Amino acid dipepetide frequency for Hubei tetragnatha maxillosa virus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
2.819AlaAla: 2.819 ± 0.0
1.057AlaCys: 1.057 ± 0.0
1.409AlaAsp: 1.409 ± 0.0
2.114AlaGlu: 2.114 ± 0.0
3.171AlaPhe: 3.171 ± 0.0
4.581AlaGly: 4.581 ± 0.0
1.762AlaHis: 1.762 ± 0.0
3.524AlaIle: 3.524 ± 0.0
3.171AlaLys: 3.171 ± 0.0
5.99AlaLeu: 5.99 ± 0.0
0.352AlaMet: 0.352 ± 0.0
2.114AlaAsn: 2.114 ± 0.0
2.114AlaPro: 2.114 ± 0.0
3.524AlaGln: 3.524 ± 0.0
3.524AlaArg: 3.524 ± 0.0
4.581AlaSer: 4.581 ± 0.0
2.819AlaThr: 2.819 ± 0.0
6.342AlaVal: 6.342 ± 0.0
0.705AlaTrp: 0.705 ± 0.0
2.467AlaTyr: 2.467 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.705CysAla: 0.705 ± 0.0
0.352CysCys: 0.352 ± 0.0
0.705CysAsp: 0.705 ± 0.0
0.352CysGlu: 0.352 ± 0.0
1.762CysPhe: 1.762 ± 0.0
1.409CysGly: 1.409 ± 0.0
0.705CysHis: 0.705 ± 0.0
1.762CysIle: 1.762 ± 0.0
1.409CysLys: 1.409 ± 0.0
2.114CysLeu: 2.114 ± 0.0
0.352CysMet: 0.352 ± 0.0
0.705CysAsn: 0.705 ± 0.0
1.409CysPro: 1.409 ± 0.0
0.0CysGln: 0.0 ± 0.0
0.705CysArg: 0.705 ± 0.0
1.057CysSer: 1.057 ± 0.0
0.352CysThr: 0.352 ± 0.0
0.705CysVal: 0.705 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.352CysTyr: 0.352 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
3.876AspAla: 3.876 ± 0.0
0.705AspCys: 0.705 ± 0.0
2.819AspAsp: 2.819 ± 0.0
3.524AspGlu: 3.524 ± 0.0
2.467AspPhe: 2.467 ± 0.0
2.819AspGly: 2.819 ± 0.0
1.762AspHis: 1.762 ± 0.0
4.581AspIle: 4.581 ± 0.0
4.581AspLys: 4.581 ± 0.0
4.228AspLeu: 4.228 ± 0.0
2.467AspMet: 2.467 ± 0.0
1.762AspAsn: 1.762 ± 0.0
4.228AspPro: 4.228 ± 0.0
1.762AspGln: 1.762 ± 0.0
2.114AspArg: 2.114 ± 0.0
3.876AspSer: 3.876 ± 0.0
2.467AspThr: 2.467 ± 0.0
3.171AspVal: 3.171 ± 0.0
0.705AspTrp: 0.705 ± 0.0
2.114AspTyr: 2.114 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
4.581GluAla: 4.581 ± 0.0
1.057GluCys: 1.057 ± 0.0
5.285GluAsp: 5.285 ± 0.0
4.933GluGlu: 4.933 ± 0.0
5.638GluPhe: 5.638 ± 0.0
3.171GluGly: 3.171 ± 0.0
0.0GluHis: 0.0 ± 0.0
4.933GluIle: 4.933 ± 0.0
2.467GluLys: 2.467 ± 0.0
6.695GluLeu: 6.695 ± 0.0
1.762GluMet: 1.762 ± 0.0
2.114GluAsn: 2.114 ± 0.0
2.467GluPro: 2.467 ± 0.0
1.762GluGln: 1.762 ± 0.0
2.467GluArg: 2.467 ± 0.0
4.933GluSer: 4.933 ± 0.0
5.285GluThr: 5.285 ± 0.0
3.524GluVal: 3.524 ± 0.0
0.0GluTrp: 0.0 ± 0.0
2.467GluTyr: 2.467 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
2.467PheAla: 2.467 ± 0.0
1.057PheCys: 1.057 ± 0.0
2.467PheAsp: 2.467 ± 0.0
3.171PheGlu: 3.171 ± 0.0
1.409PhePhe: 1.409 ± 0.0
3.876PheGly: 3.876 ± 0.0
0.705PheHis: 0.705 ± 0.0
2.467PheIle: 2.467 ± 0.0
3.524PheLys: 3.524 ± 0.0
4.933PheLeu: 4.933 ± 0.0
1.057PheMet: 1.057 ± 0.0
1.762PheAsn: 1.762 ± 0.0
2.114PhePro: 2.114 ± 0.0
3.876PheGln: 3.876 ± 0.0
2.114PheArg: 2.114 ± 0.0
3.876PheSer: 3.876 ± 0.0
4.933PheThr: 4.933 ± 0.0
2.467PheVal: 2.467 ± 0.0
1.409PheTrp: 1.409 ± 0.0
1.409PheTyr: 1.409 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
2.467GlyAla: 2.467 ± 0.0
0.352GlyCys: 0.352 ± 0.0
4.581GlyAsp: 4.581 ± 0.0
3.524GlyGlu: 3.524 ± 0.0
3.876GlyPhe: 3.876 ± 0.0
3.524GlyGly: 3.524 ± 0.0
1.057GlyHis: 1.057 ± 0.0
4.581GlyIle: 4.581 ± 0.0
5.285GlyLys: 5.285 ± 0.0
4.228GlyLeu: 4.228 ± 0.0
1.057GlyMet: 1.057 ± 0.0
1.409GlyAsn: 1.409 ± 0.0
3.524GlyPro: 3.524 ± 0.0
2.114GlyGln: 2.114 ± 0.0
2.114GlyArg: 2.114 ± 0.0
5.638GlySer: 5.638 ± 0.0
5.285GlyThr: 5.285 ± 0.0
4.933GlyVal: 4.933 ± 0.0
0.0GlyTrp: 0.0 ± 0.0
1.762GlyTyr: 1.762 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
0.705HisAla: 0.705 ± 0.0
0.0HisCys: 0.0 ± 0.0
0.705HisAsp: 0.705 ± 0.0
1.409HisGlu: 1.409 ± 0.0
0.705HisPhe: 0.705 ± 0.0
1.762HisGly: 1.762 ± 0.0
0.705HisHis: 0.705 ± 0.0
2.114HisIle: 2.114 ± 0.0
0.705HisLys: 0.705 ± 0.0
0.705HisLeu: 0.705 ± 0.0
0.705HisMet: 0.705 ± 0.0
0.352HisAsn: 0.352 ± 0.0
1.057HisPro: 1.057 ± 0.0
0.352HisGln: 0.352 ± 0.0
1.409HisArg: 1.409 ± 0.0
1.057HisSer: 1.057 ± 0.0
0.352HisThr: 0.352 ± 0.0
0.705HisVal: 0.705 ± 0.0
0.705HisTrp: 0.705 ± 0.0
0.352HisTyr: 0.352 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
4.933IleAla: 4.933 ± 0.0
1.409IleCys: 1.409 ± 0.0
4.228IleAsp: 4.228 ± 0.0
4.228IleGlu: 4.228 ± 0.0
3.524IlePhe: 3.524 ± 0.0
4.933IleGly: 4.933 ± 0.0
1.409IleHis: 1.409 ± 0.0
3.876IleIle: 3.876 ± 0.0
3.876IleLys: 3.876 ± 0.0
3.876IleLeu: 3.876 ± 0.0
1.409IleMet: 1.409 ± 0.0
3.524IleAsn: 3.524 ± 0.0
5.638IlePro: 5.638 ± 0.0
2.819IleGln: 2.819 ± 0.0
4.581IleArg: 4.581 ± 0.0
4.228IleSer: 4.228 ± 0.0
3.524IleThr: 3.524 ± 0.0
3.876IleVal: 3.876 ± 0.0
0.352IleTrp: 0.352 ± 0.0
2.819IleTyr: 2.819 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
2.819LysAla: 2.819 ± 0.0
1.057LysCys: 1.057 ± 0.0
3.171LysAsp: 3.171 ± 0.0
6.342LysGlu: 6.342 ± 0.0
3.524LysPhe: 3.524 ± 0.0
3.876LysGly: 3.876 ± 0.0
0.352LysHis: 0.352 ± 0.0
3.524LysIle: 3.524 ± 0.0
3.171LysLys: 3.171 ± 0.0
4.228LysLeu: 4.228 ± 0.0
1.762LysMet: 1.762 ± 0.0
3.524LysAsn: 3.524 ± 0.0
1.057LysPro: 1.057 ± 0.0
2.819LysGln: 2.819 ± 0.0
2.819LysArg: 2.819 ± 0.0
3.876LysSer: 3.876 ± 0.0
3.876LysThr: 3.876 ± 0.0
2.819LysVal: 2.819 ± 0.0
1.409LysTrp: 1.409 ± 0.0
1.762LysTyr: 1.762 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
4.581LeuAla: 4.581 ± 0.0
2.819LeuCys: 2.819 ± 0.0
3.876LeuAsp: 3.876 ± 0.0
3.171LeuGlu: 3.171 ± 0.0
2.467LeuPhe: 2.467 ± 0.0
5.285LeuGly: 5.285 ± 0.0
1.762LeuHis: 1.762 ± 0.0
4.228LeuIle: 4.228 ± 0.0
5.638LeuLys: 5.638 ± 0.0
4.933LeuLeu: 4.933 ± 0.0
0.705LeuMet: 0.705 ± 0.0
4.933LeuAsn: 4.933 ± 0.0
1.762LeuPro: 1.762 ± 0.0
2.114LeuGln: 2.114 ± 0.0
5.285LeuArg: 5.285 ± 0.0
8.809LeuSer: 8.809 ± 0.0
5.285LeuThr: 5.285 ± 0.0
7.4LeuVal: 7.4 ± 0.0
0.705LeuTrp: 0.705 ± 0.0
1.409LeuTyr: 1.409 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
1.409MetAla: 1.409 ± 0.0
0.705MetCys: 0.705 ± 0.0
2.114MetAsp: 2.114 ± 0.0
1.409MetGlu: 1.409 ± 0.0
0.352MetPhe: 0.352 ± 0.0
0.705MetGly: 0.705 ± 0.0
0.0MetHis: 0.0 ± 0.0
0.705MetIle: 0.705 ± 0.0
2.467MetLys: 2.467 ± 0.0
1.762MetLeu: 1.762 ± 0.0
0.352MetMet: 0.352 ± 0.0
0.705MetAsn: 0.705 ± 0.0
1.762MetPro: 1.762 ± 0.0
0.705MetGln: 0.705 ± 0.0
0.352MetArg: 0.352 ± 0.0
2.467MetSer: 2.467 ± 0.0
2.114MetThr: 2.114 ± 0.0
2.114MetVal: 2.114 ± 0.0
0.0MetTrp: 0.0 ± 0.0
1.057MetTyr: 1.057 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
1.762AsnAla: 1.762 ± 0.0
0.352AsnCys: 0.352 ± 0.0
2.467AsnAsp: 2.467 ± 0.0
3.876AsnGlu: 3.876 ± 0.0
1.762AsnPhe: 1.762 ± 0.0
3.171AsnGly: 3.171 ± 0.0
0.0AsnHis: 0.0 ± 0.0
4.933AsnIle: 4.933 ± 0.0
1.762AsnLys: 1.762 ± 0.0
5.285AsnLeu: 5.285 ± 0.0
1.762AsnMet: 1.762 ± 0.0
3.171AsnAsn: 3.171 ± 0.0
2.114AsnPro: 2.114 ± 0.0
2.819AsnGln: 2.819 ± 0.0
1.409AsnArg: 1.409 ± 0.0
3.876AsnSer: 3.876 ± 0.0
3.171AsnThr: 3.171 ± 0.0
2.114AsnVal: 2.114 ± 0.0
0.0AsnTrp: 0.0 ± 0.0
2.114AsnTyr: 2.114 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
1.762ProAla: 1.762 ± 0.0
0.352ProCys: 0.352 ± 0.0
2.114ProAsp: 2.114 ± 0.0
1.409ProGlu: 1.409 ± 0.0
2.819ProPhe: 2.819 ± 0.0
2.114ProGly: 2.114 ± 0.0
0.352ProHis: 0.352 ± 0.0
4.933ProIle: 4.933 ± 0.0
2.819ProLys: 2.819 ± 0.0
4.581ProLeu: 4.581 ± 0.0
1.409ProMet: 1.409 ± 0.0
3.524ProAsn: 3.524 ± 0.0
1.762ProPro: 1.762 ± 0.0
3.171ProGln: 3.171 ± 0.0
2.114ProArg: 2.114 ± 0.0
4.228ProSer: 4.228 ± 0.0
3.876ProThr: 3.876 ± 0.0
2.819ProVal: 2.819 ± 0.0
0.352ProTrp: 0.352 ± 0.0
1.057ProTyr: 1.057 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
2.467GlnAla: 2.467 ± 0.0
0.705GlnCys: 0.705 ± 0.0
1.762GlnAsp: 1.762 ± 0.0
1.762GlnGlu: 1.762 ± 0.0
3.524GlnPhe: 3.524 ± 0.0
4.581GlnGly: 4.581 ± 0.0
0.352GlnHis: 0.352 ± 0.0
1.057GlnIle: 1.057 ± 0.0
1.409GlnLys: 1.409 ± 0.0
1.409GlnLeu: 1.409 ± 0.0
0.705GlnMet: 0.705 ± 0.0
2.819GlnAsn: 2.819 ± 0.0
1.762GlnPro: 1.762 ± 0.0
1.409GlnGln: 1.409 ± 0.0
1.762GlnArg: 1.762 ± 0.0
3.876GlnSer: 3.876 ± 0.0
2.819GlnThr: 2.819 ± 0.0
3.524GlnVal: 3.524 ± 0.0
0.352GlnTrp: 0.352 ± 0.0
2.467GlnTyr: 2.467 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
3.524ArgAla: 3.524 ± 0.0
0.352ArgCys: 0.352 ± 0.0
2.819ArgAsp: 2.819 ± 0.0
5.285ArgGlu: 5.285 ± 0.0
3.171ArgPhe: 3.171 ± 0.0
1.409ArgGly: 1.409 ± 0.0
0.705ArgHis: 0.705 ± 0.0
3.524ArgIle: 3.524 ± 0.0
1.762ArgLys: 1.762 ± 0.0
3.171ArgLeu: 3.171 ± 0.0
2.467ArgMet: 2.467 ± 0.0
2.114ArgAsn: 2.114 ± 0.0
2.114ArgPro: 2.114 ± 0.0
1.057ArgGln: 1.057 ± 0.0
3.876ArgArg: 3.876 ± 0.0
3.876ArgSer: 3.876 ± 0.0
2.467ArgThr: 2.467 ± 0.0
2.467ArgVal: 2.467 ± 0.0
0.0ArgTrp: 0.0 ± 0.0
1.762ArgTyr: 1.762 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
4.228SerAla: 4.228 ± 0.0
0.352SerCys: 0.352 ± 0.0
5.285SerAsp: 5.285 ± 0.0
7.4SerGlu: 7.4 ± 0.0
3.876SerPhe: 3.876 ± 0.0
4.933SerGly: 4.933 ± 0.0
1.409SerHis: 1.409 ± 0.0
5.285SerIle: 5.285 ± 0.0
3.171SerLys: 3.171 ± 0.0
5.285SerLeu: 5.285 ± 0.0
2.819SerMet: 2.819 ± 0.0
4.228SerAsn: 4.228 ± 0.0
2.819SerPro: 2.819 ± 0.0
2.819SerGln: 2.819 ± 0.0
2.467SerArg: 2.467 ± 0.0
9.514SerSer: 9.514 ± 0.0
5.638SerThr: 5.638 ± 0.0
4.933SerVal: 4.933 ± 0.0
1.409SerTrp: 1.409 ± 0.0
3.524SerTyr: 3.524 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
5.285ThrAla: 5.285 ± 0.0
1.409ThrCys: 1.409 ± 0.0
3.171ThrAsp: 3.171 ± 0.0
4.228ThrGlu: 4.228 ± 0.0
1.409ThrPhe: 1.409 ± 0.0
2.819ThrGly: 2.819 ± 0.0
1.409ThrHis: 1.409 ± 0.0
4.933ThrIle: 4.933 ± 0.0
5.285ThrLys: 5.285 ± 0.0
6.342ThrLeu: 6.342 ± 0.0
0.0ThrMet: 0.0 ± 0.0
3.524ThrAsn: 3.524 ± 0.0
4.581ThrPro: 4.581 ± 0.0
3.876ThrGln: 3.876 ± 0.0
2.114ThrArg: 2.114 ± 0.0
4.228ThrSer: 4.228 ± 0.0
4.581ThrThr: 4.581 ± 0.0
4.228ThrVal: 4.228 ± 0.0
1.057ThrTrp: 1.057 ± 0.0
3.876ThrTyr: 3.876 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
4.228ValAla: 4.228 ± 0.0
1.762ValCys: 1.762 ± 0.0
4.581ValAsp: 4.581 ± 0.0
4.581ValGlu: 4.581 ± 0.0
3.876ValPhe: 3.876 ± 0.0
4.228ValGly: 4.228 ± 0.0
1.057ValHis: 1.057 ± 0.0
5.285ValIle: 5.285 ± 0.0
3.171ValLys: 3.171 ± 0.0
3.524ValLeu: 3.524 ± 0.0
1.409ValMet: 1.409 ± 0.0
1.409ValAsn: 1.409 ± 0.0
3.524ValPro: 3.524 ± 0.0
1.057ValGln: 1.057 ± 0.0
3.171ValArg: 3.171 ± 0.0
4.933ValSer: 4.933 ± 0.0
6.342ValThr: 6.342 ± 0.0
2.467ValVal: 2.467 ± 0.0
0.705ValTrp: 0.705 ± 0.0
2.819ValTyr: 2.819 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.705TrpAla: 0.705 ± 0.0
0.0TrpCys: 0.0 ± 0.0
0.705TrpAsp: 0.705 ± 0.0
0.0TrpGlu: 0.0 ± 0.0
0.352TrpPhe: 0.352 ± 0.0
0.352TrpGly: 0.352 ± 0.0
0.0TrpHis: 0.0 ± 0.0
0.0TrpIle: 0.0 ± 0.0
1.057TrpLys: 1.057 ± 0.0
1.057TrpLeu: 1.057 ± 0.0
0.0TrpMet: 0.0 ± 0.0
0.352TrpAsn: 0.352 ± 0.0
0.352TrpPro: 0.352 ± 0.0
0.0TrpGln: 0.0 ± 0.0
1.762TrpArg: 1.762 ± 0.0
0.352TrpSer: 0.352 ± 0.0
1.409TrpThr: 1.409 ± 0.0
1.409TrpVal: 1.409 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.352TrpTyr: 0.352 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.819TyrAla: 2.819 ± 0.0
1.057TyrCys: 1.057 ± 0.0
1.762TyrAsp: 1.762 ± 0.0
2.819TyrGlu: 2.819 ± 0.0
1.409TyrPhe: 1.409 ± 0.0
2.114TyrGly: 2.114 ± 0.0
1.057TyrHis: 1.057 ± 0.0
2.819TyrIle: 2.819 ± 0.0
1.057TyrLys: 1.057 ± 0.0
2.819TyrLeu: 2.819 ± 0.0
0.352TyrMet: 0.352 ± 0.0
3.876TyrAsn: 3.876 ± 0.0
1.409TyrPro: 1.409 ± 0.0
2.467TyrGln: 2.467 ± 0.0
1.762TyrArg: 1.762 ± 0.0
2.114TyrSer: 2.114 ± 0.0
1.762TyrThr: 1.762 ± 0.0
2.114TyrVal: 2.114 ± 0.0
0.352TyrTrp: 0.352 ± 0.0
3.171TyrTyr: 3.171 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2839 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski