Fowl aviadenovirus D

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Aviadenovirus

Average proteome isoelectric point is 6.65

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 19 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A096ZH25|A0A096ZH25_9ADEN dUTP diphosphatase OS=Fowl aviadenovirus D OX=190064 PE=3 SV=1
MM1 pKa = 7.52AKK3 pKa = 8.76STPFTFSMGQHH14 pKa = 6.21SSRR17 pKa = 11.84KK18 pKa = 9.39RR19 pKa = 11.84PADD22 pKa = 3.44SEE24 pKa = 4.19NTQNASKK31 pKa = 10.45VAKK34 pKa = 8.38TQTSATRR41 pKa = 11.84AGVDD45 pKa = 3.89GNDD48 pKa = 4.54DD49 pKa = 4.1LNLVYY54 pKa = 9.94PFWLQNSTSGGGGGGSGGNPSLNPPFIDD82 pKa = 3.73PNGPLYY88 pKa = 10.31VQNSLLYY95 pKa = 10.35VKK97 pKa = 7.76TTAPIEE103 pKa = 4.16VEE105 pKa = 4.18NKK107 pKa = 10.19SLALAYY113 pKa = 10.24DD114 pKa = 3.34SSLDD118 pKa = 3.52VDD120 pKa = 4.26AQNQLQVKK128 pKa = 9.2VDD130 pKa = 3.45AEE132 pKa = 4.46GPIRR136 pKa = 11.84ISPDD140 pKa = 3.08GLDD143 pKa = 3.18IAVDD147 pKa = 4.11PSTLEE152 pKa = 4.49VDD154 pKa = 4.89DD155 pKa = 4.35EE156 pKa = 4.52WEE158 pKa = 4.23LTVKK162 pKa = 10.5LDD164 pKa = 3.59PAGPISSSSAGINIRR179 pKa = 11.84VDD181 pKa = 3.33DD182 pKa = 4.2TLLIEE187 pKa = 5.93DD188 pKa = 5.57DD189 pKa = 3.94DD190 pKa = 4.28TAQVKK195 pKa = 9.74EE196 pKa = 4.6LGVHH200 pKa = 6.68LNPNGPITADD210 pKa = 3.16QDD212 pKa = 4.14GLDD215 pKa = 4.68LEE217 pKa = 5.14VDD219 pKa = 3.83PQTLTVTTSGATGGVLGVLLKK240 pKa = 10.67PSGGLQTSIQGIGVAVADD258 pKa = 4.18TLTISSNTGTVEE270 pKa = 4.52VKK272 pKa = 9.83TDD274 pKa = 3.75PNGSIGSSSNGIAVVTDD291 pKa = 3.45PAGPLTTSSNGLSLKK306 pKa = 8.58LTPNGSIQSSSTGLSVQTDD325 pKa = 3.58PAGPITSGANGLSLSYY341 pKa = 9.5DD342 pKa = 3.29TSDD345 pKa = 3.48FTVSQGMLSIIRR357 pKa = 11.84NPSAYY362 pKa = 8.95PDD364 pKa = 3.84AYY366 pKa = 10.95LEE368 pKa = 4.65SGTNLLNNYY377 pKa = 7.05TAYY380 pKa = 10.66AEE382 pKa = 4.05NSSNYY387 pKa = 9.63KK388 pKa = 9.97FNCAYY393 pKa = 10.3FLQSWYY399 pKa = 11.27SNGLVTSSLYY409 pKa = 11.07LKK411 pKa = 10.39INRR414 pKa = 11.84DD415 pKa = 3.68NLTSLPSGQLSEE427 pKa = 3.98NAKK430 pKa = 10.55YY431 pKa = 8.24FTFWVPTYY439 pKa = 11.17EE440 pKa = 5.04SMNLSNVATPTITPSSVPWGAFLPAQNCTSNPAFKK475 pKa = 10.69YY476 pKa = 10.75YY477 pKa = 9.51LTQPPSIYY485 pKa = 10.32FEE487 pKa = 4.53PEE489 pKa = 3.66SGSVQTFQPVLTGDD503 pKa = 3.49WDD505 pKa = 4.24TNTYY509 pKa = 10.85NPGTVQVCILPQTVVGGQSTFVNMTCYY536 pKa = 10.52NFRR539 pKa = 11.84CQNPGIFKK547 pKa = 10.24VAASSGTFTIGPIFYY562 pKa = 10.31SCPTNKK568 pKa = 8.58LTQPP572 pKa = 3.58

Molecular weight: 60.31 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A096ZH39|A0A096ZH39_9ADEN Isoform of A0A096ZH27 Pre-hexon-linking protein VIII OS=Fowl aviadenovirus D OX=190064 GN=L4 PE=2 SV=1
MM1 pKa = 8.23DD2 pKa = 4.06YY3 pKa = 11.11AALSPHH9 pKa = 5.83VGGWALRR16 pKa = 11.84DD17 pKa = 3.88GYY19 pKa = 11.25LGDD22 pKa = 3.42SSLRR26 pKa = 11.84GGAINWSNVGSRR38 pKa = 11.84LSSALGTAGRR48 pKa = 11.84WMFNQGNRR56 pKa = 11.84FLNSNTFGQIKK67 pKa = 10.24QGFKK71 pKa = 10.64DD72 pKa = 3.17SGVIRR77 pKa = 11.84NVANLAGEE85 pKa = 4.3TLGALTDD92 pKa = 3.46IGRR95 pKa = 11.84LKK97 pKa = 10.28IQQDD101 pKa = 3.8LEE103 pKa = 4.06KK104 pKa = 10.67LRR106 pKa = 11.84RR107 pKa = 11.84KK108 pKa = 9.96ALGEE112 pKa = 4.63DD113 pKa = 4.23GPATQAEE120 pKa = 4.55LQALIQALQAQVAAGEE136 pKa = 4.64SVPTTAPTVGPSAPAEE152 pKa = 4.31VPRR155 pKa = 11.84PTTRR159 pKa = 11.84PIPEE163 pKa = 4.15MVTEE167 pKa = 3.93VRR169 pKa = 11.84PPVTSSAPAVPEE181 pKa = 3.78TDD183 pKa = 2.94RR184 pKa = 11.84PTTLEE189 pKa = 3.83MRR191 pKa = 11.84PPPAKK196 pKa = 9.84RR197 pKa = 11.84RR198 pKa = 11.84RR199 pKa = 11.84KK200 pKa = 9.85RR201 pKa = 11.84PAPGSWRR208 pKa = 11.84TRR210 pKa = 11.84LNSLSGNGVAVSRR223 pKa = 11.84RR224 pKa = 11.84RR225 pKa = 11.84MCYY228 pKa = 9.89

Molecular weight: 24.43 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

18

1

19

9142

163

1306

481.2

53.86

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.412 ± 0.413

1.499 ± 0.241

5.699 ± 0.331

6.147 ± 0.722

4.135 ± 0.236

6.519 ± 0.434

2.428 ± 0.3

3.861 ± 0.127

3.927 ± 0.436

8.127 ± 0.326

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.286 ± 0.201

4.299 ± 0.531

6.651 ± 0.258

3.828 ± 0.314

7.132 ± 0.616

7.001 ± 0.499

6.137 ± 0.419

6.683 ± 0.318

1.258 ± 0.126

3.971 ± 0.335
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski