CRESS virus sp. ctWOo3

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; unclassified Cressdnaviricota; CRESS viruses

Average proteome isoelectric point is 6.14

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5Q2WC86|A0A5Q2WC86_9VIRU Putative capsid protein OS=CRESS virus sp. ctWOo3 OX=2656678 PE=4 SV=1
MM1 pKa = 7.88SDD3 pKa = 3.3RR4 pKa = 11.84LDD6 pKa = 3.46TVSISRR12 pKa = 11.84ACARR16 pKa = 11.84WLIDD20 pKa = 3.38YY21 pKa = 8.74GRR23 pKa = 11.84QLVNDD28 pKa = 5.65GYY30 pKa = 10.59GTDD33 pKa = 3.92YY34 pKa = 11.67DD35 pKa = 4.33PFNPVADD42 pKa = 5.05LEE44 pKa = 4.46PEE46 pKa = 4.15GAGFIDD52 pKa = 6.26DD53 pKa = 3.87IPMEE57 pKa = 4.55NGEE60 pKa = 3.99MWRR63 pKa = 11.84FMNALINFARR73 pKa = 11.84TVAGVLARR81 pKa = 11.84NMNDD85 pKa = 3.69PISPLTVSDD94 pKa = 5.45LFLEE98 pKa = 4.51DD99 pKa = 3.4EE100 pKa = 4.57KK101 pKa = 11.51EE102 pKa = 3.86II103 pKa = 4.59

Molecular weight: 11.6 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5Q2WC86|A0A5Q2WC86_9VIRU Putative capsid protein OS=CRESS virus sp. ctWOo3 OX=2656678 PE=4 SV=1
MM1 pKa = 7.43RR2 pKa = 11.84RR3 pKa = 11.84KK4 pKa = 10.42LFVSPFAKK12 pKa = 9.89PQGAVRR18 pKa = 11.84PNRR21 pKa = 11.84GQANKK26 pKa = 10.36KK27 pKa = 9.82SYY29 pKa = 9.57TYY31 pKa = 10.73RR32 pKa = 11.84KK33 pKa = 6.47NTRR36 pKa = 11.84RR37 pKa = 11.84KK38 pKa = 8.87FSPGGFDD45 pKa = 3.19TDD47 pKa = 3.02KK48 pKa = 10.58MLRR51 pKa = 11.84NHH53 pKa = 7.01IDD55 pKa = 3.21NVTKK59 pKa = 10.64KK60 pKa = 10.7SIEE63 pKa = 4.11RR64 pKa = 11.84QKK66 pKa = 11.03KK67 pKa = 8.73PSFDD71 pKa = 3.35SVAPFVEE78 pKa = 4.7EE79 pKa = 4.01KK80 pKa = 10.13RR81 pKa = 11.84RR82 pKa = 11.84KK83 pKa = 9.21RR84 pKa = 11.84DD85 pKa = 3.48FKK87 pKa = 10.84IRR89 pKa = 11.84TSVGTSFHH97 pKa = 6.86VGPIPPPANGTRR109 pKa = 11.84QDD111 pKa = 4.41DD112 pKa = 3.96SSDD115 pKa = 3.55DD116 pKa = 3.09TKK118 pKa = 10.64MIHH121 pKa = 5.91KK122 pKa = 10.31VEE124 pKa = 4.25VKK126 pKa = 10.23SIVMGSDD133 pKa = 3.47PSQEE137 pKa = 3.68FRR139 pKa = 11.84RR140 pKa = 11.84KK141 pKa = 9.71IEE143 pKa = 3.94TGRR146 pKa = 11.84PTTKK150 pKa = 10.54SLLRR154 pKa = 11.84AAKK157 pKa = 10.34EE158 pKa = 3.75NGTTRR163 pKa = 11.84RR164 pKa = 11.84IIYY167 pKa = 9.79DD168 pKa = 3.72SYY170 pKa = 11.77NSAITDD176 pKa = 3.61GLHH179 pKa = 5.66FTRR182 pKa = 11.84KK183 pKa = 8.92QLTVGTGFNQRR194 pKa = 11.84GFTVFGVPAYY204 pKa = 7.45MTYY207 pKa = 11.31GDD209 pKa = 4.31MLGITDD215 pKa = 3.82TNLNNTQSAFKK226 pKa = 9.71MQTLLAGIMSSKK238 pKa = 10.04TEE240 pKa = 3.73MLLRR244 pKa = 11.84NQSAHH249 pKa = 4.88LRR251 pKa = 11.84AYY253 pKa = 10.32VRR255 pKa = 11.84VHH257 pKa = 6.58LVSKK261 pKa = 10.73QCGEE265 pKa = 4.22VNDD268 pKa = 4.82PVLDD272 pKa = 3.56MSNNVSHH279 pKa = 7.16GDD281 pKa = 3.48VNAEE285 pKa = 4.77SIPADD290 pKa = 3.88LKK292 pKa = 10.17NKK294 pKa = 9.74RR295 pKa = 11.84MPVTYY300 pKa = 10.12QYY302 pKa = 11.06TDD304 pKa = 2.81NRR306 pKa = 11.84LEE308 pKa = 4.19TGSTGTVEE316 pKa = 4.8LFPPSRR322 pKa = 11.84TLSFDD327 pKa = 3.09TTTKK331 pKa = 11.03GNILGQSPYY340 pKa = 10.26FKK342 pKa = 10.9EE343 pKa = 3.91NFKK346 pKa = 10.49ICATVSQNLGPGDD359 pKa = 4.06FFRR362 pKa = 11.84FSHH365 pKa = 4.66VHH367 pKa = 5.82HH368 pKa = 6.79YY369 pKa = 11.2GSGFDD374 pKa = 3.78LANLYY379 pKa = 9.58SEE381 pKa = 5.08KK382 pKa = 10.84SLTGPDD388 pKa = 3.39DD389 pKa = 4.06PGYY392 pKa = 11.11AKK394 pKa = 8.32EE395 pKa = 3.86TSYY398 pKa = 11.12FYY400 pKa = 9.86IVEE403 pKa = 4.39YY404 pKa = 10.21KK405 pKa = 10.91GHH407 pKa = 5.89ICEE410 pKa = 4.33ATFNNAGAFEE420 pKa = 4.16ARR422 pKa = 11.84IGTAPVLLNAEE433 pKa = 3.87IRR435 pKa = 11.84KK436 pKa = 9.11SVRR439 pKa = 11.84FVNAPNSGQDD449 pKa = 3.21QTNSGVAPRR458 pKa = 11.84CLLRR462 pKa = 11.84VFEE465 pKa = 4.58QSSLPNIVEE474 pKa = 3.69QRR476 pKa = 11.84RR477 pKa = 11.84DD478 pKa = 3.69FNSDD482 pKa = 2.9LTNWTTVPTPALGLYY497 pKa = 9.19VIQLSSDD504 pKa = 3.06RR505 pKa = 11.84TLRR508 pKa = 11.84TEE510 pKa = 3.96VNQAGNSNATDD521 pKa = 3.45IVPP524 pKa = 3.84

Molecular weight: 58.55 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

932

103

524

310.7

35.32

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.721 ± 1.184

0.966 ± 0.164

7.296 ± 1.582

5.043 ± 0.719

5.687 ± 0.402

6.116 ± 0.837

1.395 ± 0.592

5.687 ± 1.164

6.223 ± 1.396

7.618 ± 0.885

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.682 ± 0.644

6.438 ± 0.241

5.043 ± 0.5

3.219 ± 0.664

6.545 ± 0.597

7.403 ± 0.807

6.974 ± 1.475

6.438 ± 0.219

0.966 ± 0.613

3.541 ± 0.33
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski