Pistacia emaravirus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Fimoviridae; Emaravirus; unclassified Emaravirus

Average proteome isoelectric point is 6.47

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A410JAQ1|A0A410JAQ1_9VIRU p6 protein OS=Pistacia emaravirus OX=2507689 PE=4 SV=1
MM1 pKa = 7.49EE2 pKa = 5.01FKK4 pKa = 10.89SYY6 pKa = 10.77VRR8 pKa = 11.84TFNACRR14 pKa = 11.84KK15 pKa = 9.76GNVSDD20 pKa = 4.26YY21 pKa = 10.98YY22 pKa = 10.56IEE24 pKa = 5.06FDD26 pKa = 3.29HH27 pKa = 6.93QLFFSIVEE35 pKa = 4.07RR36 pKa = 11.84MDD38 pKa = 3.62TEE40 pKa = 4.11THH42 pKa = 5.97DD43 pKa = 3.06QFLRR47 pKa = 11.84FGEE50 pKa = 4.75LYY52 pKa = 10.65DD53 pKa = 5.43DD54 pKa = 4.5GNIDD58 pKa = 3.13IPEE61 pKa = 4.13IGRR64 pKa = 11.84TVNEE68 pKa = 4.26IVLDD72 pKa = 4.77DD73 pKa = 3.41ITIKK77 pKa = 10.35KK78 pKa = 9.99KK79 pKa = 10.18AMRR82 pKa = 11.84YY83 pKa = 7.34HH84 pKa = 6.22FRR86 pKa = 11.84YY87 pKa = 9.46IQILHH92 pKa = 6.77SILGIVDD99 pKa = 4.08AFNDD103 pKa = 3.44EE104 pKa = 4.3MSPDD108 pKa = 3.14FHH110 pKa = 9.21IFGTLVLKK118 pKa = 11.01NKK120 pKa = 9.77LLPFIPDD127 pKa = 3.25NSDD130 pKa = 3.49CLLLSFDD137 pKa = 4.93IIKK140 pKa = 10.59NLIWEE145 pKa = 4.23IVIGYY150 pKa = 9.72DD151 pKa = 4.03PIDD154 pKa = 3.95IIEE157 pKa = 4.56KK158 pKa = 9.63YY159 pKa = 10.19KK160 pKa = 10.75SRR162 pKa = 11.84QLKK165 pKa = 9.47SVIYY169 pKa = 10.88NEE171 pKa = 4.27DD172 pKa = 3.06TVAYY176 pKa = 8.84QFQVLAISYY185 pKa = 8.42LAIRR189 pKa = 11.84ASSMVDD195 pKa = 3.02KK196 pKa = 10.63EE197 pKa = 3.92KK198 pKa = 11.31SKK200 pKa = 11.24NKK202 pKa = 10.29SYY204 pKa = 11.38NDD206 pKa = 3.56SNQVTIEE213 pKa = 4.46DD214 pKa = 4.03GNKK217 pKa = 10.05LSEE220 pKa = 4.67LEE222 pKa = 4.19SDD224 pKa = 3.95SKK226 pKa = 11.5SIASSSHH233 pKa = 5.91QDD235 pKa = 3.35DD236 pKa = 4.76LMSKK240 pKa = 10.39

Molecular weight: 27.89 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A410JAN1|A0A410JAN1_9VIRU p5 variant B OS=Pistacia emaravirus OX=2507689 PE=4 SV=1
MM1 pKa = 7.49IHH3 pKa = 5.9NQIIKK8 pKa = 9.85KK9 pKa = 7.87QRR11 pKa = 11.84KK12 pKa = 7.22KK13 pKa = 10.8QLVSYY18 pKa = 9.43LAKK21 pKa = 9.74NANMEE26 pKa = 4.45HH27 pKa = 6.6IKK29 pKa = 10.43PYY31 pKa = 8.71TNSIGGCTIKK41 pKa = 10.72LSNKK45 pKa = 9.49EE46 pKa = 4.24KK47 pKa = 10.31ISDD50 pKa = 3.8YY51 pKa = 10.95KK52 pKa = 11.02GLSSFEE58 pKa = 4.05EE59 pKa = 4.17NIYY62 pKa = 10.72NQIKK66 pKa = 10.8NKK68 pKa = 9.95FNNCEE73 pKa = 4.1CFEE76 pKa = 4.74KK77 pKa = 10.89DD78 pKa = 3.47VFFDD82 pKa = 4.42EE83 pKa = 5.04DD84 pKa = 3.63SKK86 pKa = 11.03MPKK89 pKa = 9.36NASISYY95 pKa = 10.25IEE97 pKa = 5.18INDD100 pKa = 3.28QFPRR104 pKa = 11.84YY105 pKa = 8.62MYY107 pKa = 9.15TIKK110 pKa = 10.75KK111 pKa = 8.38MRR113 pKa = 11.84SKK115 pKa = 10.96YY116 pKa = 10.2KK117 pKa = 10.68YY118 pKa = 10.01SLTNIDD124 pKa = 5.17DD125 pKa = 4.36LLFSIIKK132 pKa = 9.51NHH134 pKa = 5.3LHH136 pKa = 5.61NFIIRR141 pKa = 11.84EE142 pKa = 4.01FEE144 pKa = 3.89SDD146 pKa = 3.04INEE149 pKa = 3.57INIIIKK155 pKa = 10.42GFLHH159 pKa = 6.54IPKK162 pKa = 9.4QFVMVKK168 pKa = 10.04INNKK172 pKa = 9.37NLLINDD178 pKa = 4.1TKK180 pKa = 11.43YY181 pKa = 10.07NWEE184 pKa = 4.39NIISSTTLCDD194 pKa = 3.34LRR196 pKa = 11.84SILSHH201 pKa = 6.77FDD203 pKa = 3.36DD204 pKa = 4.7MRR206 pKa = 11.84DD207 pKa = 3.62FYY209 pKa = 11.11YY210 pKa = 10.88KK211 pKa = 10.23KK212 pKa = 10.46VQGTNIVKK220 pKa = 10.32SIYY223 pKa = 10.91SFINDD228 pKa = 3.14NKK230 pKa = 10.92SLINHH235 pKa = 6.16VLPSIKK241 pKa = 9.69TSFKK245 pKa = 10.64TYY247 pKa = 10.46DD248 pKa = 3.61DD249 pKa = 4.44CVLKK253 pKa = 10.76YY254 pKa = 10.58INAHH258 pKa = 5.56LKK260 pKa = 9.61KK261 pKa = 10.49AYY263 pKa = 10.17NEE265 pKa = 4.38SNYY268 pKa = 11.04SLVFDD273 pKa = 4.3SSTIQEE279 pKa = 4.19FLIEE283 pKa = 4.37TEE285 pKa = 4.2SCSDD289 pKa = 3.58FSLEE293 pKa = 3.7VRR295 pKa = 11.84KK296 pKa = 9.98AIHH299 pKa = 6.69EE300 pKa = 4.35DD301 pKa = 3.14VTKK304 pKa = 10.54QLEE307 pKa = 4.21GLKK310 pKa = 8.49TQFSEE315 pKa = 4.11YY316 pKa = 10.42DD317 pKa = 3.4ILKK320 pKa = 8.92MPCLEE325 pKa = 4.6LVNQRR330 pKa = 11.84LVPIKK335 pKa = 10.52HH336 pKa = 6.31NKK338 pKa = 8.91NKK340 pKa = 10.48LNVSGSCEE348 pKa = 3.71QSVAFPLNIDD358 pKa = 4.52EE359 pKa = 4.35IVKK362 pKa = 9.98YY363 pKa = 10.11PPGEE367 pKa = 4.02NPIQDD372 pKa = 3.38NFYY375 pKa = 10.75YY376 pKa = 10.75GLPNTLEE383 pKa = 4.09ISTQYY388 pKa = 10.98LNSAMRR394 pKa = 11.84KK395 pKa = 9.36IIQEE399 pKa = 4.11EE400 pKa = 4.12KK401 pKa = 10.73DD402 pKa = 3.36IDD404 pKa = 4.92DD405 pKa = 3.56IDD407 pKa = 4.64YY408 pKa = 10.83IAGYY412 pKa = 8.27PFKK415 pKa = 10.43RR416 pKa = 11.84SYY418 pKa = 10.7KK419 pKa = 9.75ILIFSILKK427 pKa = 8.3KK428 pKa = 9.86QNYY431 pKa = 9.07NIRR434 pKa = 11.84ISHH437 pKa = 6.93LFLHH441 pKa = 5.91YY442 pKa = 10.19FCYY445 pKa = 10.56YY446 pKa = 9.47MYY448 pKa = 10.05AASVASIRR456 pKa = 11.84VGVDD460 pKa = 2.86MIYY463 pKa = 10.23EE464 pKa = 3.98QKK466 pKa = 10.82QIDD469 pKa = 3.75RR470 pKa = 11.84ARR472 pKa = 11.84EE473 pKa = 3.69FSKK476 pKa = 11.16KK477 pKa = 10.04NISVIRR483 pKa = 11.84NLVQSHH489 pKa = 5.55KK490 pKa = 10.53HH491 pKa = 5.96LFLQNQCVSITLAA504 pKa = 3.73

Molecular weight: 59.25 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8

0

8

5314

240

2299

664.3

77.28

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.632 ± 0.558

1.844 ± 0.37

6.361 ± 0.388

6.022 ± 0.481

4.686 ± 0.307

3.049 ± 0.44

2.465 ± 0.208

10.181 ± 0.502

8.863 ± 0.286

8.863 ± 0.554

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.011 ± 0.374

7.49 ± 0.396

3.105 ± 0.164

2.616 ± 0.256

3.406 ± 0.188

7.697 ± 0.42

5.702 ± 0.496

4.535 ± 0.457

0.452 ± 0.149

6.022 ± 0.515
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski