Fulmarus glacialis (Northern fulmar)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Archosauria;

Average proteome isoelectric point is 6.66

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8115 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A093KNT1|A0A093KNT1_FULGA Uncharacterized protein (Fragment) OS=Fulmarus glacialis OX=30455 GN=N327_02277 PE=4 SV=1
GG1 pKa = 7.59SYY3 pKa = 10.4HH4 pKa = 7.4CGQCKK9 pKa = 9.56PGYY12 pKa = 9.17TGDD15 pKa = 3.61QARR18 pKa = 11.84GCQAEE23 pKa = 4.14RR24 pKa = 11.84SCRR27 pKa = 11.84NRR29 pKa = 11.84ALNPCSVHH37 pKa = 5.72ARR39 pKa = 11.84CIEE42 pKa = 3.78EE43 pKa = 3.82RR44 pKa = 11.84RR45 pKa = 11.84GEE47 pKa = 4.25VTCICGIGWAGDD59 pKa = 3.89GYY61 pKa = 11.59VCGKK65 pKa = 10.32DD66 pKa = 3.5VDD68 pKa = 3.48IDD70 pKa = 4.16GYY72 pKa = 10.1PNEE75 pKa = 4.55EE76 pKa = 4.13LSCSAEE82 pKa = 3.8NCRR85 pKa = 11.84KK86 pKa = 10.08DD87 pKa = 3.11NCRR90 pKa = 11.84FVPNSGQEE98 pKa = 4.06DD99 pKa = 4.09ADD101 pKa = 3.68SDD103 pKa = 4.74GIGDD107 pKa = 4.44ACDD110 pKa = 4.46DD111 pKa = 4.56DD112 pKa = 6.96ADD114 pKa = 4.36GDD116 pKa = 4.52GIPNEE121 pKa = 4.01QDD123 pKa = 3.11NCVLAPNVNQRR134 pKa = 11.84NGDD137 pKa = 3.22QDD139 pKa = 3.49IFGDD143 pKa = 3.76ACDD146 pKa = 3.38NCRR149 pKa = 11.84NVLNNDD155 pKa = 3.07QRR157 pKa = 11.84DD158 pKa = 3.45TDD160 pKa = 3.87GDD162 pKa = 4.16GKK164 pKa = 11.42GDD166 pKa = 3.74ACDD169 pKa = 5.17DD170 pKa = 4.26DD171 pKa = 4.15MDD173 pKa = 6.26GDD175 pKa = 4.5GIKK178 pKa = 10.77NLLDD182 pKa = 3.41NCQRR186 pKa = 11.84IPNQDD191 pKa = 3.43QEE193 pKa = 5.62DD194 pKa = 3.92KK195 pKa = 11.46DD196 pKa = 3.9NDD198 pKa = 4.31GVGDD202 pKa = 4.05ACDD205 pKa = 3.47SCPAISNPNQSDD217 pKa = 3.32VDD219 pKa = 3.63NDD221 pKa = 4.07LVGDD225 pKa = 4.11SCDD228 pKa = 3.63TNQDD232 pKa = 3.04SDD234 pKa = 4.07GDD236 pKa = 4.03GHH238 pKa = 7.17QDD240 pKa = 3.22STDD243 pKa = 3.33NCPTIINSSQLDD255 pKa = 3.61TDD257 pKa = 3.69KK258 pKa = 11.62DD259 pKa = 4.04GLGDD263 pKa = 3.83EE264 pKa = 5.5CDD266 pKa = 5.74DD267 pKa = 6.0DD268 pKa = 7.44DD269 pKa = 7.55DD270 pKa = 7.26DD271 pKa = 7.31DD272 pKa = 6.25GIPDD276 pKa = 5.2LLPPGPDD283 pKa = 2.92NCRR286 pKa = 11.84LVPNPGQEE294 pKa = 4.19DD295 pKa = 4.25EE296 pKa = 4.92NGDD299 pKa = 3.9GVGDD303 pKa = 3.51ICEE306 pKa = 4.29SDD308 pKa = 3.45FDD310 pKa = 3.9QDD312 pKa = 3.89TVIDD316 pKa = 4.23QIDD319 pKa = 3.82VCPEE323 pKa = 3.54NAEE326 pKa = 3.78ITLTDD331 pKa = 3.83FRR333 pKa = 11.84AYY335 pKa = 8.19QTVVLDD341 pKa = 4.22PEE343 pKa = 5.32GDD345 pKa = 3.65AQIDD349 pKa = 4.13PNWVVLNQGMEE360 pKa = 4.11IVQTMNSDD368 pKa = 3.19PGLAVGYY375 pKa = 7.31TAFNGVDD382 pKa = 3.99FEE384 pKa = 4.97GTFHH388 pKa = 6.81VNTVTDD394 pKa = 3.57DD395 pKa = 4.08DD396 pKa = 4.35YY397 pKa = 12.0AGFIFGYY404 pKa = 9.58QDD406 pKa = 2.83SSSFYY411 pKa = 10.47VVMWKK416 pKa = 7.78QTEE419 pKa = 3.86QTYY422 pKa = 8.13WQATPFRR429 pKa = 11.84AVAEE433 pKa = 4.17PGIQLKK439 pKa = 10.07AVKK442 pKa = 10.09SKK444 pKa = 9.55TGPGEE449 pKa = 3.82HH450 pKa = 6.52LRR452 pKa = 11.84NSLWHH457 pKa = 6.51TGDD460 pKa = 3.06TSDD463 pKa = 5.19QVRR466 pKa = 11.84LLWKK470 pKa = 10.3DD471 pKa = 3.22PRR473 pKa = 11.84NVGWKK478 pKa = 10.39DD479 pKa = 3.18KK480 pKa = 11.21VSYY483 pKa = 10.33RR484 pKa = 11.84WFLQHH489 pKa = 6.9RR490 pKa = 11.84PQIGYY495 pKa = 9.07IRR497 pKa = 11.84ARR499 pKa = 11.84FYY501 pKa = 11.09EE502 pKa = 4.54GSDD505 pKa = 3.39LVADD509 pKa = 3.84SGVTIDD515 pKa = 3.09TTMRR519 pKa = 11.84GGRR522 pKa = 11.84LGVFCFSQEE531 pKa = 3.94NIIWSNLKK539 pKa = 9.68YY540 pKa = 10.31RR541 pKa = 11.84CNDD544 pKa = 4.19TIPDD548 pKa = 4.06DD549 pKa = 3.93FQEE552 pKa = 4.44FQAQQFGVGDD562 pKa = 3.49II563 pKa = 4.15

Molecular weight: 61.81 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A093KQX7|A0A093KQX7_FULGA DENN domain-containing protein 4C OS=Fulmarus glacialis OX=30455 GN=N327_12531 PE=4 SV=1
TT1 pKa = 7.02HH2 pKa = 7.43ANSPAAVTHH11 pKa = 5.8ARR13 pKa = 11.84GPAVTRR19 pKa = 11.84ASSPAVTPARR29 pKa = 11.84SPAVTRR35 pKa = 11.84ASSPAVTPARR45 pKa = 11.84SPAVTHH51 pKa = 6.67ASSPAVTRR59 pKa = 11.84ASSPVVTPARR69 pKa = 11.84SPAVTHH75 pKa = 6.67ASSPAVTHH83 pKa = 6.02ARR85 pKa = 11.84SPAVTRR91 pKa = 11.84ASSPAVTHH99 pKa = 6.18ARR101 pKa = 11.84GPAVTRR107 pKa = 11.84AGRR110 pKa = 11.84PSS112 pKa = 2.94

Molecular weight: 10.94 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8115

0

8115

3363607

31

5583

414.5

46.6

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.352 ± 0.022

2.231 ± 0.025

5.038 ± 0.021

7.159 ± 0.032

3.94 ± 0.018

5.802 ± 0.03

2.536 ± 0.012

5.051 ± 0.02

6.479 ± 0.03

9.716 ± 0.039

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.283 ± 0.011

4.199 ± 0.019

5.251 ± 0.034

4.669 ± 0.028

5.157 ± 0.025

8.23 ± 0.038

5.397 ± 0.019

6.314 ± 0.02

1.18 ± 0.009

3.009 ± 0.015
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski