Ashy storm petrel gyrovirus

Taxonomy: Viruses; Anelloviridae; Gyrovirus; Gyrovirus hydho1

Average proteome isoelectric point is 8.41

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2Z4N430|A0A2Z4N430_9VIRU CA1 OS=Ashy storm petrel gyrovirus OX=2249930 PE=3 SV=1
MM1 pKa = 7.31SFSVLCRR8 pKa = 11.84DD9 pKa = 3.86TLRR12 pKa = 11.84GTLQYY17 pKa = 10.51NPKK20 pKa = 9.1YY21 pKa = 10.53QRR23 pKa = 11.84DD24 pKa = 3.41LANWFRR30 pKa = 11.84DD31 pKa = 3.42CSRR34 pKa = 11.84THH36 pKa = 7.06RR37 pKa = 11.84AICRR41 pKa = 11.84CPSYY45 pKa = 10.62RR46 pKa = 11.84NHH48 pKa = 6.55FKK50 pKa = 10.81APKK53 pKa = 8.97PQTQEE58 pKa = 4.0ASTQTEE64 pKa = 4.23RR65 pKa = 11.84PPKK68 pKa = 10.36SVTILPARR76 pKa = 11.84RR77 pKa = 11.84GILSSPKK84 pKa = 9.86DD85 pKa = 3.52RR86 pKa = 11.84SPGKK90 pKa = 9.91RR91 pKa = 11.84NKK93 pKa = 9.52ILHH96 pKa = 6.75FDD98 pKa = 3.68PFLNEE103 pKa = 3.85ALYY106 pKa = 10.35HH107 pKa = 5.3SKK109 pKa = 10.38RR110 pKa = 11.84RR111 pKa = 11.84RR112 pKa = 11.84KK113 pKa = 9.39QLLQEE118 pKa = 5.17RR119 pKa = 11.84PDD121 pKa = 3.16NWHH124 pKa = 6.93PLWEE128 pKa = 4.14ITPPLKK134 pKa = 10.78ACLDD138 pKa = 3.79FDD140 pKa = 4.19DD141 pKa = 5.02TEE143 pKa = 4.59EE144 pKa = 4.55DD145 pKa = 3.82TDD147 pKa = 4.1TSDD150 pKa = 4.34DD151 pKa = 3.95DD152 pKa = 4.58GGAGEE157 pKa = 5.13TDD159 pKa = 4.27DD160 pKa = 5.6EE161 pKa = 6.15DD162 pKa = 3.87DD163 pKa = 4.14TVPHH167 pKa = 6.46VDD169 pKa = 4.25FDD171 pKa = 3.57IGINGIVDD179 pKa = 5.14GIPPEE184 pKa = 4.38PSDD187 pKa = 3.63ASSSNRR193 pKa = 11.84TLEE196 pKa = 3.92QNPYY200 pKa = 10.25GLPNHH205 pKa = 5.74TTHH208 pKa = 7.15SEE210 pKa = 4.05LLSKK214 pKa = 10.82VLFSSHH220 pKa = 5.35KK221 pKa = 9.24QQ222 pKa = 3.17

Molecular weight: 25.36 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2Z4N434|A0A2Z4N434_9VIRU ORF3 OS=Ashy storm petrel gyrovirus OX=2249930 PE=4 SV=1
MM1 pKa = 7.41SRR3 pKa = 11.84FRR5 pKa = 11.84RR6 pKa = 11.84YY7 pKa = 9.48RR8 pKa = 11.84GRR10 pKa = 11.84YY11 pKa = 7.71GYY13 pKa = 10.45LGRR16 pKa = 11.84RR17 pKa = 11.84RR18 pKa = 11.84WRR20 pKa = 11.84WRR22 pKa = 11.84NRR24 pKa = 11.84RR25 pKa = 11.84RR26 pKa = 11.84RR27 pKa = 11.84RR28 pKa = 11.84YY29 pKa = 9.43RR30 pKa = 11.84PTRR33 pKa = 11.84RR34 pKa = 11.84LRR36 pKa = 11.84YY37 pKa = 8.22RR38 pKa = 11.84YY39 pKa = 9.59KK40 pKa = 10.2RR41 pKa = 11.84YY42 pKa = 9.79RR43 pKa = 11.84RR44 pKa = 11.84RR45 pKa = 11.84NSARR49 pKa = 11.84AIRR52 pKa = 11.84RR53 pKa = 11.84LFFKK57 pKa = 10.03PNPGTEE63 pKa = 4.14PVRR66 pKa = 11.84ITKK69 pKa = 9.79PYY71 pKa = 9.66NSLGVTFQGIILIPQTVAAWSLNVPQDD98 pKa = 3.16QTDD101 pKa = 3.37NYY103 pKa = 9.97ISSRR107 pKa = 11.84VAKK110 pKa = 10.09IDD112 pKa = 3.37VSFANLLRR120 pKa = 11.84AVLPLDD126 pKa = 4.27YY127 pKa = 9.85ISKK130 pKa = 10.18IGGPIPGRR138 pKa = 11.84LQSQVTGQPSDD149 pKa = 3.6TPPPKK154 pKa = 10.24TGWPYY159 pKa = 11.17AKK161 pKa = 10.38PMTQDD166 pKa = 2.92GQTPTSNPSEE176 pKa = 3.83WWRR179 pKa = 11.84WALLLMHH186 pKa = 6.9PTDD189 pKa = 3.3NVRR192 pKa = 11.84FLTTPQIMNTEE203 pKa = 3.84EE204 pKa = 3.94MGAMFAQYY212 pKa = 10.61QLLRR216 pKa = 11.84HH217 pKa = 5.94EE218 pKa = 4.45FTRR221 pKa = 11.84FKK223 pKa = 11.11VEE225 pKa = 4.59CIDD228 pKa = 4.95DD229 pKa = 5.02GGLKK233 pKa = 9.58WSPVASLAIQNQYY246 pKa = 9.83WEE248 pKa = 4.62IKK250 pKa = 10.25SNPTSPYY257 pKa = 7.29TAHH260 pKa = 7.01TIVQPGTQTEE270 pKa = 4.4IVNQATGPRR279 pKa = 11.84TPTDD283 pKa = 3.13QDD285 pKa = 3.76CPTRR289 pKa = 11.84QYY291 pKa = 11.33PRR293 pKa = 11.84YY294 pKa = 8.71LHH296 pKa = 6.72NGQTPDD302 pKa = 3.18KK303 pKa = 10.16LANTFSTILCKK314 pKa = 9.41EE315 pKa = 3.87TGYY318 pKa = 10.4IFPSFATLSAMGAPWAFPPQQKK340 pKa = 9.67PVGRR344 pKa = 11.84GSFNKK349 pKa = 10.14HH350 pKa = 4.65KK351 pKa = 10.43MKK353 pKa = 10.6GRR355 pKa = 11.84NDD357 pKa = 3.89PLKK360 pKa = 10.29GPWMTLLPKK369 pKa = 10.32NICNVSEE376 pKa = 4.16NEE378 pKa = 4.18MVGGDD383 pKa = 3.99LNTIIGTLFLAQGSNHH399 pKa = 4.21YY400 pKa = 6.7TTYY403 pKa = 11.57KK404 pKa = 10.12FMTMQDD410 pKa = 3.34TVQPLIMQTRR420 pKa = 11.84AWAAVKK426 pKa = 9.98IQSRR430 pKa = 11.84WTLANTRR437 pKa = 11.84RR438 pKa = 11.84PYY440 pKa = 10.42RR441 pKa = 11.84WDD443 pKa = 3.49VAWSNTTGKK452 pKa = 10.24FPQQ455 pKa = 3.75

Molecular weight: 52.64 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

869

90

455

217.3

24.84

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.674 ± 1.619

1.381 ± 0.387

4.948 ± 1.798

3.567 ± 0.92

3.567 ± 0.311

5.639 ± 0.603

2.647 ± 0.992

4.948 ± 0.348

4.488 ± 0.454

7.595 ± 0.948

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.956 ± 0.68

4.488 ± 0.655

8.861 ± 0.453

4.948 ± 0.825

10.127 ± 1.011

7.02 ± 1.211

8.285 ± 0.891

3.337 ± 0.761

2.186 ± 0.772

3.337 ± 0.811
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski