Mucor ambiguus

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Fungi incertae sedis; Mucoromycota; Mucoromycotina; Mucoromycetes; Mucorales; Mucorineae; Mucoraceae; Mucor

Average proteome isoelectric point is 6.48

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 11311 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0C9MKJ6|A0A0C9MKJ6_9FUNG Within the bgcn gene intron protein OS=Mucor ambiguus OX=91626 GN=MAM1_0045c03112 PE=3 SV=1
MM1 pKa = 7.8IYY3 pKa = 10.75YY4 pKa = 10.43LFLIHH9 pKa = 7.38DD10 pKa = 4.01VNGDD14 pKa = 3.56GFLDD18 pKa = 3.83GHH20 pKa = 6.09EE21 pKa = 4.3LRR23 pKa = 11.84AAFTDD28 pKa = 4.18FGDD31 pKa = 3.68EE32 pKa = 4.79HH33 pKa = 7.27EE34 pKa = 5.84DD35 pKa = 3.15ATQYY39 pKa = 11.57LSLEE43 pKa = 4.47EE44 pKa = 3.92VTEE47 pKa = 4.26MVDD50 pKa = 4.02HH51 pKa = 6.57VLEE54 pKa = 4.46EE55 pKa = 5.28DD56 pKa = 4.67DD57 pKa = 5.1LDD59 pKa = 5.75GDD61 pKa = 4.74GRR63 pKa = 11.84ISWSEE68 pKa = 3.72YY69 pKa = 10.69LEE71 pKa = 4.35SQSYY75 pKa = 9.17HH76 pKa = 5.14QDD78 pKa = 2.99KK79 pKa = 11.27

Molecular weight: 9.22 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0C9MKN7|A0A0C9MKN7_9FUNG ATP dependent helicase OS=Mucor ambiguus OX=91626 GN=MAM1_0046d03142 PE=3 SV=1
MM1 pKa = 7.63GNTHH5 pKa = 5.46STTTRR10 pKa = 11.84RR11 pKa = 11.84HH12 pKa = 4.74AAPRR16 pKa = 11.84AVKK19 pKa = 8.93TRR21 pKa = 11.84KK22 pKa = 8.79SPRR25 pKa = 11.84RR26 pKa = 11.84FGLPSQKK33 pKa = 9.46RR34 pKa = 11.84AHH36 pKa = 6.55AAAPVAVKK44 pKa = 9.84PRR46 pKa = 11.84RR47 pKa = 11.84KK48 pKa = 9.73FGFGSSRR55 pKa = 11.84KK56 pKa = 8.39HH57 pKa = 4.37RR58 pKa = 11.84HH59 pKa = 4.38GAAPVATTTVPSNSMTLRR77 pKa = 11.84KK78 pKa = 9.52LKK80 pKa = 10.81AKK82 pKa = 10.19ISPGPKK88 pKa = 8.99VANTNKK94 pKa = 10.11RR95 pKa = 11.84SRR97 pKa = 11.84KK98 pKa = 8.03NAKK101 pKa = 9.01KK102 pKa = 10.49DD103 pKa = 3.49PVSGIVNKK111 pKa = 10.19LAPTVGATGASAAPRR126 pKa = 11.84HH127 pKa = 5.95RR128 pKa = 11.84SRR130 pKa = 11.84GFGFGRR136 pKa = 11.84RR137 pKa = 11.84RR138 pKa = 11.84PVEE141 pKa = 3.67PPITTKK147 pKa = 10.57RR148 pKa = 11.84GMFSRR153 pKa = 11.84FQRR156 pKa = 11.84ARR158 pKa = 11.84AYY160 pKa = 10.3

Molecular weight: 17.43 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

11311

0

11311

5257899

27

6210

464.8

52.21

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.274 ± 0.021

1.346 ± 0.008

5.83 ± 0.016

6.081 ± 0.025

3.869 ± 0.014

5.03 ± 0.022

2.665 ± 0.011

5.777 ± 0.017

6.108 ± 0.021

8.895 ± 0.022

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.501 ± 0.009

4.865 ± 0.015

4.946 ± 0.017

4.979 ± 0.027

4.78 ± 0.016

8.449 ± 0.031

6.274 ± 0.02

5.918 ± 0.017

1.112 ± 0.006

3.297 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski