Bagarius yarrelli (Goonch) (Bagrus yarrelli)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala;

Average proteome isoelectric point is 6.64

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 17117 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A556TWN5|A0A556TWN5_BAGYA Uncharacterized protein OS=Bagarius yarrelli OX=175774 GN=Baya_5401 PE=4 SV=1
MM1 pKa = 7.09QKK3 pKa = 8.93CTVTSSEE10 pKa = 3.9GTEE13 pKa = 4.22FNALGTEE20 pKa = 4.3SNAVSTKK27 pKa = 10.32SNEE30 pKa = 3.85AGTEE34 pKa = 4.2SNAVGAVSDD43 pKa = 4.15SVAIALKK50 pKa = 10.5AAVSEE55 pKa = 4.67SNAVRR60 pKa = 11.84IEE62 pKa = 4.17SNEE65 pKa = 3.6VSALGTGSIADD76 pKa = 3.67GTEE79 pKa = 3.58YY80 pKa = 11.1DD81 pKa = 4.09AVGTTFNALGTEE93 pKa = 3.9SDD95 pKa = 3.61AFHH98 pKa = 7.3IDD100 pKa = 3.19SLHH103 pKa = 6.73YY104 pKa = 10.26PEE106 pKa = 5.45QDD108 pKa = 2.67NHH110 pKa = 6.56KK111 pKa = 10.69NQDD114 pKa = 3.12HH115 pKa = 7.0DD116 pKa = 4.91QNDD119 pKa = 3.87PNQNPNHH126 pKa = 6.93DD127 pKa = 4.44NYY129 pKa = 11.39NPYY132 pKa = 10.12QDD134 pKa = 3.79NHH136 pKa = 6.99YY137 pKa = 10.12PDD139 pKa = 4.2QDD141 pKa = 3.93NNDD144 pKa = 3.87PNYY147 pKa = 10.51EE148 pKa = 4.5DD149 pKa = 5.29NDD151 pKa = 4.02PDD153 pKa = 3.87QDD155 pKa = 3.61NHH157 pKa = 6.83NPIYY161 pKa = 10.49QNNDD165 pKa = 3.27PDD167 pKa = 4.47KK168 pKa = 11.1DD169 pKa = 3.66NHH171 pKa = 5.23TSIYY175 pKa = 10.48EE176 pKa = 4.14NNNPNQEE183 pKa = 4.06NHH185 pKa = 6.63DD186 pKa = 4.78LIYY189 pKa = 10.96EE190 pKa = 4.28NNDD193 pKa = 3.34PDD195 pKa = 5.13QDD197 pKa = 3.7NHH199 pKa = 6.98DD200 pKa = 4.21PNN202 pKa = 4.37

Molecular weight: 22.26 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A556U1E5|A0A556U1E5_BAGYA WD repeat-containing protein 90 OS=Bagarius yarrelli OX=175774 GN=Baya_6623 PE=4 SV=1
MM1 pKa = 7.48TEE3 pKa = 4.01TGVSHH8 pKa = 7.15ARR10 pKa = 11.84AKK12 pKa = 10.43RR13 pKa = 11.84PKK15 pKa = 9.41TSRR18 pKa = 11.84KK19 pKa = 8.69KK20 pKa = 10.15AKK22 pKa = 9.53SHH24 pKa = 6.06PRR26 pKa = 11.84YY27 pKa = 10.13SDD29 pKa = 3.49MIRR32 pKa = 11.84AAVLADD38 pKa = 3.2KK39 pKa = 10.53HH40 pKa = 6.76RR41 pKa = 11.84SGASRR46 pKa = 11.84QSIQKK51 pKa = 9.37FVKK54 pKa = 9.19SHH56 pKa = 5.59YY57 pKa = 9.95KK58 pKa = 10.24VGGNADD64 pKa = 3.69AQIKK68 pKa = 9.8LALKK72 pKa = 10.03RR73 pKa = 11.84LLANGYY79 pKa = 9.21LRR81 pKa = 11.84HH82 pKa = 5.84TKK84 pKa = 10.61GLGASGAFKK93 pKa = 10.68LIRR96 pKa = 11.84AGGPAGRR103 pKa = 11.84KK104 pKa = 7.78RR105 pKa = 11.84KK106 pKa = 9.34RR107 pKa = 11.84VVRR110 pKa = 11.84RR111 pKa = 11.84RR112 pKa = 11.84KK113 pKa = 9.41PKK115 pKa = 9.58AGRR118 pKa = 11.84AKK120 pKa = 8.94RR121 pKa = 11.84TRR123 pKa = 11.84RR124 pKa = 11.84ARR126 pKa = 11.84KK127 pKa = 6.54TRR129 pKa = 11.84KK130 pKa = 8.79ARR132 pKa = 11.84KK133 pKa = 5.9TRR135 pKa = 11.84RR136 pKa = 11.84VRR138 pKa = 11.84KK139 pKa = 7.03TRR141 pKa = 11.84RR142 pKa = 11.84ARR144 pKa = 11.84KK145 pKa = 6.33TRR147 pKa = 11.84RR148 pKa = 11.84AAGSRR153 pKa = 11.84KK154 pKa = 8.25RR155 pKa = 11.84TARR158 pKa = 11.84KK159 pKa = 9.5KK160 pKa = 10.45KK161 pKa = 8.14RR162 pKa = 11.84TTGRR166 pKa = 11.84RR167 pKa = 11.84RR168 pKa = 11.84KK169 pKa = 8.89AAKK172 pKa = 9.48RR173 pKa = 11.84SKK175 pKa = 10.26SAARR179 pKa = 11.84PRR181 pKa = 11.84KK182 pKa = 8.49VKK184 pKa = 10.12RR185 pKa = 11.84AARR188 pKa = 11.84RR189 pKa = 11.84KK190 pKa = 7.3TKK192 pKa = 10.35ARR194 pKa = 11.84RR195 pKa = 11.84TGGKK199 pKa = 9.05KK200 pKa = 9.18AARR203 pKa = 11.84MKK205 pKa = 10.8

Molecular weight: 23.34 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

17117

0

17117

9727499

50

11270

568.3

63.6

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.387 ± 0.015

2.211 ± 0.013

5.146 ± 0.013

7.046 ± 0.024

3.615 ± 0.013

5.962 ± 0.021

2.67 ± 0.01

4.538 ± 0.013

5.856 ± 0.021

9.505 ± 0.023

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.353 ± 0.008

4.049 ± 0.011

5.55 ± 0.023

4.747 ± 0.017

5.617 ± 0.014

8.813 ± 0.027

5.738 ± 0.015

6.352 ± 0.015

1.123 ± 0.005

2.722 ± 0.01
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski