.182 ± 0.378

6.15 ± 0.963

0.861 ± 0.244

5.904 ± 0.646
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski