Amino acid dipepetide frequency for Rosellinia necatrix endornavirus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
2.86AlaAla: 2.86 ± 0.0
0.0AlaCys: 0.0 ± 0.0
1.271AlaAsp: 1.271 ± 0.0
2.224AlaGlu: 2.224 ± 0.0
1.589AlaPhe: 1.589 ± 0.0
1.271AlaGly: 1.271 ± 0.0
1.589AlaHis: 1.589 ± 0.0
3.813AlaIle: 3.813 ± 0.0
2.86AlaLys: 2.86 ± 0.0
2.86AlaLeu: 2.86 ± 0.0
1.907AlaMet: 1.907 ± 0.0
1.907AlaAsn: 1.907 ± 0.0
1.589AlaPro: 1.589 ± 0.0
1.271AlaGln: 1.271 ± 0.0
3.178AlaArg: 3.178 ± 0.0
2.542AlaSer: 2.542 ± 0.0
5.084AlaThr: 5.084 ± 0.0
1.271AlaVal: 1.271 ± 0.0
0.636AlaTrp: 0.636 ± 0.0
1.907AlaTyr: 1.907 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.636CysAla: 0.636 ± 0.0
0.953CysCys: 0.953 ± 0.0
0.953CysAsp: 0.953 ± 0.0
0.0CysGlu: 0.0 ± 0.0
1.589CysPhe: 1.589 ± 0.0
0.953CysGly: 0.953 ± 0.0
1.271CysHis: 1.271 ± 0.0
1.271CysIle: 1.271 ± 0.0
1.271CysLys: 1.271 ± 0.0
2.224CysLeu: 2.224 ± 0.0
0.318CysMet: 0.318 ± 0.0
1.589CysAsn: 1.589 ± 0.0
0.953CysPro: 0.953 ± 0.0
0.953CysGln: 0.953 ± 0.0
0.636CysArg: 0.636 ± 0.0
1.271CysSer: 1.271 ± 0.0
0.636CysThr: 0.636 ± 0.0
1.271CysVal: 1.271 ± 0.0
0.318CysTrp: 0.318 ± 0.0
1.589CysTyr: 1.589 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
2.224AspAla: 2.224 ± 0.0
0.953AspCys: 0.953 ± 0.0
6.355AspAsp: 6.355 ± 0.0
5.084AspGlu: 5.084 ± 0.0
1.907AspPhe: 1.907 ± 0.0
3.178AspGly: 3.178 ± 0.0
2.224AspHis: 2.224 ± 0.0
6.991AspIle: 6.991 ± 0.0
4.131AspLys: 4.131 ± 0.0
6.991AspLeu: 6.991 ± 0.0
2.86AspMet: 2.86 ± 0.0
3.495AspAsn: 3.495 ± 0.0
1.907AspPro: 1.907 ± 0.0
1.271AspGln: 1.271 ± 0.0
1.907AspArg: 1.907 ± 0.0
3.178AspSer: 3.178 ± 0.0
1.907AspThr: 1.907 ± 0.0
3.495AspVal: 3.495 ± 0.0
0.636AspTrp: 0.636 ± 0.0
4.766AspTyr: 4.766 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
2.542GluAla: 2.542 ± 0.0
0.953GluCys: 0.953 ± 0.0
3.178GluAsp: 3.178 ± 0.0
2.86GluGlu: 2.86 ± 0.0
3.178GluPhe: 3.178 ± 0.0
3.178GluGly: 3.178 ± 0.0
1.907GluHis: 1.907 ± 0.0
3.813GluIle: 3.813 ± 0.0
2.224GluLys: 2.224 ± 0.0
7.626GluLeu: 7.626 ± 0.0
0.953GluMet: 0.953 ± 0.0
1.907GluAsn: 1.907 ± 0.0
2.86GluPro: 2.86 ± 0.0
2.542GluGln: 2.542 ± 0.0
1.907GluArg: 1.907 ± 0.0
2.86GluSer: 2.86 ± 0.0
2.86GluThr: 2.86 ± 0.0
2.86GluVal: 2.86 ± 0.0
0.636GluTrp: 0.636 ± 0.0
1.589GluTyr: 1.589 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
1.907PheAla: 1.907 ± 0.0
0.953PheCys: 0.953 ± 0.0
3.178PheAsp: 3.178 ± 0.0
1.589PheGlu: 1.589 ± 0.0
0.318PhePhe: 0.318 ± 0.0
2.86PheGly: 2.86 ± 0.0
0.318PheHis: 0.318 ± 0.0
3.813PheIle: 3.813 ± 0.0
3.495PheLys: 3.495 ± 0.0
1.907PheLeu: 1.907 ± 0.0
1.271PheMet: 1.271 ± 0.0
4.766PheAsn: 4.766 ± 0.0
0.636PhePro: 0.636 ± 0.0
0.953PheGln: 0.953 ± 0.0
0.636PheArg: 0.636 ± 0.0
1.907PheSer: 1.907 ± 0.0
2.86PheThr: 2.86 ± 0.0
1.907PheVal: 1.907 ± 0.0
0.318PheTrp: 0.318 ± 0.0
0.953PheTyr: 0.953 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
1.271GlyAla: 1.271 ± 0.0
1.589GlyCys: 1.589 ± 0.0
4.449GlyAsp: 4.449 ± 0.0
1.271GlyGlu: 1.271 ± 0.0
1.589GlyPhe: 1.589 ± 0.0
2.224GlyGly: 2.224 ± 0.0
1.589GlyHis: 1.589 ± 0.0
2.86GlyIle: 2.86 ± 0.0
6.355GlyLys: 6.355 ± 0.0
4.449GlyLeu: 4.449 ± 0.0
0.953GlyMet: 0.953 ± 0.0
2.224GlyAsn: 2.224 ± 0.0
1.907GlyPro: 1.907 ± 0.0
1.271GlyGln: 1.271 ± 0.0
3.178GlyArg: 3.178 ± 0.0
3.813GlySer: 3.813 ± 0.0
1.589GlyThr: 1.589 ± 0.0
2.86GlyVal: 2.86 ± 0.0
0.636GlyTrp: 0.636 ± 0.0
1.589GlyTyr: 1.589 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
2.224HisAla: 2.224 ± 0.0
1.271HisCys: 1.271 ± 0.0
2.542HisAsp: 2.542 ± 0.0
1.271HisGlu: 1.271 ± 0.0
0.953HisPhe: 0.953 ± 0.0
0.636HisGly: 0.636 ± 0.0
1.589HisHis: 1.589 ± 0.0
2.86HisIle: 2.86 ± 0.0
2.86HisLys: 2.86 ± 0.0
4.131HisLeu: 4.131 ± 0.0
0.636HisMet: 0.636 ± 0.0
2.224HisAsn: 2.224 ± 0.0
1.271HisPro: 1.271 ± 0.0
0.318HisGln: 0.318 ± 0.0
0.953HisArg: 0.953 ± 0.0
2.86HisSer: 2.86 ± 0.0
0.636HisThr: 0.636 ± 0.0
0.953HisVal: 0.953 ± 0.0
0.953HisTrp: 0.953 ± 0.0
0.953HisTyr: 0.953 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
1.271IleAla: 1.271 ± 0.0
0.953IleCys: 0.953 ± 0.0
4.131IleAsp: 4.131 ± 0.0
5.084IleGlu: 5.084 ± 0.0
2.542IlePhe: 2.542 ± 0.0
3.495IleGly: 3.495 ± 0.0
0.953IleHis: 0.953 ± 0.0
4.449IleIle: 4.449 ± 0.0
6.991IleLys: 6.991 ± 0.0
6.673IleLeu: 6.673 ± 0.0
1.907IleMet: 1.907 ± 0.0
6.355IleAsn: 6.355 ± 0.0
3.178IlePro: 3.178 ± 0.0
2.224IleGln: 2.224 ± 0.0
4.449IleArg: 4.449 ± 0.0
7.309IleSer: 7.309 ± 0.0
6.673IleThr: 6.673 ± 0.0
5.402IleVal: 5.402 ± 0.0
0.0IleTrp: 0.0 ± 0.0
1.589IleTyr: 1.589 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
3.178LysAla: 3.178 ± 0.0
2.224LysCys: 2.224 ± 0.0
2.542LysAsp: 2.542 ± 0.0
3.813LysGlu: 3.813 ± 0.0
4.131LysPhe: 4.131 ± 0.0
2.86LysGly: 2.86 ± 0.0
3.178LysHis: 3.178 ± 0.0
6.037LysIle: 6.037 ± 0.0
3.495LysLys: 3.495 ± 0.0
6.355LysLeu: 6.355 ± 0.0
0.953LysMet: 0.953 ± 0.0
4.766LysAsn: 4.766 ± 0.0
3.813LysPro: 3.813 ± 0.0
2.542LysGln: 2.542 ± 0.0
4.449LysArg: 4.449 ± 0.0
5.402LysSer: 5.402 ± 0.0
4.449LysThr: 4.449 ± 0.0
3.813LysVal: 3.813 ± 0.0
0.636LysTrp: 0.636 ± 0.0
3.495LysTyr: 3.495 ± 0.0
0.318LysXaa: 0.318 ± 0.0
Leu
4.766LeuAla: 4.766 ± 0.0
1.907LeuCys: 1.907 ± 0.0
5.084LeuAsp: 5.084 ± 0.0
3.813LeuGlu: 3.813 ± 0.0
3.178LeuPhe: 3.178 ± 0.0
3.813LeuGly: 3.813 ± 0.0
2.86LeuHis: 2.86 ± 0.0
5.084LeuIle: 5.084 ± 0.0
4.131LeuLys: 4.131 ± 0.0
6.991LeuLeu: 6.991 ± 0.0
1.907LeuMet: 1.907 ± 0.0
9.851LeuAsn: 9.851 ± 0.0
3.813LeuPro: 3.813 ± 0.0
2.542LeuGln: 2.542 ± 0.0
4.766LeuArg: 4.766 ± 0.0
6.037LeuSer: 6.037 ± 0.0
8.262LeuThr: 8.262 ± 0.0
5.084LeuVal: 5.084 ± 0.0
0.636LeuTrp: 0.636 ± 0.0
4.449LeuTyr: 4.449 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
1.907MetAla: 1.907 ± 0.0
0.953MetCys: 0.953 ± 0.0
1.589MetAsp: 1.589 ± 0.0
1.907MetGlu: 1.907 ± 0.0
0.636MetPhe: 0.636 ± 0.0
1.907MetGly: 1.907 ± 0.0
1.589MetHis: 1.589 ± 0.0
2.224MetIle: 2.224 ± 0.0
1.589MetLys: 1.589 ± 0.0
2.86MetLeu: 2.86 ± 0.0
2.542MetMet: 2.542 ± 0.0
1.907MetAsn: 1.907 ± 0.0
0.636MetPro: 0.636 ± 0.0
0.636MetGln: 0.636 ± 0.0
1.589MetArg: 1.589 ± 0.0
2.224MetSer: 2.224 ± 0.0
1.589MetThr: 1.589 ± 0.0
2.224MetVal: 2.224 ± 0.0
0.318MetTrp: 0.318 ± 0.0
0.953MetTyr: 0.953 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
3.178AsnAla: 3.178 ± 0.0
1.589AsnCys: 1.589 ± 0.0
5.72AsnAsp: 5.72 ± 0.0
4.449AsnGlu: 4.449 ± 0.0
2.542AsnPhe: 2.542 ± 0.0
4.131AsnGly: 4.131 ± 0.0
1.907AsnHis: 1.907 ± 0.0
5.084AsnIle: 5.084 ± 0.0
4.131AsnLys: 4.131 ± 0.0
7.309AsnLeu: 7.309 ± 0.0
2.224AsnMet: 2.224 ± 0.0
6.037AsnAsn: 6.037 ± 0.0
2.86AsnPro: 2.86 ± 0.0
2.542AsnGln: 2.542 ± 0.0
1.271AsnArg: 1.271 ± 0.0
4.766AsnSer: 4.766 ± 0.0
3.178AsnThr: 3.178 ± 0.0
6.037AsnVal: 6.037 ± 0.0
0.636AsnTrp: 0.636 ± 0.0
5.084AsnTyr: 5.084 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
1.271ProAla: 1.271 ± 0.0
0.953ProCys: 0.953 ± 0.0
2.86ProAsp: 2.86 ± 0.0
1.589ProGlu: 1.589 ± 0.0
0.953ProPhe: 0.953 ± 0.0
0.953ProGly: 0.953 ± 0.0
0.953ProHis: 0.953 ± 0.0
5.084ProIle: 5.084 ± 0.0
2.86ProLys: 2.86 ± 0.0
1.589ProLeu: 1.589 ± 0.0
2.224ProMet: 2.224 ± 0.0
2.224ProAsn: 2.224 ± 0.0
1.589ProPro: 1.589 ± 0.0
3.178ProGln: 3.178 ± 0.0
0.953ProArg: 0.953 ± 0.0
4.131ProSer: 4.131 ± 0.0
3.495ProThr: 3.495 ± 0.0
2.542ProVal: 2.542 ± 0.0
0.636ProTrp: 0.636 ± 0.0
0.636ProTyr: 0.636 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
1.589GlnAla: 1.589 ± 0.0
0.953GlnCys: 0.953 ± 0.0
2.542GlnAsp: 2.542 ± 0.0
1.907GlnGlu: 1.907 ± 0.0
0.953GlnPhe: 0.953 ± 0.0
2.224GlnGly: 2.224 ± 0.0
0.636GlnHis: 0.636 ± 0.0
2.542GlnIle: 2.542 ± 0.0
1.589GlnLys: 1.589 ± 0.0
3.813GlnLeu: 3.813 ± 0.0
1.589GlnMet: 1.589 ± 0.0
0.636GlnAsn: 0.636 ± 0.0
2.224GlnPro: 2.224 ± 0.0
1.589GlnGln: 1.589 ± 0.0
1.589GlnArg: 1.589 ± 0.0
1.589GlnSer: 1.589 ± 0.0
1.589GlnThr: 1.589 ± 0.0
2.86GlnVal: 2.86 ± 0.0
0.318GlnTrp: 0.318 ± 0.0
0.953GlnTyr: 0.953 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
2.86ArgAla: 2.86 ± 0.0
0.636ArgCys: 0.636 ± 0.0
2.224ArgAsp: 2.224 ± 0.0
1.589ArgGlu: 1.589 ± 0.0
3.495ArgPhe: 3.495 ± 0.0
1.589ArgGly: 1.589 ± 0.0
2.86ArgHis: 2.86 ± 0.0
3.178ArgIle: 3.178 ± 0.0
1.271ArgLys: 1.271 ± 0.0
2.86ArgLeu: 2.86 ± 0.0
2.86ArgMet: 2.86 ± 0.0
2.86ArgAsn: 2.86 ± 0.0
2.224ArgPro: 2.224 ± 0.0
1.907ArgGln: 1.907 ± 0.0
2.224ArgArg: 2.224 ± 0.0
2.224ArgSer: 2.224 ± 0.0
1.589ArgThr: 1.589 ± 0.0
2.224ArgVal: 2.224 ± 0.0
0.636ArgTrp: 0.636 ± 0.0
2.86ArgTyr: 2.86 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
1.271SerAla: 1.271 ± 0.0
1.589SerCys: 1.589 ± 0.0
3.813SerAsp: 3.813 ± 0.0
3.178SerGlu: 3.178 ± 0.0
2.224SerPhe: 2.224 ± 0.0
4.766SerGly: 4.766 ± 0.0
1.907SerHis: 1.907 ± 0.0
4.766SerIle: 4.766 ± 0.0
4.131SerLys: 4.131 ± 0.0
5.402SerLeu: 5.402 ± 0.0
2.224SerMet: 2.224 ± 0.0
4.449SerAsn: 4.449 ± 0.0
1.907SerPro: 1.907 ± 0.0
3.178SerGln: 3.178 ± 0.0
3.495SerArg: 3.495 ± 0.0
3.495SerSer: 3.495 ± 0.0
5.72SerThr: 5.72 ± 0.0
3.178SerVal: 3.178 ± 0.0
0.636SerTrp: 0.636 ± 0.0
3.178SerTyr: 3.178 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
1.907ThrAla: 1.907 ± 0.0
0.318ThrCys: 0.318 ± 0.0
4.766ThrAsp: 4.766 ± 0.0
2.224ThrGlu: 2.224 ± 0.0
2.224ThrPhe: 2.224 ± 0.0
3.495ThrGly: 3.495 ± 0.0
0.636ThrHis: 0.636 ± 0.0
6.037ThrIle: 6.037 ± 0.0
8.262ThrLys: 8.262 ± 0.0
3.495ThrLeu: 3.495 ± 0.0
2.224ThrMet: 2.224 ± 0.0
7.309ThrAsn: 7.309 ± 0.0
2.86ThrPro: 2.86 ± 0.0
1.907ThrGln: 1.907 ± 0.0
1.907ThrArg: 1.907 ± 0.0
2.542ThrSer: 2.542 ± 0.0
4.449ThrThr: 4.449 ± 0.0
5.72ThrVal: 5.72 ± 0.0
0.953ThrTrp: 0.953 ± 0.0
1.271ThrTyr: 1.271 ± 0.0
0.318ThrXaa: 0.318 ± 0.0
Val
2.86ValAla: 2.86 ± 0.0
0.953ValCys: 0.953 ± 0.0
3.495ValAsp: 3.495 ± 0.0
5.402ValGlu: 5.402 ± 0.0
0.953ValPhe: 0.953 ± 0.0
2.224ValGly: 2.224 ± 0.0
1.589ValHis: 1.589 ± 0.0
2.86ValIle: 2.86 ± 0.0
6.673ValLys: 6.673 ± 0.0
6.673ValLeu: 6.673 ± 0.0
0.636ValMet: 0.636 ± 0.0
6.991ValAsn: 6.991 ± 0.0
2.86ValPro: 2.86 ± 0.0
1.271ValGln: 1.271 ± 0.0
3.178ValArg: 3.178 ± 0.0
3.495ValSer: 3.495 ± 0.0
3.495ValThr: 3.495 ± 0.0
1.589ValVal: 1.589 ± 0.0
0.318ValTrp: 0.318 ± 0.0
2.224ValTyr: 2.224 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.636TrpAla: 0.636 ± 0.0
0.318TrpCys: 0.318 ± 0.0
0.636TrpAsp: 0.636 ± 0.0
0.0TrpGlu: 0.0 ± 0.0
0.953TrpPhe: 0.953 ± 0.0
0.0TrpGly: 0.0 ± 0.0
0.636TrpHis: 0.636 ± 0.0
0.318TrpIle: 0.318 ± 0.0
0.0TrpLys: 0.0 ± 0.0
0.318TrpLeu: 0.318 ± 0.0
0.636TrpMet: 0.636 ± 0.0
0.636TrpAsn: 0.636 ± 0.0
0.318TrpPro: 0.318 ± 0.0
0.318TrpGln: 0.318 ± 0.0
0.953TrpArg: 0.953 ± 0.0
1.271TrpSer: 1.271 ± 0.0
0.953TrpThr: 0.953 ± 0.0
0.953TrpVal: 0.953 ± 0.0
0.318TrpTrp: 0.318 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
1.271TyrAla: 1.271 ± 0.0
0.636TyrCys: 0.636 ± 0.0
4.131TyrAsp: 4.131 ± 0.0
2.86TyrGlu: 2.86 ± 0.0
0.636TyrPhe: 0.636 ± 0.0
1.907TyrGly: 1.907 ± 0.0
1.907TyrHis: 1.907 ± 0.0
2.542TyrIle: 2.542 ± 0.0
4.131TyrLys: 4.131 ± 0.0
4.131TyrLeu: 4.131 ± 0.0
0.636TyrMet: 0.636 ± 0.0
2.542TyrAsn: 2.542 ± 0.0
1.271TyrPro: 1.271 ± 0.0
1.271TyrGln: 1.271 ± 0.0
0.953TyrArg: 0.953 ± 0.0
1.589TyrSer: 1.589 ± 0.0
3.813TyrThr: 3.813 ± 0.0
3.495TyrVal: 3.495 ± 0.0
0.0TyrTrp: 0.0 ± 0.0
1.589TyrTyr: 1.589 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.318XaaGlu: 0.318 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.318XaaLeu: 0.318 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.318XaaXaa: 0.318 ± 0.0
Statistics based on 1 proteins (3148 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski