Odonata-associated circular virus-11

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 8.16

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0B4UH45|A0A0B4UH45_9VIRU Coat protein OS=Odonata-associated circular virus-11 OX=1592111 PE=4 SV=1
MM1 pKa = 6.92GHH3 pKa = 7.07EE4 pKa = 4.15IRR6 pKa = 11.84AKK8 pKa = 9.98SRR10 pKa = 11.84GWCFTLNNYY19 pKa = 10.41SNLEE23 pKa = 3.68ISEE26 pKa = 4.19LKK28 pKa = 10.71LRR30 pKa = 11.84FEE32 pKa = 4.18GAVWYY37 pKa = 10.02IIGEE41 pKa = 4.27EE42 pKa = 4.23VGLSGTPHH50 pKa = 6.17LQGAIYY56 pKa = 9.63YY57 pKa = 9.18KK58 pKa = 10.57NAVVMPKK65 pKa = 10.15FNPRR69 pKa = 11.84IHH71 pKa = 6.22WEE73 pKa = 3.85AMRR76 pKa = 11.84GNCQQSRR83 pKa = 11.84EE84 pKa = 4.18YY85 pKa = 10.55CSKK88 pKa = 10.62EE89 pKa = 3.81KK90 pKa = 11.11VLVEE94 pKa = 4.17YY95 pKa = 10.52GEE97 pKa = 4.46CPKK100 pKa = 10.51KK101 pKa = 10.79GKK103 pKa = 10.44RR104 pKa = 11.84SDD106 pKa = 3.24IKK108 pKa = 11.59SMVEE112 pKa = 3.59MLQAGATDD120 pKa = 3.39KK121 pKa = 10.82DD122 pKa = 3.28IYY124 pKa = 9.21MAHH127 pKa = 6.97GDD129 pKa = 3.2KK130 pKa = 10.77ALRR133 pKa = 11.84INGCLARR140 pKa = 11.84ARR142 pKa = 11.84ASLTEE147 pKa = 4.1VKK149 pKa = 10.42RR150 pKa = 11.84NWEE153 pKa = 3.61MDD155 pKa = 2.51IRR157 pKa = 11.84IYY159 pKa = 10.95YY160 pKa = 7.58GAPRR164 pKa = 11.84TGKK167 pKa = 7.55TRR169 pKa = 11.84AVYY172 pKa = 10.55EE173 pKa = 3.99EE174 pKa = 4.11FGIDD178 pKa = 3.24NVYY181 pKa = 11.28SKK183 pKa = 10.41MAGKK187 pKa = 8.48WWDD190 pKa = 3.69GYY192 pKa = 10.69RR193 pKa = 11.84GEE195 pKa = 4.39PCVLIDD201 pKa = 6.23DD202 pKa = 5.74FDD204 pKa = 4.2PQNCFDD210 pKa = 3.77IQYY213 pKa = 11.04DD214 pKa = 4.67FYY216 pKa = 11.79LKK218 pKa = 10.97LLDD221 pKa = 4.5RR222 pKa = 11.84YY223 pKa = 9.37PLRR226 pKa = 11.84IEE228 pKa = 4.12FKK230 pKa = 9.63GGSGEE235 pKa = 4.44FYY237 pKa = 10.66SKK239 pKa = 9.95TIILTSNFDD248 pKa = 3.52PAIWFTEE255 pKa = 3.91KK256 pKa = 10.82ANRR259 pKa = 11.84DD260 pKa = 3.29AFFEE264 pKa = 4.47RR265 pKa = 11.84IKK267 pKa = 10.11EE268 pKa = 3.65IRR270 pKa = 11.84YY271 pKa = 9.22FGGTEE276 pKa = 3.69VSGGNTSLLTPEE288 pKa = 4.72NKK290 pKa = 8.32PTYY293 pKa = 9.88EE294 pKa = 4.87GIGKK298 pKa = 9.62

Molecular weight: 34.31 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0B4UH45|A0A0B4UH45_9VIRU Coat protein OS=Odonata-associated circular virus-11 OX=1592111 PE=4 SV=1
MM1 pKa = 7.93PYY3 pKa = 10.35NRR5 pKa = 11.84RR6 pKa = 11.84RR7 pKa = 11.84TYY9 pKa = 9.77RR10 pKa = 11.84RR11 pKa = 11.84KK12 pKa = 9.28RR13 pKa = 11.84NYY15 pKa = 9.38RR16 pKa = 11.84RR17 pKa = 11.84KK18 pKa = 7.85TSRR21 pKa = 11.84ASIYY25 pKa = 10.63GRR27 pKa = 11.84AGRR30 pKa = 11.84QLWKK34 pKa = 10.47DD35 pKa = 3.33VKK37 pKa = 9.46TLKK40 pKa = 10.8NLINVEE46 pKa = 4.17WKK48 pKa = 9.55VQNHH52 pKa = 4.82VTTSTSVPNTGTVMLLNHH70 pKa = 7.02LALGEE75 pKa = 4.37DD76 pKa = 3.92YY77 pKa = 11.2NNRR80 pKa = 11.84SGRR83 pKa = 11.84QVRR86 pKa = 11.84WKK88 pKa = 10.22SLQWRR93 pKa = 11.84CTTQKK98 pKa = 10.26HH99 pKa = 5.41ASATSSRR106 pKa = 11.84VRR108 pKa = 11.84MLIVIDD114 pKa = 4.27RR115 pKa = 11.84QCKK118 pKa = 8.36QALPSASEE126 pKa = 3.96ILDD129 pKa = 3.5SSVAPLIDD137 pKa = 4.01GFRR140 pKa = 11.84QLDD143 pKa = 3.23ARR145 pKa = 11.84KK146 pKa = 9.82RR147 pKa = 11.84FVILKK152 pKa = 10.43DD153 pKa = 3.83VMFLLNNDD161 pKa = 3.48RR162 pKa = 11.84PEE164 pKa = 4.11LTKK167 pKa = 10.39TGYY170 pKa = 10.82FKK172 pKa = 10.58MDD174 pKa = 3.15MKK176 pKa = 10.35TVYY179 pKa = 10.14DD180 pKa = 3.95ASDD183 pKa = 3.36NGDD186 pKa = 3.06ITDD189 pKa = 3.91IYY191 pKa = 11.15SNSLYY196 pKa = 10.2MVMIGDD202 pKa = 4.0EE203 pKa = 4.31ATNQPTHH210 pKa = 5.29EE211 pKa = 4.4TNVRR215 pKa = 11.84LRR217 pKa = 11.84YY218 pKa = 9.35IDD220 pKa = 3.37NN221 pKa = 4.02

Molecular weight: 25.78 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

519

221

298

259.5

30.05

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.588 ± 0.348

1.734 ± 0.473

5.78 ± 0.575

5.973 ± 1.859

3.468 ± 0.946

7.129 ± 1.744

1.541 ± 0.153

6.166 ± 0.678

7.129 ± 0.453

7.322 ± 0.728

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.083 ± 0.306

5.78 ± 0.833

3.276 ± 0.32

2.89 ± 0.675

8.478 ± 1.359

5.973 ± 0.723

5.973 ± 1.239

5.202 ± 0.904

2.119 ± 0.177

5.395 ± 0.497
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski