Torque teno indri virus 1

Taxonomy: Viruses; Anelloviridae; Chitorquevirus; Torque teno indriid virus 1

Average proteome isoelectric point is 7.5

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1Z1W0S6|A0A1Z1W0S6_9VIRU Capsid protein OS=Torque teno indri virus 1 OX=2010248 GN=orf1 PE=3 SV=1
MM1 pKa = 8.18DD2 pKa = 4.52YY3 pKa = 11.01SRR5 pKa = 11.84QKK7 pKa = 10.52QNEE10 pKa = 4.38AKK12 pKa = 9.34WKK14 pKa = 10.32LGINLAHH21 pKa = 6.18STWCSCGDD29 pKa = 3.28WFGHH33 pKa = 5.51LTCIYY38 pKa = 8.83YY39 pKa = 10.55RR40 pKa = 11.84SGEE43 pKa = 4.15SSTAVQAKK51 pKa = 9.67NKK53 pKa = 9.27TPEE56 pKa = 3.91TCLGGGGEE64 pKa = 4.32GGVYY68 pKa = 9.81QGGGAGGGEE77 pKa = 4.58DD78 pKa = 3.63GGEE81 pKa = 4.03DD82 pKa = 3.45ATIPDD87 pKa = 4.05AALEE91 pKa = 4.24DD92 pKa = 4.2AEE94 pKa = 4.27QQ95 pKa = 3.66

Molecular weight: 9.95 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1Z1W0T3|A0A1Z1W0T3_9VIRU ORF3 OS=Torque teno indri virus 1 OX=2010248 GN=orf3 PE=4 SV=1
MM1 pKa = 7.07PWRR4 pKa = 11.84RR5 pKa = 11.84RR6 pKa = 11.84RR7 pKa = 11.84RR8 pKa = 11.84WRR10 pKa = 11.84IPGRR14 pKa = 11.84RR15 pKa = 11.84RR16 pKa = 11.84WRR18 pKa = 11.84WRR20 pKa = 11.84RR21 pKa = 11.84WWRR24 pKa = 11.84RR25 pKa = 11.84RR26 pKa = 11.84YY27 pKa = 8.75YY28 pKa = 9.2PRR30 pKa = 11.84RR31 pKa = 11.84RR32 pKa = 11.84FRR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84TVRR40 pKa = 11.84KK41 pKa = 8.16PLNIIQYY48 pKa = 7.23QPRR51 pKa = 11.84IIKK54 pKa = 10.2RR55 pKa = 11.84CVIKK59 pKa = 10.93GKK61 pKa = 10.14VLVLGGHH68 pKa = 6.04TFQTIEE74 pKa = 4.3RR75 pKa = 11.84FHH77 pKa = 6.08HH78 pKa = 6.04TKK80 pKa = 9.25TAADD84 pKa = 3.9GTTEE88 pKa = 4.05TVFVHH93 pKa = 6.94GGTTDD98 pKa = 2.59WMTVTLQEE106 pKa = 4.94LYY108 pKa = 10.64KK109 pKa = 10.67GWKK112 pKa = 8.38QRR114 pKa = 11.84QNTWSTSNATFDD126 pKa = 3.18MARR129 pKa = 11.84YY130 pKa = 9.23KK131 pKa = 10.53GAKK134 pKa = 6.84FTLWKK139 pKa = 10.24HH140 pKa = 5.53IEE142 pKa = 3.82HH143 pKa = 7.53DD144 pKa = 4.39YY145 pKa = 10.39VVVWDD150 pKa = 4.47TEE152 pKa = 4.14QSALLTADD160 pKa = 3.6IQRR163 pKa = 11.84MQPFQAQLTEE173 pKa = 4.09KK174 pKa = 9.7NHH176 pKa = 5.22IVVRR180 pKa = 11.84SNRR183 pKa = 11.84WGNSAPAKK191 pKa = 8.12TLRR194 pKa = 11.84IKK196 pKa = 10.34PPPGMKK202 pKa = 9.8NQWYY206 pKa = 9.15YY207 pKa = 10.8MSDD210 pKa = 3.1IADD213 pKa = 3.68KK214 pKa = 10.71TLVNYY219 pKa = 8.88GFSIADD225 pKa = 3.25IRR227 pKa = 11.84DD228 pKa = 3.26GGAGDD233 pKa = 3.7TGRR236 pKa = 11.84IITPWPDD243 pKa = 2.7GSVEE247 pKa = 4.08NTVTEE252 pKa = 4.21GGKK255 pKa = 10.25KK256 pKa = 7.94YY257 pKa = 9.34TIQNYY262 pKa = 7.37SWQWDD267 pKa = 3.79LPPWQIQISDD277 pKa = 3.3KK278 pKa = 9.99WRR280 pKa = 11.84QPFWMSQRR288 pKa = 11.84GLGLTEE294 pKa = 4.33NNWIYY299 pKa = 10.56DD300 pKa = 3.4INIPYY305 pKa = 8.87YY306 pKa = 8.9QFWWGIQGSEE316 pKa = 4.23DD317 pKa = 3.47PQINTDD323 pKa = 3.16YY324 pKa = 10.32WGKK327 pKa = 10.7KK328 pKa = 7.65EE329 pKa = 5.25DD330 pKa = 3.87GMEE333 pKa = 3.74NLYY336 pKa = 10.03PYY338 pKa = 10.25KK339 pKa = 10.27ILWWDD344 pKa = 3.28QEE346 pKa = 4.09ANRR349 pKa = 11.84RR350 pKa = 11.84LFGIKK355 pKa = 9.94FPGVIHH361 pKa = 7.04ILQNGPMVPHH371 pKa = 7.01LKK373 pKa = 10.6NPFSHH378 pKa = 7.02IIDD381 pKa = 3.57YY382 pKa = 10.55KK383 pKa = 10.68FYY385 pKa = 9.9WEE387 pKa = 4.21WGGHH391 pKa = 5.27IPHH394 pKa = 6.59SRR396 pKa = 11.84NIEE399 pKa = 3.77KK400 pKa = 10.54DD401 pKa = 3.14PRR403 pKa = 11.84FQTFKK408 pKa = 11.05GQDD411 pKa = 3.23VQNPRR416 pKa = 11.84KK417 pKa = 9.88AYY419 pKa = 7.4KK420 pKa = 9.96TSLAPWDD427 pKa = 3.81FDD429 pKa = 4.23KK430 pKa = 11.53DD431 pKa = 3.8GLITKK436 pKa = 9.67HH437 pKa = 5.74AFRR440 pKa = 11.84RR441 pKa = 11.84LLSPTEE447 pKa = 4.4DD448 pKa = 3.62EE449 pKa = 4.87SDD451 pKa = 3.6CSLHH455 pKa = 6.21FKK457 pKa = 10.4EE458 pKa = 5.27RR459 pKa = 11.84VPKK462 pKa = 9.99EE463 pKa = 3.97QEE465 pKa = 3.86DD466 pKa = 4.06DD467 pKa = 3.69SSQEE471 pKa = 3.74EE472 pKa = 4.66SSCNGEE478 pKa = 4.04SDD480 pKa = 3.79SDD482 pKa = 3.99SDD484 pKa = 3.78STLQIPIQKK493 pKa = 9.68QIKK496 pKa = 9.43LIQRR500 pKa = 11.84RR501 pKa = 11.84LAMDD505 pKa = 3.4CQFRR509 pKa = 11.84KK510 pKa = 10.01RR511 pKa = 11.84LRR513 pKa = 11.84TYY515 pKa = 11.18LKK517 pKa = 10.21AQKK520 pKa = 10.39

Molecular weight: 62.27 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

705

90

520

235.0

27.5

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.965 ± 1.871

1.277 ± 0.848

6.099 ± 0.526

5.106 ± 1.04

3.546 ± 0.689

7.234 ± 3.434

2.553 ± 0.199

6.099 ± 1.464

7.801 ± 2.046

5.39 ± 0.327

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.844 ± 0.222

3.83 ± 0.298

5.106 ± 0.845

6.241 ± 0.425

8.085 ± 1.979

6.95 ± 3.869

6.667 ± 0.343

2.979 ± 1.099

4.681 ± 1.056

3.546 ± 1.114
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski