Jungle carpet python virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Bornaviridae; Carbovirus; Queensland carbovirus

Average proteome isoelectric point is 7.05

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2K8MQI2|A0A2K8MQI2_9MONO N OS=Jungle carpet python virus OX=2016401 PE=4 SV=1
MM1 pKa = 7.81EE2 pKa = 5.03SRR4 pKa = 11.84STEE7 pKa = 3.84PPQEE11 pKa = 3.63VDD13 pKa = 3.18PLYY16 pKa = 11.02KK17 pKa = 10.29RR18 pKa = 11.84IPALEE23 pKa = 4.92GIPEE27 pKa = 4.17TLRR30 pKa = 11.84TQGQQLADD38 pKa = 3.71SEE40 pKa = 5.11APTEE44 pKa = 4.15MEE46 pKa = 4.06NEE48 pKa = 4.18SLEE51 pKa = 4.19VLHH54 pKa = 6.9EE55 pKa = 3.97KK56 pKa = 10.37AKK58 pKa = 9.92KK59 pKa = 9.33IKK61 pKa = 10.04RR62 pKa = 11.84KK63 pKa = 10.08RR64 pKa = 11.84EE65 pKa = 4.05TTDD68 pKa = 3.09PPSDD72 pKa = 3.7YY73 pKa = 11.1TSDD76 pKa = 4.65DD77 pKa = 4.63DD78 pKa = 6.31GDD80 pKa = 4.33LPDD83 pKa = 4.7PLVGKK88 pKa = 10.17VDD90 pKa = 4.54SIISKK95 pKa = 9.92IDD97 pKa = 3.42SLALLVDD104 pKa = 3.35KK105 pKa = 10.94RR106 pKa = 11.84FVLMEE111 pKa = 4.04EE112 pKa = 5.12KK113 pKa = 9.6IDD115 pKa = 4.05KK116 pKa = 9.73LQSDD120 pKa = 3.89IAYY123 pKa = 9.34LGSRR127 pKa = 11.84AAEE130 pKa = 3.9GRR132 pKa = 11.84PIQTPVQPFGPPTILPTAPSIYY154 pKa = 9.47PDD156 pKa = 4.3LPSSSWDD163 pKa = 3.55DD164 pKa = 3.58LGMM167 pKa = 4.7

Molecular weight: 18.5 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2K8MNI2|A0A2K8MNI2_9MONO P OS=Jungle carpet python virus OX=2016401 PE=4 SV=1
MM1 pKa = 7.99DD2 pKa = 3.29VTEE5 pKa = 5.11EE6 pKa = 3.74IRR8 pKa = 11.84VIAEE12 pKa = 4.36LIRR15 pKa = 11.84RR16 pKa = 11.84ARR18 pKa = 11.84LGDD21 pKa = 3.49GVEE24 pKa = 4.49VNRR27 pKa = 11.84TTPRR31 pKa = 11.84GRR33 pKa = 11.84PAVQADD39 pKa = 3.09SSTRR43 pKa = 11.84RR44 pKa = 11.84NTRR47 pKa = 11.84DD48 pKa = 3.46PEE50 pKa = 4.08DD51 pKa = 3.48TRR53 pKa = 11.84ATTRR57 pKa = 11.84RR58 pKa = 11.84LRR60 pKa = 11.84SSNRR64 pKa = 11.84DD65 pKa = 2.98GEE67 pKa = 4.38RR68 pKa = 11.84VTRR71 pKa = 11.84GIARR75 pKa = 11.84EE76 pKa = 3.92SEE78 pKa = 4.24EE79 pKa = 4.23NKK81 pKa = 10.74EE82 pKa = 3.9EE83 pKa = 4.13TRR85 pKa = 11.84DD86 pKa = 3.76NRR88 pKa = 11.84STEE91 pKa = 3.72

Molecular weight: 10.48 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

3007

91

1727

501.2

56.04

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.321 ± 0.734

2.361 ± 0.646

4.988 ± 0.868

4.955 ± 0.985

3.658 ± 0.573

5.454 ± 0.163

2.96 ± 0.573

6.718 ± 0.36

5.155 ± 0.39

10.941 ± 1.096

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.995 ± 0.308

3.558 ± 0.598

5.886 ± 0.974

3.691 ± 0.186

4.922 ± 1.127

9.112 ± 0.349

7.283 ± 0.827

6.518 ± 0.589

1.463 ± 0.222

3.06 ± 0.299
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski