Rodent Torque teno virus 4

Taxonomy: Viruses; Anelloviridae; unclassified Anelloviridae

Average proteome isoelectric point is 8.81

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2H4QBT7|A0A2H4QBT7_9VIRU Capsid protein OS=Rodent Torque teno virus 4 OX=2054611 PE=3 SV=1
MM1 pKa = 7.49LRR3 pKa = 11.84RR4 pKa = 11.84KK5 pKa = 7.3TRR7 pKa = 11.84HH8 pKa = 4.98VPVMQWNPINRR19 pKa = 11.84KK20 pKa = 8.52KK21 pKa = 9.96CTIRR25 pKa = 11.84GFCPLLYY32 pKa = 10.61CLGGQKK38 pKa = 10.87GIMDD42 pKa = 4.02FTYY45 pKa = 9.9PANKK49 pKa = 10.17AILNWMGGGVHH60 pKa = 6.64SSLISLLDD68 pKa = 3.75LFWEE72 pKa = 4.1EE73 pKa = 4.41RR74 pKa = 11.84YY75 pKa = 8.89WRR77 pKa = 11.84ARR79 pKa = 11.84WSSSNQGFNLFRR91 pKa = 11.84YY92 pKa = 9.11YY93 pKa = 11.13GVTITLYY100 pKa = 8.28PCMYY104 pKa = 7.98YY105 pKa = 10.03TYY107 pKa = 9.79IFWYY111 pKa = 8.27STEE114 pKa = 3.88EE115 pKa = 3.83LAEE118 pKa = 4.51DD119 pKa = 4.07SEE121 pKa = 4.75PLTVCHH127 pKa = 6.82PSQLLLSKK135 pKa = 10.23HH136 pKa = 5.56HH137 pKa = 6.36VIVHH141 pKa = 6.44RR142 pKa = 11.84MHH144 pKa = 6.2GMKK147 pKa = 10.19VKK149 pKa = 9.95PVKK152 pKa = 10.46LRR154 pKa = 11.84IKK156 pKa = 10.04PPSQMTGTWHH166 pKa = 7.26SFAKK170 pKa = 9.25WAKK173 pKa = 9.75QPLLKK178 pKa = 10.09WRR180 pKa = 11.84VSLCDD185 pKa = 4.57IEE187 pKa = 5.3NPWTGFPNSEE197 pKa = 3.98TQGIHH202 pKa = 4.57VKK204 pKa = 9.7VWAISTTSTAAGEE217 pKa = 3.75KK218 pKa = 10.13DD219 pKa = 2.73IWYY222 pKa = 9.35FPLLDD227 pKa = 5.36DD228 pKa = 5.03GTDD231 pKa = 2.96VWICLHH237 pKa = 5.8EE238 pKa = 4.59IKK240 pKa = 10.06WNRR243 pKa = 11.84NGDD246 pKa = 3.84GPDD249 pKa = 3.32EE250 pKa = 4.62SSSNFWPVQAEE261 pKa = 4.2FQKK264 pKa = 11.24LLVPFYY270 pKa = 9.58MYY272 pKa = 11.21GFGRR276 pKa = 11.84SATFYY281 pKa = 11.25LMQKK285 pKa = 9.04DD286 pKa = 3.86VHH288 pKa = 6.22MPAPSQGDD296 pKa = 3.01KK297 pKa = 11.42GKK299 pKa = 10.3FLFVKK304 pKa = 9.18TINSPAWRR312 pKa = 11.84GADD315 pKa = 3.09GGFPQFKK322 pKa = 10.52DD323 pKa = 3.08NQFYY327 pKa = 10.69MKK329 pKa = 9.9FSTVAQIAAQGPWCMKK345 pKa = 10.27SIGNEE350 pKa = 3.84THH352 pKa = 6.5GVNLSMKK359 pKa = 10.25YY360 pKa = 9.85KK361 pKa = 10.62FHH363 pKa = 6.2FQWGGTPGTHH373 pKa = 7.08LPPVQPADD381 pKa = 3.75GGPPQPLLQSTIRR394 pKa = 11.84WGNSLRR400 pKa = 11.84ADD402 pKa = 3.61LRR404 pKa = 11.84DD405 pKa = 3.53PTTVGDD411 pKa = 4.0EE412 pKa = 4.19VLHH415 pKa = 6.38PEE417 pKa = 4.33EE418 pKa = 5.55LDD420 pKa = 3.39SAGIINPRR428 pKa = 11.84AFRR431 pKa = 11.84RR432 pKa = 11.84ITKK435 pKa = 9.2PAVSTGSRR443 pKa = 11.84SVGTLGCLRR452 pKa = 11.84PAVWSAEE459 pKa = 3.74KK460 pKa = 10.24RR461 pKa = 11.84QEE463 pKa = 3.99PSSEE467 pKa = 3.54EE468 pKa = 4.14SAQEE472 pKa = 4.3EE473 pKa = 4.87YY474 pKa = 10.96SSSEE478 pKa = 4.08TGSEE482 pKa = 4.4TEE484 pKa = 3.97TEE486 pKa = 3.94EE487 pKa = 3.71MDD489 pKa = 3.44RR490 pKa = 11.84RR491 pKa = 11.84RR492 pKa = 11.84HH493 pKa = 4.36QRR495 pKa = 11.84RR496 pKa = 11.84KK497 pKa = 9.91RR498 pKa = 11.84KK499 pKa = 9.71RR500 pKa = 11.84LEE502 pKa = 3.52QLLRR506 pKa = 11.84GLMTVGLKK514 pKa = 10.22RR515 pKa = 11.84PMMAGPSGSSQRR527 pKa = 11.84SVSII531 pKa = 3.88

Molecular weight: 60.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2H4QBT7|A0A2H4QBT7_9VIRU Capsid protein OS=Rodent Torque teno virus 4 OX=2054611 PE=3 SV=1
MM1 pKa = 7.49LRR3 pKa = 11.84RR4 pKa = 11.84KK5 pKa = 7.3TRR7 pKa = 11.84HH8 pKa = 4.98VPVMQWNPINRR19 pKa = 11.84KK20 pKa = 8.52KK21 pKa = 9.96CTIRR25 pKa = 11.84GFCPLLYY32 pKa = 10.61CLGGQKK38 pKa = 10.87GIMDD42 pKa = 4.02FTYY45 pKa = 9.9PANKK49 pKa = 10.17AILNWMGGGVHH60 pKa = 6.64SSLISLLDD68 pKa = 3.75LFWEE72 pKa = 4.1EE73 pKa = 4.41RR74 pKa = 11.84YY75 pKa = 8.89WRR77 pKa = 11.84ARR79 pKa = 11.84WSSSNQGFNLFRR91 pKa = 11.84YY92 pKa = 9.11YY93 pKa = 11.13GVTITLYY100 pKa = 8.28PCMYY104 pKa = 7.98YY105 pKa = 10.03TYY107 pKa = 9.79IFWYY111 pKa = 8.27STEE114 pKa = 3.88EE115 pKa = 3.83LAEE118 pKa = 4.51DD119 pKa = 4.07SEE121 pKa = 4.75PLTVCHH127 pKa = 6.82PSQLLLSKK135 pKa = 10.23HH136 pKa = 5.56HH137 pKa = 6.36VIVHH141 pKa = 6.44RR142 pKa = 11.84MHH144 pKa = 6.2GMKK147 pKa = 10.19VKK149 pKa = 9.95PVKK152 pKa = 10.46LRR154 pKa = 11.84IKK156 pKa = 10.04PPSQMTGTWHH166 pKa = 7.26SFAKK170 pKa = 9.25WAKK173 pKa = 9.75QPLLKK178 pKa = 10.09WRR180 pKa = 11.84VSLCDD185 pKa = 4.57IEE187 pKa = 5.3NPWTGFPNSEE197 pKa = 3.98TQGIHH202 pKa = 4.57VKK204 pKa = 9.7VWAISTTSTAAGEE217 pKa = 3.75KK218 pKa = 10.13DD219 pKa = 2.73IWYY222 pKa = 9.35FPLLDD227 pKa = 5.36DD228 pKa = 5.03GTDD231 pKa = 2.96VWICLHH237 pKa = 5.8EE238 pKa = 4.59IKK240 pKa = 10.06WNRR243 pKa = 11.84NGDD246 pKa = 3.84GPDD249 pKa = 3.32EE250 pKa = 4.62SSSNFWPVQAEE261 pKa = 4.2FQKK264 pKa = 11.24LLVPFYY270 pKa = 9.58MYY272 pKa = 11.21GFGRR276 pKa = 11.84SATFYY281 pKa = 11.25LMQKK285 pKa = 9.04DD286 pKa = 3.86VHH288 pKa = 6.22MPAPSQGDD296 pKa = 3.01KK297 pKa = 11.42GKK299 pKa = 10.3FLFVKK304 pKa = 9.18TINSPAWRR312 pKa = 11.84GADD315 pKa = 3.09GGFPQFKK322 pKa = 10.52DD323 pKa = 3.08NQFYY327 pKa = 10.69MKK329 pKa = 9.9FSTVAQIAAQGPWCMKK345 pKa = 10.27SIGNEE350 pKa = 3.84THH352 pKa = 6.5GVNLSMKK359 pKa = 10.25YY360 pKa = 9.85KK361 pKa = 10.62FHH363 pKa = 6.2FQWGGTPGTHH373 pKa = 7.08LPPVQPADD381 pKa = 3.75GGPPQPLLQSTIRR394 pKa = 11.84WGNSLRR400 pKa = 11.84ADD402 pKa = 3.61LRR404 pKa = 11.84DD405 pKa = 3.53PTTVGDD411 pKa = 4.0EE412 pKa = 4.19VLHH415 pKa = 6.38PEE417 pKa = 4.33EE418 pKa = 5.55LDD420 pKa = 3.39SAGIINPRR428 pKa = 11.84AFRR431 pKa = 11.84RR432 pKa = 11.84ITKK435 pKa = 9.2PAVSTGSRR443 pKa = 11.84SVGTLGCLRR452 pKa = 11.84PAVWSAEE459 pKa = 3.74KK460 pKa = 10.24RR461 pKa = 11.84QEE463 pKa = 3.99PSSEE467 pKa = 3.54EE468 pKa = 4.14SAQEE472 pKa = 4.3EE473 pKa = 4.87YY474 pKa = 10.96SSSEE478 pKa = 4.08TGSEE482 pKa = 4.4TEE484 pKa = 3.97TEE486 pKa = 3.94EE487 pKa = 3.71MDD489 pKa = 3.44RR490 pKa = 11.84RR491 pKa = 11.84RR492 pKa = 11.84HH493 pKa = 4.36QRR495 pKa = 11.84RR496 pKa = 11.84KK497 pKa = 9.91RR498 pKa = 11.84KK499 pKa = 9.71RR500 pKa = 11.84LEE502 pKa = 3.52QLLRR506 pKa = 11.84GLMTVGLKK514 pKa = 10.22RR515 pKa = 11.84PMMAGPSGSSQRR527 pKa = 11.84SVSII531 pKa = 3.88

Molecular weight: 60.59 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

531

531

531

531.0

60.59

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.896 ± 0.0

1.695 ± 0.0

3.766 ± 0.0

5.273 ± 0.0

4.331 ± 0.0

8.098 ± 0.0

3.013 ± 0.0

4.331 ± 0.0

5.838 ± 0.0

7.91 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.39 ± 0.0

3.202 ± 0.0

6.968 ± 0.0

4.52 ± 0.0

6.403 ± 0.0

8.286 ± 0.0

6.026 ± 0.0

5.085 ± 0.0

3.766 ± 0.0

3.202 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski