Anaerococcus vaginalis ATCC 51170

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Tissierellia; Tissierellales; Peptoniphilaceae; Anaerococcus; Anaerococcus vaginalis

Average proteome isoelectric point is 6.63

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1764 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|C7HTY6|C7HTY6_9FIRM S-adenosylmethionine:tRNA ribosyltransferase-isomerase OS=Anaerococcus vaginalis ATCC 51170 OX=655811 GN=queA PE=3 SV=1
MM1 pKa = 7.28SKK3 pKa = 10.49KK4 pKa = 10.74LEE6 pKa = 4.03IHH8 pKa = 4.66NHH10 pKa = 5.08EE11 pKa = 4.38IEE13 pKa = 4.06FEE15 pKa = 4.2KK16 pKa = 11.41NEE18 pKa = 3.73GKK20 pKa = 10.53AIIEE24 pKa = 4.19LQLDD28 pKa = 3.9EE29 pKa = 6.12NPIQCYY35 pKa = 10.28LIDD38 pKa = 3.98IFSVDD43 pKa = 3.38GVDD46 pKa = 4.39YY47 pKa = 10.77IALVDD52 pKa = 4.1SEE54 pKa = 4.21NSEE57 pKa = 4.91LIILLYY63 pKa = 10.33EE64 pKa = 4.49LEE66 pKa = 4.65DD67 pKa = 3.96EE68 pKa = 4.49EE69 pKa = 5.44SGEE72 pKa = 4.0IKK74 pKa = 10.79LNSLEE79 pKa = 5.7DD80 pKa = 3.8EE81 pKa = 4.92DD82 pKa = 5.48KK83 pKa = 11.28LDD85 pKa = 4.44EE86 pKa = 4.68IYY88 pKa = 10.89HH89 pKa = 6.22LFSHH93 pKa = 6.13YY94 pKa = 9.71WDD96 pKa = 4.16YY97 pKa = 11.28DD98 pKa = 3.9TIDD101 pKa = 4.44EE102 pKa = 4.51IVSEE106 pKa = 4.43YY107 pKa = 10.88EE108 pKa = 3.93SDD110 pKa = 5.67LEE112 pKa = 5.56DD113 pKa = 4.52SDD115 pKa = 5.89LNEE118 pKa = 4.01

Molecular weight: 13.91 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|C7HWC1|C7HWC1_9FIRM Oligopeptide ABC transporter permease protein AppB OS=Anaerococcus vaginalis ATCC 51170 OX=655811 GN=appB PE=3 SV=1
MM1 pKa = 7.35KK2 pKa = 9.4RR3 pKa = 11.84TYY5 pKa = 10.21QPNRR9 pKa = 11.84RR10 pKa = 11.84KK11 pKa = 9.94RR12 pKa = 11.84KK13 pKa = 8.48KK14 pKa = 9.79DD15 pKa = 2.78HH16 pKa = 6.25GFRR19 pKa = 11.84KK20 pKa = 10.0RR21 pKa = 11.84MSTPAGRR28 pKa = 11.84RR29 pKa = 11.84VLKK32 pKa = 10.45SRR34 pKa = 11.84RR35 pKa = 11.84QKK37 pKa = 10.59GRR39 pKa = 11.84KK40 pKa = 8.7KK41 pKa = 10.63LSAA44 pKa = 3.95

Molecular weight: 5.38 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1764

0

1764

562464

37

4748

318.9

36.3

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.234 ± 0.058

0.89 ± 0.024

6.584 ± 0.058

7.709 ± 0.067

4.84 ± 0.053

5.902 ± 0.068

1.191 ± 0.02

9.811 ± 0.079

10.534 ± 0.085

9.148 ± 0.064

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.463 ± 0.028

6.562 ± 0.06

2.533 ± 0.035

2.327 ± 0.032

3.221 ± 0.042

6.393 ± 0.043

4.315 ± 0.046

5.589 ± 0.052

0.547 ± 0.017

4.205 ± 0.046
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski