Taiyuan leafhopper virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Jingchuvirales; Aliusviridae; Ollusvirus; Ollusvirus taiyuanense

Average proteome isoelectric point is 6.5

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A455LU23|A0A455LU23_9VIRU Large structural protein OS=Taiyuan leafhopper virus OX=2482723 PE=4 SV=1
MM1 pKa = 7.61ARR3 pKa = 11.84QYY5 pKa = 11.58LNAARR10 pKa = 11.84GRR12 pKa = 11.84DD13 pKa = 3.37AGVSQLIAQLNQAVSEE29 pKa = 4.16RR30 pKa = 11.84SEE32 pKa = 4.36DD33 pKa = 3.49LTPITLVAGGDD44 pKa = 3.85NIRR47 pKa = 11.84DD48 pKa = 3.59FAVAAVSGQPLDD60 pKa = 3.22IRR62 pKa = 11.84ARR64 pKa = 11.84VPLAYY69 pKa = 9.72KK70 pKa = 10.32LATYY74 pKa = 10.07FNSRR78 pKa = 11.84LSNPTPDD85 pKa = 3.5FLQARR90 pKa = 11.84LWGDD94 pKa = 3.14LHH96 pKa = 6.96AVWFVGEE103 pKa = 4.28GTNDD107 pKa = 3.26QRR109 pKa = 11.84ISANARR115 pKa = 11.84LDD117 pKa = 3.83SILIANPIEE126 pKa = 4.48GPMMLQAFQKK136 pKa = 10.79VYY138 pKa = 9.62DD139 pKa = 3.91TVRR142 pKa = 11.84AAEE145 pKa = 4.24GAGNIPWDD153 pKa = 3.72EE154 pKa = 4.06ASAVVPLAPDD164 pKa = 3.56AQDD167 pKa = 4.18LPNEE171 pKa = 4.32FPLQKK176 pKa = 10.46YY177 pKa = 8.78RR178 pKa = 11.84FFEE181 pKa = 4.49ASAHH185 pKa = 6.06AFDD188 pKa = 4.02NTALVQVTAATQDD201 pKa = 3.29ALASLRR207 pKa = 11.84EE208 pKa = 4.09INEE211 pKa = 3.89NAVNVPPHH219 pKa = 6.19NFVLNEE225 pKa = 3.85AWPQNWARR233 pKa = 11.84LSRR236 pKa = 11.84ASRR239 pKa = 11.84LACFEE244 pKa = 4.12MLYY247 pKa = 8.74HH248 pKa = 5.78TNKK251 pKa = 9.82VEE253 pKa = 3.68WDD255 pKa = 3.71SYY257 pKa = 11.2LVASVAGVVFSICKK271 pKa = 9.41SSGMTTAYY279 pKa = 10.49LQTRR283 pKa = 11.84VDD285 pKa = 4.45RR286 pKa = 11.84LVKK289 pKa = 10.25DD290 pKa = 3.78YY291 pKa = 11.39PEE293 pKa = 6.44LEE295 pKa = 4.32LQDD298 pKa = 3.96KK299 pKa = 11.22LMMEE303 pKa = 4.85FFMTFGKK310 pKa = 10.64LYY312 pKa = 10.69VPQNLDD318 pKa = 3.06RR319 pKa = 11.84TVIANYY325 pKa = 9.33LQAVYY330 pKa = 10.52GCLEE334 pKa = 4.34EE335 pKa = 5.06GPSRR339 pKa = 11.84SIAWVIEE346 pKa = 3.65QARR349 pKa = 11.84GHH351 pKa = 6.44NYY353 pKa = 7.61THH355 pKa = 7.26ALAFAEE361 pKa = 4.67SCSKK365 pKa = 9.83TKK367 pKa = 10.45YY368 pKa = 10.67LPIAYY373 pKa = 8.76LANIRR378 pKa = 11.84EE379 pKa = 4.27DD380 pKa = 3.14QWIGFIKK387 pKa = 10.25VCYY390 pKa = 9.23HH391 pKa = 5.58VCRR394 pKa = 11.84DD395 pKa = 3.35PWGSLTGPAIPANNYY410 pKa = 9.47PDD412 pKa = 3.47IANIGAIMSKK422 pKa = 10.58KK423 pKa = 9.63LDD425 pKa = 3.4KK426 pKa = 10.69AARR429 pKa = 11.84GYY431 pKa = 10.53AGKK434 pKa = 10.34FILGGEE440 pKa = 4.17HH441 pKa = 6.57TEE443 pKa = 4.23PFCKK447 pKa = 10.08AVADD451 pKa = 4.21QIIEE455 pKa = 4.03SHH457 pKa = 6.09AASLEE462 pKa = 4.29DD463 pKa = 4.02EE464 pKa = 4.79LSAANIIAALFPGIKK479 pKa = 8.75MAVVGDD485 pKa = 3.29NAYY488 pKa = 10.83YY489 pKa = 10.31YY490 pKa = 10.41DD491 pKa = 4.11EE492 pKa = 5.22SGLPLEE498 pKa = 4.7LTAEE502 pKa = 4.27NARR505 pKa = 11.84PVGGWEE511 pKa = 4.15EE512 pKa = 4.23EE513 pKa = 4.38EE514 pKa = 4.47EE515 pKa = 4.11PAPAAGAAARR525 pKa = 11.84PAAGFPGNVNRR536 pKa = 11.84EE537 pKa = 3.42VAYY540 pKa = 10.5RR541 pKa = 11.84GEE543 pKa = 4.1QPLPQIAEE551 pKa = 4.07DD552 pKa = 3.68ALAEE556 pKa = 5.04SRR558 pKa = 11.84ATWANKK564 pKa = 9.43AKK566 pKa = 10.21NLPRR570 pKa = 11.84NAVKK574 pKa = 8.09MTMKK578 pKa = 10.65DD579 pKa = 3.2QVLLLEE585 pKa = 4.97EE586 pKa = 4.47YY587 pKa = 11.13VDD589 pKa = 3.96TDD591 pKa = 3.21RR592 pKa = 11.84HH593 pKa = 5.34LSAIKK598 pKa = 9.11TCCNLLLYY606 pKa = 10.45ASKK609 pKa = 10.49QSKK612 pKa = 10.11LEE614 pKa = 4.16PYY616 pKa = 10.24GGAGDD621 pKa = 4.1NIRR624 pKa = 11.84VKK626 pKa = 10.57NRR628 pKa = 11.84YY629 pKa = 7.62VASPAGLDD637 pKa = 3.16NALNVWGLDD646 pKa = 3.66GNDD649 pKa = 4.48IIPDD653 pKa = 3.58IPEE656 pKa = 4.35DD657 pKa = 4.08APNVPYY663 pKa = 10.88NEE665 pKa = 3.72NVMGNVALYY674 pKa = 9.84ARR676 pKa = 11.84PIRR679 pKa = 11.84PIVQNRR685 pKa = 11.84RR686 pKa = 11.84GNAGLGGMLNWQPPQQNLL704 pKa = 3.1

Molecular weight: 77.33 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A455LK58|A0A455LK58_9VIRU Nucleocapsid protein OS=Taiyuan leafhopper virus OX=2482723 PE=4 SV=1
MM1 pKa = 7.72EE2 pKa = 5.72KK3 pKa = 9.4FTSYY7 pKa = 10.98SEE9 pKa = 4.05QFVYY13 pKa = 10.62LCQIYY18 pKa = 10.03HH19 pKa = 7.28LYY21 pKa = 9.91LIAMSEE27 pKa = 4.39SKK29 pKa = 10.72QITSVTQARR38 pKa = 11.84SAALSSGSVVPTNGNQQISRR58 pKa = 11.84SEE60 pKa = 3.81AMMALASDD68 pKa = 3.81ISVIKK73 pKa = 10.36SDD75 pKa = 3.38VMVIKK80 pKa = 10.33EE81 pKa = 4.55ALTKK85 pKa = 8.67IQEE88 pKa = 4.39MIGGAMKK95 pKa = 8.4TQPHH99 pKa = 7.03APPPSYY105 pKa = 11.09DD106 pKa = 3.09SGIYY110 pKa = 9.63PKK112 pKa = 10.28LHH114 pKa = 6.14RR115 pKa = 11.84PAYY118 pKa = 10.32LGGPRR123 pKa = 11.84II124 pKa = 3.99

Molecular weight: 13.58 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

4604

124

2546

1151.0

130.55

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.777 ± 1.901

1.781 ± 0.199

5.061 ± 0.288

5.387 ± 0.39

3.844 ± 0.591

5.039 ± 0.399

3.215 ± 0.512

6.581 ± 0.427

3.975 ± 0.374

10.904 ± 0.754

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.824 ± 0.35

5.169 ± 0.519

4.93 ± 0.419

4.67 ± 0.223

5.864 ± 0.707

6.407 ± 1.314

6.103 ± 0.89

6.581 ± 0.301

1.586 ± 0.176

3.301 ± 0.362
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski